RNA–Protein interactions for RNA: ENST00000446876.1

HDAC4-204, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-204ENST00000446876 H2BFMP0C1H6 154 aa12.56□□□□□ -0.4
HDAC4-204ENST00000446876 SLC15A1P46059 708 aa12.56□□□□□ -0.4
HDAC4-204ENST00000446876 GZMKP49863 264 aa12.56□□□□□ -0.4
HDAC4-204ENST00000446876 TMEM33P57088 247 aa12.56□□□□□ -0.4
HDAC4-204ENST00000446876 EFNB1P98172 346 aa12.56□□□□□ -0.4
HDAC4-204ENST00000446876 HFEQ30201 348 aa12.56□□□□□ -0.4
HDAC4-204ENST00000446876 LCN1P1Q5VSP4 162 aa12.56□□□□□ -0.4
HDAC4-204ENST00000446876 AADACL4Q5VUY2 407 aa12.56□□□□□ -0.4
HDAC4-204ENST00000446876 LRRN1Q6UXK5 716 aa12.56□□□□□ -0.4
HDAC4-204ENST00000446876 ZNF771Q7L3S4 317 aaPredicted RBP12.56□□□□□ -0.4
HDAC4-204ENST00000446876 SLC16A9Q7RTY1 509 aa12.56□□□□□ -0.4
HDAC4-204ENST00000446876 RFLNBQ8N5W9 214 aa12.56□□□□□ -0.4
HDAC4-204ENST00000446876 TMEM163Q8TC26 289 aa12.56□□□□□ -0.4
HDAC4-204ENST00000446876 POM121Q96HA1 1249 aa12.56□□□□□ -0.4
HDAC4-204ENST00000446876 OR2V2Q96R30 315 aa12.56□□□□□ -0.4
HDAC4-204ENST00000446876 DIRC2Q96SL1 478 aa12.56□□□□□ -0.4
HDAC4-204ENST00000446876 BRD7Q9NPI1 651 aa12.56□□□□□ -0.4
HDAC4-204ENST00000446876 ENOPH1Q9UHY7 261 aa12.56□□□□□ -0.4
HDAC4-204ENST00000446876 COPS3Q9UNS2 423 aa12.56□□□□□ -0.4
HDAC4-204ENST00000446876 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.56□□□□□ -0.46e-7■■■□□ 15.8
HDAC4-204ENST00000446876 PRR32B1ATL7 298 aa12.55□□□□□ -0.4
HDAC4-204ENST00000446876 CLDN25C9JDP6 229 aa12.55□□□□□ -0.4
HDAC4-204ENST00000446876 F5H5P2 479 aa12.55□□□□□ -0.4
HDAC4-204ENST00000446876 PSMD9O00233 223 aa12.55□□□□□ -0.4
HDAC4-204ENST00000446876 ALPLP05186 524 aa12.55□□□□□ -0.4
HDAC4-204ENST00000446876 SELEP16581 610 aa12.55□□□□□ -0.4
HDAC4-204ENST00000446876 TNFSF4P23510 183 aa12.55□□□□□ -0.4
HDAC4-204ENST00000446876 ZNF121P58317 390 aaPredicted RBP12.55□□□□□ -0.4
HDAC4-204ENST00000446876 ZIK1Q3SY52 487 aaPredicted RBP12.55□□□□□ -0.4
HDAC4-204ENST00000446876 FAM57BQ71RH2 274 aa12.55□□□□□ -0.4
HDAC4-204ENST00000446876 MEPCEQ7L2J0 689 aaKnown RBP12.55□□□□□ -0.4
HDAC4-204ENST00000446876 CBR4Q8N4T8 237 aa12.55□□□□□ -0.4
HDAC4-204ENST00000446876 ZNF454Q8N9F8 522 aa12.55□□□□□ -0.4
HDAC4-204ENST00000446876 DVL3Q92997 716 aaPredicted RBP12.55□□□□□ -0.4
HDAC4-204ENST00000446876 SLC30A2Q9BRI3 323 aa12.55□□□□□ -0.4
HDAC4-204ENST00000446876 TOR3AQ9H497 397 aa12.55□□□□□ -0.4
HDAC4-204ENST00000446876 USE1Q9NZ43 259 aa12.55□□□□□ -0.4
HDAC4-204ENST00000446876 ZNF319Q9P2F9 582 aa12.55□□□□□ -0.4
HDAC4-204ENST00000446876 LAMP5Q9UJQ1 280 aa12.55□□□□□ -0.4
HDAC4-204ENST00000446876 WIPI2Q9Y4P8 454 aa12.55□□□□□ -0.4
HDAC4-204ENST00000446876 LOC100289279A0A1B0GTE1 492 aa12.54□□□□□ -0.4
HDAC4-204ENST00000446876 GGT3PA6NGU5 568 aa12.54□□□□□ -0.4
HDAC4-204ENST00000446876 CD300LBA8K4G0 201 aa12.54□□□□□ -0.4
HDAC4-204ENST00000446876 A8MV72 311 aaPredicted RBP12.54□□□□□ -0.4
HDAC4-204ENST00000446876 ANKRD65E5RJM6 399 aa12.54□□□□□ -0.4
HDAC4-204ENST00000446876 ALOX5APP20292 161 aa12.54□□□□□ -0.4
HDAC4-204ENST00000446876 GFOD2Q3B7J2 385 aa12.54□□□□□ -0.4
HDAC4-204ENST00000446876 NXNL2Q5VZ03 156 aa12.54□□□□□ -0.4
HDAC4-204ENST00000446876 PRSS45Q7RTY3 260 aa12.54□□□□□ -0.4
HDAC4-204ENST00000446876 PQLC1Q8N2U9 271 aa12.54□□□□□ -0.4
HDAC4-204ENST00000446876 OR13G1Q8NGZ3 307 aa12.54□□□□□ -0.4
HDAC4-204ENST00000446876 SPRYD4Q8WW59 207 aaPredicted RBP12.54□□□□□ -0.4
HDAC4-204ENST00000446876 MEGF10Q96KG7 1140 aa12.54□□□□□ -0.4
HDAC4-204ENST00000446876 CNN2Q99439 309 aaKnown RBP12.54□□□□□ -0.4
HDAC4-204ENST00000446876 REPIN1Q9BWE0 567 aaKnown RBP12.54□□□□□ -0.4
HDAC4-204ENST00000446876 YIPF3Q9GZM5 350 aa12.54□□□□□ -0.4
HDAC4-204ENST00000446876 TMEM100Q9NV29 134 aa12.54□□□□□ -0.4
HDAC4-204ENST00000446876 H2AFY2Q9P0M6 372 aaPredicted RBP12.54□□□□□ -0.4
HDAC4-204ENST00000446876 IL19Q9UHD0 177 aa12.54□□□□□ -0.4
HDAC4-204ENST00000446876 LRP12Q9Y561 859 aa12.54□□□□□ -0.4
HDAC4-204ENST00000446876 FAM157AC9JC47 383 aa12.53□□□□□ -0.4
HDAC4-204ENST00000446876 APOL3O95236 402 aa12.53□□□□□ -0.4
HDAC4-204ENST00000446876 BAG2O95816 211 aa12.53□□□□□ -0.4
HDAC4-204ENST00000446876 TGFAP01135 160 aa12.53□□□□□ -0.4
HDAC4-204ENST00000446876 CA6P23280 308 aa12.53□□□□□ -0.4
HDAC4-204ENST00000446876 ALDH3A2P51648 485 aa12.53□□□□□ -0.4
HDAC4-204ENST00000446876 TIGD6Q17RP2 521 aa12.53□□□□□ -0.4
HDAC4-204ENST00000446876 KRT77Q7Z794 578 aa12.53□□□□□ -0.4
HDAC4-204ENST00000446876 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.53□□□□□ -0.4
HDAC4-204ENST00000446876 C10orf67Q8IYJ2 551 aa12.53□□□□□ -0.4
HDAC4-204ENST00000446876 OR56B2PQ8NGI1 322 aa12.53□□□□□ -0.4
HDAC4-204ENST00000446876 ZNF420Q8TAQ5 688 aaPredicted RBP12.53□□□□□ -0.4
HDAC4-204ENST00000446876 FAM81AQ8TBF8 368 aa12.53□□□□□ -0.4
HDAC4-204ENST00000446876 UBE2FQ969M7 185 aa12.53□□□□□ -0.4
HDAC4-204ENST00000446876 SGK3Q96BR1 496 aa12.53□□□□□ -0.4
HDAC4-204ENST00000446876 REEP6Q96HR9 211 aa12.53□□□□□ -0.4
HDAC4-204ENST00000446876 PGAM5Q96HS1 289 aa12.53□□□□□ -0.4
HDAC4-204ENST00000446876 MBOAT4Q96T53 435 aa12.53□□□□□ -0.4
HDAC4-204ENST00000446876 SLC29A1Q99808 456 aa12.53□□□□□ -0.4
HDAC4-204ENST00000446876 LPAR2Q9HBW0 351 aa12.53□□□□□ -0.4
HDAC4-204ENST00000446876 ADGRL4Q9HBW9 690 aa12.53□□□□□ -0.4
HDAC4-204ENST00000446876 TMEM106BQ9NUM4 274 aa12.53□□□□□ -0.4
HDAC4-204ENST00000446876 NIPBLQ6KC79 2804 aaeCLIP12.53□□□□□ -0.4
HDAC4-204ENST00000446876 NAV3Q8IVL0 2385 aa12.52□□□□□ -0.4
HDAC4-204ENST00000446876 ISPDA4D126 451 aa12.52□□□□□ -0.41
HDAC4-204ENST00000446876 SLC22A31A6NKX4 558 aa12.52□□□□□ -0.41
HDAC4-204ENST00000446876 MAGEB4O15481 346 aaPredicted RBP12.52□□□□□ -0.41
HDAC4-204ENST00000446876 XRCC2O43543 280 aa12.52□□□□□ -0.41
HDAC4-204ENST00000446876 TNFRSF1AP19438 455 aa12.52□□□□□ -0.41
HDAC4-204ENST00000446876 MMP16P51512 607 aa12.52□□□□□ -0.41
HDAC4-204ENST00000446876 CDH15P55291 814 aa12.52□□□□□ -0.41
HDAC4-204ENST00000446876 PSMA6P60900 246 aaKnown RBP12.52□□□□□ -0.41
HDAC4-204ENST00000446876 LMO4P61968 165 aa12.52□□□□□ -0.41
HDAC4-204ENST00000446876 PRAMEF6Q5VXH4 476 aa12.52□□□□□ -0.41
HDAC4-204ENST00000446876 FAM166AQ6J272 317 aa12.52□□□□□ -0.41
HDAC4-204ENST00000446876 MOGAT3Q86VF5 341 aa12.52□□□□□ -0.41
HDAC4-204ENST00000446876 GID4Q8IVV7 300 aa12.52□□□□□ -0.41
HDAC4-204ENST00000446876 SLC35F2Q8IXU6 374 aa12.52□□□□□ -0.41
HDAC4-204ENST00000446876 OR51G2Q8NGK0 314 aa12.52□□□□□ -0.41
HDAC4-204ENST00000446876 HPS1Q92902 700 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms