RNA–Protein interactions for RNA: ENST00000442054.5

CDC42BPA-208, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-208ENST00000442054 LRRC17Q8N6Y2 441 aa6.51□□□□□ -1.37
CDC42BPA-208ENST00000442054 OR2T27Q8NH04 317 aa6.51□□□□□ -1.37
CDC42BPA-208ENST00000442054 ZNF417Q8TAU3 575 aa6.51□□□□□ -1.37
CDC42BPA-208ENST00000442054 ALKBH3Q96Q83 286 aaPredicted RBP6.51□□□□□ -1.37
CDC42BPA-208ENST00000442054 ZNF587Q96SQ5 575 aaPredicted RBP6.51□□□□□ -1.37
CDC42BPA-208ENST00000442054 CA10Q9NS85 328 aa6.51□□□□□ -1.37
CDC42BPA-208ENST00000442054 Q9UFV3 132 aa6.51□□□□□ -1.37
CDC42BPA-208ENST00000442054 HSPB11Q9Y547 144 aa6.51□□□□□ -1.37
CDC42BPA-208ENST00000442054 DAPL1A0PJW8 107 aa6.51□□□□□ -1.37
CDC42BPA-208ENST00000442054 RCBTB2O95199 551 aa6.51□□□□□ -1.37
CDC42BPA-208ENST00000442054 IFNGP01579 166 aa6.51□□□□□ -1.37
CDC42BPA-208ENST00000442054 GYPBP06028 91 aa6.51□□□□□ -1.37
CDC42BPA-208ENST00000442054 CXCL2P19875 107 aa6.51□□□□□ -1.37
CDC42BPA-208ENST00000442054 PAICSP22234 425 aaKnown RBP6.51□□□□□ -1.37
CDC42BPA-208ENST00000442054 SLC6A9P48067 706 aa6.51□□□□□ -1.37
CDC42BPA-208ENST00000442054 MAP2K6P52564 334 aa6.51□□□□□ -1.37
CDC42BPA-208ENST00000442054 RAB25P57735 213 aa6.51□□□□□ -1.37
CDC42BPA-208ENST00000442054 TSC22D1Q15714 1073 aa6.51□□□□□ -1.37
CDC42BPA-208ENST00000442054 KLHL12Q53G59 568 aa6.51□□□□□ -1.37
CDC42BPA-208ENST00000442054 VWA1Q6PCB0 445 aa6.51□□□□□ -1.37
CDC42BPA-208ENST00000442054 ARL9Q6T311 187 aa6.51□□□□□ -1.37
CDC42BPA-208ENST00000442054 H1FNTQ75WM6 255 aaPredicted RBP6.51□□□□□ -1.37
CDC42BPA-208ENST00000442054 PRSS45Q7RTY3 260 aa6.51□□□□□ -1.37
CDC42BPA-208ENST00000442054 OR6K3Q8NGY3 331 aa6.51□□□□□ -1.37
CDC42BPA-208ENST00000442054 PHYHIPQ92561 330 aa6.51□□□□□ -1.37
CDC42BPA-208ENST00000442054 TBX5Q99593 518 aa6.51□□□□□ -1.37
CDC42BPA-208ENST00000442054 TMPRSS13Q9BYE2 586 aa6.51□□□□□ -1.37
CDC42BPA-208ENST00000442054 C20orf85Q9H1P6 137 aa6.51□□□□□ -1.37
CDC42BPA-208ENST00000442054 RANBP3Q9H6Z4 567 aaPredicted RBP6.51□□□□□ -1.37
CDC42BPA-208ENST00000442054 HRASLSQ9HDD0 168 aa6.51□□□□□ -1.37
CDC42BPA-208ENST00000442054 EXOSC3Q9NQT5 275 aaKnown RBP6.51□□□□□ -1.37
CDC42BPA-208ENST00000442054 MED9Q9NWA0 146 aa6.51□□□□□ -1.37
CDC42BPA-208ENST00000442054 COPZ2Q9P299 210 aa6.51□□□□□ -1.37
CDC42BPA-208ENST00000442054 ADAM30Q9UKF2 790 aa6.51□□□□□ -1.37
CDC42BPA-208ENST00000442054 MGAT4AQ9UM21 535 aa6.51□□□□□ -1.37
CDC42BPA-208ENST00000442054 A0A087WUJ7 227 aa6.5□□□□□ -1.37
CDC42BPA-208ENST00000442054 TEX13CA0A0J9YWL9 993 aa6.5□□□□□ -1.37
CDC42BPA-208ENST00000442054 PRR23D1E9PI22 279 aaPredicted RBP6.5□□□□□ -1.37
CDC42BPA-208ENST00000442054 AIPO00170 330 aa6.5□□□□□ -1.37
CDC42BPA-208ENST00000442054 MRPL3P09001 348 aaKnown RBP6.5□□□□□ -1.37
CDC42BPA-208ENST00000442054 PRR23D2P0DMB1 279 aaPredicted RBP6.5□□□□□ -1.37
CDC42BPA-208ENST00000442054 RRASP10301 218 aa6.5□□□□□ -1.37
CDC42BPA-208ENST00000442054 ZNF17P17021 662 aa6.5□□□□□ -1.37
CDC42BPA-208ENST00000442054 ACTC1P68032 377 aa6.5□□□□□ -1.37
CDC42BPA-208ENST00000442054 ACTA1P68133 377 aa6.5□□□□□ -1.37
CDC42BPA-208ENST00000442054 LTBQ06643 244 aa6.5□□□□□ -1.37
CDC42BPA-208ENST00000442054 FOXO1Q12778 655 aa6.5□□□□□ -1.37
CDC42BPA-208ENST00000442054 PLPPR5Q32ZL2 321 aa6.5□□□□□ -1.37
CDC42BPA-208ENST00000442054 RPL22L1Q6P5R6 122 aaKnown RBP6.5□□□□□ -1.37
CDC42BPA-208ENST00000442054 APOOLQ6UXV4 268 aa6.5□□□□□ -1.37
CDC42BPA-208ENST00000442054 BHLHA15Q7RTS1 189 aaPredicted RBP6.5□□□□□ -1.37
CDC42BPA-208ENST00000442054 SLC16A14Q7RTX9 510 aa6.5□□□□□ -1.37
CDC42BPA-208ENST00000442054 TIGD4Q8IY51 512 aa6.5□□□□□ -1.37
CDC42BPA-208ENST00000442054 CENPMQ9NSP4 180 aa6.5□□□□□ -1.37
CDC42BPA-208ENST00000442054 LAMP3Q9UQV4 416 aa6.5□□□□□ -1.37
CDC42BPA-208ENST00000442054 ABCA12Q86UK0 2595 aa6.5□□□□□ -1.37
CDC42BPA-208ENST00000442054 IFITM5A6NNB3 132 aa6.5□□□□□ -1.37
CDC42BPA-208ENST00000442054 SMAD7O15105 426 aaKnown RBP6.5□□□□□ -1.37
CDC42BPA-208ENST00000442054 ZNF250P15622 560 aa6.5□□□□□ -1.37
CDC42BPA-208ENST00000442054 ACVR1BP36896 505 aa6.5□□□□□ -1.37
CDC42BPA-208ENST00000442054 GDI2P50395 445 aaKnown RBP6.5□□□□□ -1.37
CDC42BPA-208ENST00000442054 FABP6P51161 128 aa6.5□□□□□ -1.37
CDC42BPA-208ENST00000442054 BIDP55957 195 aa6.5□□□□□ -1.37
CDC42BPA-208ENST00000442054 ATP5J2P56134 94 aa6.5□□□□□ -1.37
CDC42BPA-208ENST00000442054 EXOSC2Q13868 293 aaKnown RBP6.5□□□□□ -1.37
CDC42BPA-208ENST00000442054 PPA1Q15181 289 aa6.5□□□□□ -1.37
CDC42BPA-208ENST00000442054 CYB561A3Q8NBI2 242 aa6.5□□□□□ -1.37
CDC42BPA-208ENST00000442054 OR2T4Q8NH00 348 aa6.5□□□□□ -1.37
CDC42BPA-208ENST00000442054 LGALS14Q8TCE9 139 aa6.5□□□□□ -1.37
CDC42BPA-208ENST00000442054 FAM222BQ8WU58 562 aa6.5□□□□□ -1.37
CDC42BPA-208ENST00000442054 THEM6Q8WUY1 208 aa6.5□□□□□ -1.37
CDC42BPA-208ENST00000442054 OR14A2Q96R54 314 aa6.5□□□□□ -1.37
CDC42BPA-208ENST00000442054 OR5V1Q9UGF6 321 aa6.5□□□□□ -1.37
CDC42BPA-208ENST00000442054 PLEKHA6Q9Y2H5 1048 aa6.5□□□□□ -1.37
CDC42BPA-208ENST00000442054 A0A1W2PNV4 684 aa6.49□□□□□ -1.37
CDC42BPA-208ENST00000442054 TMEM200CA6NKL6 621 aa6.49□□□□□ -1.37
CDC42BPA-208ENST00000442054 SRSF10O75494 262 aaKnown RBP6.49□□□□□ -1.37
CDC42BPA-208ENST00000442054 MTRF1O75570 445 aaKnown RBP6.49□□□□□ -1.37
CDC42BPA-208ENST00000442054 ZFPL1O95159 310 aa6.49□□□□□ -1.37
CDC42BPA-208ENST00000442054 IGHG1P01857 330 aa6.49□□□□□ -1.37
CDC42BPA-208ENST00000442054 IGHG3P01860 377 aa6.49□□□□□ -1.37
CDC42BPA-208ENST00000442054 F13BP05160 661 aa6.49□□□□□ -1.37
CDC42BPA-208ENST00000442054 MELTFP08582 738 aa6.49□□□□□ -1.37
CDC42BPA-208ENST00000442054 ASAH2BP0C7U1 165 aa6.49□□□□□ -1.37
CDC42BPA-208ENST00000442054 SPI1P17947 270 aa6.49□□□□□ -1.37
CDC42BPA-208ENST00000442054 SRMP19623 302 aa6.49□□□□□ -1.37
CDC42BPA-208ENST00000442054 STOMP27105 288 aa6.49□□□□□ -1.37
CDC42BPA-208ENST00000442054 TIMP3P35625 211 aa6.49□□□□□ -1.37
CDC42BPA-208ENST00000442054 ADH7P40394 386 aa6.49□□□□□ -1.37
CDC42BPA-208ENST00000442054 MAGEB1P43366 347 aa6.49□□□□□ -1.37
CDC42BPA-208ENST00000442054 SLC3A1Q07837 685 aa6.49□□□□□ -1.37
CDC42BPA-208ENST00000442054 C2orf68Q2NKX9 166 aa6.49□□□□□ -1.37
CDC42BPA-208ENST00000442054 ALG10Q5BKT4 473 aa6.49□□□□□ -1.37
CDC42BPA-208ENST00000442054 SLC35D3Q5M8T2 416 aa6.49□□□□□ -1.37
CDC42BPA-208ENST00000442054 BAIAP2L2Q6UXY1 529 aa6.49□□□□□ -1.37
CDC42BPA-208ENST00000442054 OR10H4Q8NGA5 316 aa6.49□□□□□ -1.37
CDC42BPA-208ENST00000442054 OR56B4Q8NH76 319 aa6.49□□□□□ -1.37
CDC42BPA-208ENST00000442054 MCHR2Q969V1 340 aa6.49□□□□□ -1.37
CDC42BPA-208ENST00000442054 ADAD1Q96M93 576 aaKnown RBP6.49□□□□□ -1.37
CDC42BPA-208ENST00000442054 ZNF436Q9C0F3 470 aaPredicted RBP6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms