RNA–Protein interactions for RNA: ENST00000442708.5

USP39-205, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-205ENST00000442708 MYRFQ9Y2G1 1151 aa13.67□□□□□ -0.22
USP39-205ENST00000442708 VPS13CQ709C8 3753 aa13.67□□□□□ -0.22
USP39-205ENST00000442708 PHYHO14832 338 aa13.66□□□□□ -0.22
USP39-205ENST00000442708 TBX1O43435 398 aa13.66□□□□□ -0.22
USP39-205ENST00000442708 TIMM8AO60220 97 aaPredicted RBP13.66□□□□□ -0.22
USP39-205ENST00000442708 ZNF254O75437 659 aa13.66□□□□□ -0.22
USP39-205ENST00000442708 NCR1O76036 304 aa13.66□□□□□ -0.22
USP39-205ENST00000442708 F12P00748 615 aaPredicted RBP13.66□□□□□ -0.22
USP39-205ENST00000442708 MAGEB1P43366 347 aa13.66□□□□□ -0.22
USP39-205ENST00000442708 EFNA4P52798 201 aa13.66□□□□□ -0.22
USP39-205ENST00000442708 EGR3Q06889 387 aa13.66□□□□□ -0.22
USP39-205ENST00000442708 OR8B12Q8NGG6 310 aa13.66□□□□□ -0.22
USP39-205ENST00000442708 OR52I1Q8NGK6 324 aa13.66□□□□□ -0.22
USP39-205ENST00000442708 RNF166Q96A37 237 aaPredicted RBP13.66□□□□□ -0.22
USP39-205ENST00000442708 SPSB4Q96A44 273 aa13.66□□□□□ -0.22
USP39-205ENST00000442708 SGK3Q96BR1 496 aa13.66□□□□□ -0.22
USP39-205ENST00000442708 LYZL4Q96KX0 146 aa13.66□□□□□ -0.22
USP39-205ENST00000442708 ZNF649Q9BS31 505 aa13.66□□□□□ -0.22
USP39-205ENST00000442708 REPIN1Q9BWE0 567 aaKnown RBP13.66□□□□□ -0.22
USP39-205ENST00000442708 MROQ9BYG7 248 aa13.66□□□□□ -0.22
USP39-205ENST00000442708 RPL36Q9Y3U8 105 aaKnown RBP13.66□□□□□ -0.22
USP39-205ENST00000442708 HSPE1-MOB4S4R3N1 261 aa13.66□□□□□ -0.22
USP39-205ENST00000442708 SNTNA6NMZ2 147 aa13.65□□□□□ -0.22
USP39-205ENST00000442708 C17orf100A8MU93 164 aa13.65□□□□□ -0.22
USP39-205ENST00000442708 SSX4O60224 188 aa13.65□□□□□ -0.22
USP39-205ENST00000442708 IGHV1-46P01743 117 aa13.65□□□□□ -0.22
USP39-205ENST00000442708 IGHA1P01876 353 aa13.65□□□□□ -0.22
USP39-205ENST00000442708 APOC1P02654 83 aa13.65□□□□□ -0.22
USP39-205ENST00000442708 ZNF81P51508 661 aa13.65□□□□□ -0.22
USP39-205ENST00000442708 RIDAP52758 137 aaKnown RBP13.65□□□□□ -0.22
USP39-205ENST00000442708 MALLQ13021 153 aa13.65□□□□□ -0.22
USP39-205ENST00000442708 TNK1Q13470 666 aa13.65□□□□□ -0.22
USP39-205ENST00000442708 SPRNQ5BIV9 151 aa13.65□□□□□ -0.22
USP39-205ENST00000442708 DNM1P46Q6ZS02 220 aa13.65□□□□□ -0.22
USP39-205ENST00000442708 BHLHE23Q8NDY6 225 aa13.65□□□□□ -0.22
USP39-205ENST00000442708 PGAM5Q96HS1 289 aa13.65□□□□□ -0.22
USP39-205ENST00000442708 SOX7Q9BT81 388 aa13.65□□□□□ -0.22
USP39-205ENST00000442708 VCX3BQ9H321 246 aa13.65□□□□□ -0.22
USP39-205ENST00000442708 MS4A5Q9H3V2 200 aa13.65□□□□□ -0.22
USP39-205ENST00000442708 NIPAL2Q9H841 368 aa13.65□□□□□ -0.22
USP39-205ENST00000442708 TMEM269A0A1B0GVZ9 245 aa13.64□□□□□ -0.23
USP39-205ENST00000442708 DAPL1A0PJW8 107 aa13.64□□□□□ -0.23
USP39-205ENST00000442708 METTL15A6NJ78 407 aa13.64□□□□□ -0.23
USP39-205ENST00000442708 IQCF6A8MYZ5 107 aa13.64□□□□□ -0.23
USP39-205ENST00000442708 SPRY3O43610 288 aa13.64□□□□□ -0.23
USP39-205ENST00000442708 HPXP02790 462 aa13.64□□□□□ -0.23
USP39-205ENST00000442708 DCTDP32321 178 aa13.64□□□□□ -0.23
USP39-205ENST00000442708 RAB40BQ12829 278 aa13.64□□□□□ -0.23
USP39-205ENST00000442708 HNRNPA0Q13151 305 aaKnown RBP13.64□□□□□ -0.23
USP39-205ENST00000442708 MOGQ16653 247 aa13.64□□□□□ -0.23
USP39-205ENST00000442708 TP53I3Q53FA7 332 aa13.64□□□□□ -0.23
USP39-205ENST00000442708 PGAP1Q75T13 922 aa13.64□□□□□ -0.23
USP39-205ENST00000442708 MRPL21Q7Z2W9 205 aaKnown RBP13.64□□□□□ -0.23
USP39-205ENST00000442708 THAP5Q7Z6K1 395 aa13.64□□□□□ -0.23
USP39-205ENST00000442708 LHFPL3Q86UP9 236 aa13.64□□□□□ -0.23
USP39-205ENST00000442708 ACBD7Q8N6N7 88 aa13.64□□□□□ -0.23
USP39-205ENST00000442708 ZNF525Q8N782 197 aa13.64□□□□□ -0.23
USP39-205ENST00000442708 YIPF7Q8N8F6 280 aa13.64□□□□□ -0.23
USP39-205ENST00000442708 OR52H1Q8NGJ2 320 aa13.64□□□□□ -0.23
USP39-205ENST00000442708 RAB1BQ9H0U4 201 aa13.64□□□□□ -0.23
USP39-205ENST00000442708 GPR160Q9UJ42 338 aa13.64□□□□□ -0.23
USP39-205ENST00000442708 FBXO9Q9UK97 447 aaPredicted RBP13.64□□□□□ -0.23
USP39-205ENST00000442708 HIVEP1P15822 2718 aa13.64□□□□□ -0.23
USP39-205ENST00000442708 hCG_38984A0A1B0GV85 526 aa13.63□□□□□ -0.23
USP39-205ENST00000442708 CD300LBA8K4G0 201 aa13.63□□□□□ -0.23
USP39-205ENST00000442708 LYNX1G3V0Z9 82 aa13.63□□□□□ -0.23
USP39-205ENST00000442708 H0YL77 283 aa13.63□□□□□ -0.23
USP39-205ENST00000442708 XRCC2O43543 280 aa13.63□□□□□ -0.23
USP39-205ENST00000442708 XPNPEP2O43895 674 aa13.63□□□□□ -0.23
USP39-205ENST00000442708 RPP14O95059 124 aaKnown RBP13.63□□□□□ -0.23
USP39-205ENST00000442708 KRT8P05787 483 aa13.63□□□□□ -0.23
USP39-205ENST00000442708 LYNX1P0DP58 116 aa13.63□□□□□ -0.23
USP39-205ENST00000442708 RBMXP38159 391 aaKnown RBP13.63□□□□□ -0.23
USP39-205ENST00000442708 VHLP40337 213 aa13.63□□□□□ -0.23
USP39-205ENST00000442708 MMP16P51512 607 aa13.63□□□□□ -0.23
USP39-205ENST00000442708 OR12D2P58182 307 aa13.63□□□□□ -0.23
USP39-205ENST00000442708 ACTC1P68032 377 aa13.63□□□□□ -0.23
USP39-205ENST00000442708 ACTA1P68133 377 aa13.63□□□□□ -0.23
USP39-205ENST00000442708 CCL8P80075 99 aa13.63□□□□□ -0.23
USP39-205ENST00000442708 FAM3AP98173 230 aa13.63□□□□□ -0.23
USP39-205ENST00000442708 MVKQ03426 396 aa13.63□□□□□ -0.23
USP39-205ENST00000442708 TSTQ16762 297 aaKnown RBP13.63□□□□□ -0.23
USP39-205ENST00000442708 GFOD2Q3B7J2 385 aa13.63□□□□□ -0.23
USP39-205ENST00000442708 CDONQ4KMG0 1287 aa13.63□□□□□ -0.23
USP39-205ENST00000442708 LIPNQ5VXI9 398 aa13.63□□□□□ -0.23
USP39-205ENST00000442708 SHEQ5VZ18 495 aa13.63□□□□□ -0.23
USP39-205ENST00000442708 PRSS57Q6UWY2 283 aa13.63□□□□□ -0.23
USP39-205ENST00000442708 SPNS3Q6ZMD2 512 aa13.63□□□□□ -0.23
USP39-205ENST00000442708 OR8G5Q8NG78 346 aa13.63□□□□□ -0.23
USP39-205ENST00000442708 SNX33Q8WV41 574 aa13.63□□□□□ -0.23
USP39-205ENST00000442708 REEP6Q96HR9 211 aa13.63□□□□□ -0.23
USP39-205ENST00000442708 Q96MF0 132 aa13.63□□□□□ -0.23
USP39-205ENST00000442708 SIGLEC11Q96RL6 698 aa13.63□□□□□ -0.23
USP39-205ENST00000442708 PBOV1Q9GZY1 135 aa13.63□□□□□ -0.23
USP39-205ENST00000442708 OR10A2Q9H208 303 aa13.63□□□□□ -0.23
USP39-205ENST00000442708 BARX1Q9HBU1 254 aaPredicted RBP13.63□□□□□ -0.23
USP39-205ENST00000442708 FGF20Q9NP95 211 aaPredicted RBP13.63□□□□□ -0.23
USP39-205ENST00000442708 G6PC2Q9NQR9 355 aa13.63□□□□□ -0.23
USP39-205ENST00000442708 ACOXLQ9NUZ1 547 aa13.63□□□□□ -0.23
USP39-205ENST00000442708 PCDHGB5Q9Y5G0 923 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms