RNA–Protein interactions for RNA: ENST00000438552.6

SNRPB-202, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SNRPB, Length 1,008 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-202ENST00000438552 NIPAL2Q9H841 368 aa13.79□□□□□ -0.2
SNRPB-202ENST00000438552 BARX1Q9HBU1 254 aaPredicted RBP13.79□□□□□ -0.2
SNRPB-202ENST00000438552 MSL2Q9HCI7 577 aa13.79□□□□□ -0.2
SNRPB-202ENST00000438552 MRM2Q9UI43 246 aaKnown RBP13.79□□□□□ -0.2
SNRPB-202ENST00000438552 ITPR3Q14573 2671 aa13.79□□□□□ -0.2
SNRPB-202ENST00000438552 PLSCR5A0PG75 271 aa13.78□□□□□ -0.2
SNRPB-202ENST00000438552 C17orf100A8MU93 164 aa13.78□□□□□ -0.2
SNRPB-202ENST00000438552 H0YJX3 145 aa13.78□□□□□ -0.2
SNRPB-202ENST00000438552 J3QRE1 110 aa13.78□□□□□ -0.2
SNRPB-202ENST00000438552 XRCC2O43543 280 aa13.78□□□□□ -0.2
SNRPB-202ENST00000438552 ZNF254O75437 659 aa13.78□□□□□ -0.2
SNRPB-202ENST00000438552 NCR1O76036 304 aa13.78□□□□□ -0.2
SNRPB-202ENST00000438552 MT-ND5P03915 603 aa13.78□□□□□ -0.2
SNRPB-202ENST00000438552 ZNF81P51508 661 aa13.78□□□□□ -0.2
SNRPB-202ENST00000438552 EFNA4P52798 201 aa13.78□□□□□ -0.2
SNRPB-202ENST00000438552 EGR3Q06889 387 aa13.78□□□□□ -0.2
SNRPB-202ENST00000438552 SHEQ5VZ18 495 aa13.78□□□□□ -0.2
SNRPB-202ENST00000438552 PGAP1Q75T13 922 aa13.78□□□□□ -0.2
SNRPB-202ENST00000438552 MS4A5Q9H3V2 200 aa13.78□□□□□ -0.2
SNRPB-202ENST00000438552 FAM206AQ9NX38 181 aa13.78□□□□□ -0.2
SNRPB-202ENST00000438552 ZNF319Q9P2F9 582 aa13.78□□□□□ -0.2
SNRPB-202ENST00000438552 EXOGQ9Y2C4 368 aaKnown RBP13.78□□□□□ -0.2
SNRPB-202ENST00000438552 TANC2Q9HCD6 1990 aa13.78□□□□□ -0.2
SNRPB-202ENST00000438552 CREBBPQ92793 2442 aa13.78□□□□□ -0.2
SNRPB-202ENST00000438552 DAPL1A0PJW8 107 aa13.77□□□□□ -0.21
SNRPB-202ENST00000438552 SPRY3O43610 288 aa13.77□□□□□ -0.21
SNRPB-202ENST00000438552 LILRA1O75019 489 aa13.77□□□□□ -0.21
SNRPB-202ENST00000438552 KRT8P05787 483 aa13.77□□□□□ -0.21
SNRPB-202ENST00000438552 ERCC1P07992 297 aaPredicted RBP13.77□□□□□ -0.21
SNRPB-202ENST00000438552 MAGEB1P43366 347 aa13.77□□□□□ -0.21
SNRPB-202ENST00000438552 ACTC1P68032 377 aa13.77□□□□□ -0.21
SNRPB-202ENST00000438552 ACTA1P68133 377 aa13.77□□□□□ -0.21
SNRPB-202ENST00000438552 MOGQ16653 247 aa13.77□□□□□ -0.21
SNRPB-202ENST00000438552 TIGD6Q17RP2 521 aa13.77□□□□□ -0.21
SNRPB-202ENST00000438552 ZNF829Q3KNS6 432 aaPredicted RBP13.77□□□□□ -0.21
SNRPB-202ENST00000438552 Q6ZR03 302 aa13.77□□□□□ -0.21
SNRPB-202ENST00000438552 ZNF525Q8N782 197 aa13.77□□□□□ -0.21
SNRPB-202ENST00000438552 YIPF7Q8N8F6 280 aa13.77□□□□□ -0.21
SNRPB-202ENST00000438552 OR8B12Q8NGG6 310 aa13.77□□□□□ -0.21
SNRPB-202ENST00000438552 OR52H1Q8NGJ2 320 aa13.77□□□□□ -0.21
SNRPB-202ENST00000438552 OR52I1Q8NGK6 324 aa13.77□□□□□ -0.21
SNRPB-202ENST00000438552 Q96MF0 132 aa13.77□□□□□ -0.21
SNRPB-202ENST00000438552 RHNO1Q9BSD3 238 aa13.77□□□□□ -0.21
SNRPB-202ENST00000438552 OR10A2Q9H208 303 aa13.77□□□□□ -0.21
SNRPB-202ENST00000438552 SP140LQ9H930 580 aa13.77□□□□□ -0.21
SNRPB-202ENST00000438552 GTF2A1LQ9UNN4 478 aa13.77□□□□□ -0.21
SNRPB-202ENST00000438552 MYRFQ9Y2G1 1151 aa13.77□□□□□ -0.21
SNRPB-202ENST00000438552 RPL36Q9Y3U8 105 aaKnown RBP13.77□□□□□ -0.21
SNRPB-202ENST00000438552 HSPE1-MOB4S4R3N1 261 aa13.77□□□□□ -0.21
SNRPB-202ENST00000438552 TMEM269A0A1B0GVZ9 245 aa13.76□□□□□ -0.21
SNRPB-202ENST00000438552 IQCF6A8MYZ5 107 aa13.76□□□□□ -0.21
SNRPB-202ENST00000438552 SRSF10O75494 262 aaKnown RBP13.76□□□□□ -0.21
SNRPB-202ENST00000438552 PNPP00491 289 aa13.76□□□□□ -0.21
SNRPB-202ENST00000438552 F12P00748 615 aaPredicted RBP13.76□□□□□ -0.21
SNRPB-202ENST00000438552 IGHV1-46P01743 117 aa13.76□□□□□ -0.21
SNRPB-202ENST00000438552 CCL8P80075 99 aa13.76□□□□□ -0.21
SNRPB-202ENST00000438552 RAB40BQ12829 278 aa13.76□□□□□ -0.21
SNRPB-202ENST00000438552 CDK5R2Q13319 367 aa13.76□□□□□ -0.21
SNRPB-202ENST00000438552 TSTQ16762 297 aaKnown RBP13.76□□□□□ -0.21
SNRPB-202ENST00000438552 CLEC12BQ2HXU8 276 aa13.76□□□□□ -0.21
SNRPB-202ENST00000438552 TP53I3Q53FA7 332 aa13.76□□□□□ -0.21
SNRPB-202ENST00000438552 ZNF684Q5T5D7 378 aa13.76□□□□□ -0.21
SNRPB-202ENST00000438552 LAIR2Q6ISS4 152 aa13.76□□□□□ -0.21
SNRPB-202ENST00000438552 PRSS57Q6UWY2 283 aa13.76□□□□□ -0.21
SNRPB-202ENST00000438552 ACBD7Q8N6N7 88 aa13.76□□□□□ -0.21
SNRPB-202ENST00000438552 SPSB4Q96A44 273 aa13.76□□□□□ -0.21
SNRPB-202ENST00000438552 REEP6Q96HR9 211 aa13.76□□□□□ -0.21
SNRPB-202ENST00000438552 REPIN1Q9BWE0 567 aaKnown RBP13.76□□□□□ -0.21
SNRPB-202ENST00000438552 CYSLTR2Q9NS75 346 aa13.76□□□□□ -0.21
SNRPB-202ENST00000438552 CGGBP1Q9UFW8 167 aaPredicted RBP13.76□□□□□ -0.21
SNRPB-202ENST00000438552 GNG8Q9UK08 70 aa13.76□□□□□ -0.21
SNRPB-202ENST00000438552 METTL15A6NJ78 407 aa13.75□□□□□ -0.21
SNRPB-202ENST00000438552 LOC110117498-PIK3R3F6TDL0 507 aa13.75□□□□□ -0.21
SNRPB-202ENST00000438552 RPP14O95059 124 aaKnown RBP13.75□□□□□ -0.21
SNRPB-202ENST00000438552 IGHA1P01876 353 aa13.75□□□□□ -0.21
SNRPB-202ENST00000438552 HPXP02790 462 aa13.75□□□□□ -0.21
SNRPB-202ENST00000438552 SELEP16581 610 aa13.75□□□□□ -0.21
SNRPB-202ENST00000438552 DCTDP32321 178 aa13.75□□□□□ -0.21
SNRPB-202ENST00000438552 VHLP40337 213 aa13.75□□□□□ -0.21
SNRPB-202ENST00000438552 CARTPTQ16568 116 aa13.75□□□□□ -0.21
SNRPB-202ENST00000438552 ZMAT1Q5H9K5 638 aa13.75□□□□□ -0.21
SNRPB-202ENST00000438552 FAM220AQ7Z4H9 259 aa13.75□□□□□ -0.21
SNRPB-202ENST00000438552 THAP5Q7Z6K1 395 aa13.75□□□□□ -0.21
SNRPB-202ENST00000438552 OR8G5Q8NG78 346 aa13.75□□□□□ -0.21
SNRPB-202ENST00000438552 OR10AD1Q8NGE0 317 aa13.75□□□□□ -0.21
SNRPB-202ENST00000438552 OR56B2PQ8NGI1 322 aa13.75□□□□□ -0.21
SNRPB-202ENST00000438552 FBLIM1Q8WUP2 373 aa13.75□□□□□ -0.21
SNRPB-202ENST00000438552 NEU4Q8WWR8 484 aaPredicted RBP13.75□□□□□ -0.21
SNRPB-202ENST00000438552 SGK3Q96BR1 496 aa13.75□□□□□ -0.21
SNRPB-202ENST00000438552 LYZL4Q96KX0 146 aa13.75□□□□□ -0.21
SNRPB-202ENST00000438552 PBOV1Q9GZY1 135 aa13.75□□□□□ -0.21
SNRPB-202ENST00000438552 OPA3Q9H6K4 179 aa13.75□□□□□ -0.21
SNRPB-202ENST00000438552 ACOXLQ9NUZ1 547 aa13.75□□□□□ -0.21
SNRPB-202ENST00000438552 MRPS18AQ9NVS2 196 aaKnown RBP13.75□□□□□ -0.21
SNRPB-202ENST00000438552 PCDHGB1Q9Y5G3 927 aa13.75□□□□□ -0.21
SNRPB-202ENST00000438552 R4GMQ9 66 aa13.75□□□□□ -0.21
SNRPB-202ENST00000438552 hCG_38984A0A1B0GV85 526 aa13.74□□□□□ -0.21
SNRPB-202ENST00000438552 TRIM64A6NGJ6 449 aa13.74□□□□□ -0.21
SNRPB-202ENST00000438552 GGT3PA6NGU5 568 aa13.74□□□□□ -0.21
SNRPB-202ENST00000438552 TRIM64BA6NI03 449 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms