RNA–Protein interactions for RNA: ENST00000432425.5

CLK1-204, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-204ENST00000432425 TNFRSF9Q07011 255 aa2.03□□□□□ -2.08
CLK1-204ENST00000432425 KLRB1Q12918 225 aa2.03□□□□□ -2.08
CLK1-204ENST00000432425 DYNC1I2Q13409 638 aaKnown RBP2.03□□□□□ -2.08
CLK1-204ENST00000432425 GANABQ14697 944 aaKnown RBP2.03□□□□□ -2.08
CLK1-204ENST00000432425 ZNF630Q2M218 657 aaPredicted RBP2.03□□□□□ -2.08
CLK1-204ENST00000432425 FAM74A3Q4VXF1 159 aa2.03□□□□□ -2.08
CLK1-204ENST00000432425 BEND3Q5T5X7 828 aa2.03□□□□□ -2.08
CLK1-204ENST00000432425 IDNKQ5T6J7 187 aa2.03□□□□□ -2.08
CLK1-204ENST00000432425 LRRN1Q6UXK5 716 aa2.03□□□□□ -2.08
CLK1-204ENST00000432425 LANCL3Q6ZV70 420 aa2.03□□□□□ -2.08
CLK1-204ENST00000432425 AHSA2Q719I0 299 aa2.03□□□□□ -2.08
CLK1-204ENST00000432425 SLC16A14Q7RTX9 510 aa2.03□□□□□ -2.08
CLK1-204ENST00000432425 HDDC2Q7Z4H3 204 aa2.03□□□□□ -2.08
CLK1-204ENST00000432425 UNC93AQ86WB7 457 aa2.03□□□□□ -2.08
CLK1-204ENST00000432425 TMEM25Q86YD3 366 aa2.03□□□□□ -2.08
CLK1-204ENST00000432425 BBS7Q8IWZ6 715 aa2.03□□□□□ -2.08
CLK1-204ENST00000432425 H1FOOQ8IZA3 346 aaPredicted RBP2.03□□□□□ -2.08
CLK1-204ENST00000432425 PUSL1Q8N0Z8 303 aaKnown RBP2.03□□□□□ -2.08
CLK1-204ENST00000432425 STK40Q8N2I9 435 aa2.03□□□□□ -2.08
CLK1-204ENST00000432425 RIBC1Q8N443 379 aaPredicted RBP2.03□□□□□ -2.08
CLK1-204ENST00000432425 ARIH2OSQ8N7S6 290 aa2.03□□□□□ -2.08
CLK1-204ENST00000432425 MDS2Q8NDY4 140 aa2.03□□□□□ -2.08
CLK1-204ENST00000432425 OR10A7Q8NGE5 316 aa2.03□□□□□ -2.08
CLK1-204ENST00000432425 OR56A4Q8NGH8 313 aa2.03□□□□□ -2.08
CLK1-204ENST00000432425 OR2A12Q8NGT7 310 aa2.03□□□□□ -2.08
CLK1-204ENST00000432425 OR11L1Q8NGX0 322 aa2.03□□□□□ -2.08
CLK1-204ENST00000432425 KCTD4Q8WVF5 259 aa2.03□□□□□ -2.08
CLK1-204ENST00000432425 RASSF5Q8WWW0 418 aa2.03□□□□□ -2.08
CLK1-204ENST00000432425 MAFIPQ8WZ33 124 aa2.03□□□□□ -2.08
CLK1-204ENST00000432425 CDS1Q92903 461 aa2.03□□□□□ -2.08
CLK1-204ENST00000432425 MYDGFQ969H8 173 aa2.03□□□□□ -2.08
CLK1-204ENST00000432425 BORCS5Q969J3 196 aa2.03□□□□□ -2.08
CLK1-204ENST00000432425 WDR34Q96EX3 536 aa2.03□□□□□ -2.08
CLK1-204ENST00000432425 CELF6Q96J87 481 aaKnown RBP2.03□□□□□ -2.08
CLK1-204ENST00000432425 OLFM3Q96PB7 478 aa2.03□□□□□ -2.08
CLK1-204ENST00000432425 TEAD3Q99594 435 aa2.03□□□□□ -2.08
CLK1-204ENST00000432425 NRTNQ99748 197 aa2.03□□□□□ -2.08
CLK1-204ENST00000432425 PCBD2Q9H0N5 130 aa2.03□□□□□ -2.08
CLK1-204ENST00000432425 PORCNQ9H237 461 aa2.03□□□□□ -2.08
CLK1-204ENST00000432425 OR51M1Q9H341 326 aa2.03□□□□□ -2.08
CLK1-204ENST00000432425 ANKRD19PQ9H560 264 aa2.03□□□□□ -2.08
CLK1-204ENST00000432425 KIR3DX1Q9H7L2 352 aa2.03□□□□□ -2.08
CLK1-204ENST00000432425 FBXO8Q9NRD0 319 aa2.03□□□□□ -2.08
CLK1-204ENST00000432425 RMND1Q9NWS8 449 aa2.03□□□□□ -2.08
CLK1-204ENST00000432425 MAT2BQ9NZL9 334 aa2.03□□□□□ -2.08
CLK1-204ENST00000432425 GALPQ9UBC7 116 aa2.03□□□□□ -2.08
CLK1-204ENST00000432425 KIF25Q9UIL4 384 aa2.03□□□□□ -2.08
CLK1-204ENST00000432425 TMCO1Q9UM00 188 aa2.03□□□□□ -2.08
CLK1-204ENST00000432425 NDUFAF1Q9Y375 327 aa2.03□□□□□ -2.08
CLK1-204ENST00000432425 FAM32AQ9Y421 112 aaKnown RBP2.03□□□□□ -2.08
CLK1-204ENST00000432425 FADS3Q9Y5Q0 445 aa2.03□□□□□ -2.08
CLK1-204ENST00000432425 ALG6Q9Y672 507 aa2.03□□□□□ -2.08
CLK1-204ENST00000432425 CDH10Q9Y6N8 788 aa2.03□□□□□ -2.08
CLK1-204ENST00000432425 V9GYY9 64 aa2.03□□□□□ -2.08
CLK1-204ENST00000432425 MYH10P35580 1976 aa2.03□□□□□ -2.08
CLK1-204ENST00000432425 ZBED9Q6R2W3 1325 aa2.03□□□□□ -2.08
CLK1-204ENST00000432425 MTCL1Q9Y4B5 1905 aaKnown RBP2.03□□□□□ -2.08
CLK1-204ENST00000432425 PNPLA6Q8IY17 1366 aa2.03□□□□□ -2.09
CLK1-204ENST00000432425 RAB3GAP2Q9H2M9 1393 aa2.03□□□□□ -2.09
CLK1-204ENST00000432425 IGKV2D-24A0A075B6R9 120 aa2.02□□□□□ -2.09
CLK1-204ENST00000432425 EFCAB10A6NFE3 127 aa2.02□□□□□ -2.09
CLK1-204ENST00000432425 ZNF233A6NK53 670 aa2.02□□□□□ -2.09
CLK1-204ENST00000432425 H3BTX0 84 aa2.02□□□□□ -2.09
CLK1-204ENST00000432425 CLDN34H7C241 214 aa2.02□□□□□ -2.09
CLK1-204ENST00000432425 M0R3G1 203 aa2.02□□□□□ -2.09
CLK1-204ENST00000432425 KPNA3O00505 521 aaPredicted RBP2.02□□□□□ -2.09
CLK1-204ENST00000432425 PPP1R2P9O14990 202 aa2.02□□□□□ -2.09
CLK1-204ENST00000432425 TGOLN2O43493 480 aa2.02□□□□□ -2.09
CLK1-204ENST00000432425 DPM1O60762 260 aa2.02□□□□□ -2.09
CLK1-204ENST00000432425 DIRAS1O95057 198 aa2.02□□□□□ -2.09
CLK1-204ENST00000432425 FARS2O95363 451 aaKnown RBP2.02□□□□□ -2.09
CLK1-204ENST00000432425 TDP2O95551 362 aa2.02□□□□□ -2.09
CLK1-204ENST00000432425 TMEM50AO95807 157 aa2.02□□□□□ -2.09
CLK1-204ENST00000432425 CD160O95971 181 aa2.02□□□□□ -2.09
CLK1-204ENST00000432425 CALB1P05937 261 aa2.02□□□□□ -2.09
CLK1-204ENST00000432425 PGCP20142 388 aa2.02□□□□□ -2.09
CLK1-204ENST00000432425 BGNP21810 368 aa2.02□□□□□ -2.09
CLK1-204ENST00000432425 GYG1P46976 350 aa2.02□□□□□ -2.09
CLK1-204ENST00000432425 QARSP47897 775 aaKnown RBP2.02□□□□□ -2.09
CLK1-204ENST00000432425 RBX1P62877 108 aa2.02□□□□□ -2.09
CLK1-204ENST00000432425 KCNJ2P63252 427 aa2.02□□□□□ -2.09
CLK1-204ENST00000432425 MRPS11P82912 194 aaKnown RBP2.02□□□□□ -2.09
CLK1-204ENST00000432425 C2orf80Q0P641 193 aa2.02□□□□□ -2.09
CLK1-204ENST00000432425 ZNF154Q13106 437 aa2.02□□□□□ -2.09
CLK1-204ENST00000432425 MAD2L1BPQ15013 274 aaPredicted RBP2.02□□□□□ -2.09
CLK1-204ENST00000432425 IRF4Q15306 451 aa2.02□□□□□ -2.09
CLK1-204ENST00000432425 SLC25A52Q3SY17 297 aa2.02□□□□□ -2.09
CLK1-204ENST00000432425 VPS26BQ4G0F5 336 aa2.02□□□□□ -2.09
CLK1-204ENST00000432425 DMRTC1Q5HYR2 192 aa2.02□□□□□ -2.09
CLK1-204ENST00000432425 GCSAMLQ5JQS6 135 aa2.02□□□□□ -2.09
CLK1-204ENST00000432425 TEX30Q5JUR7 227 aa2.02□□□□□ -2.09
CLK1-204ENST00000432425 C22orf42Q6IC83 251 aa2.02□□□□□ -2.09
CLK1-204ENST00000432425 ACSM5Q6NUN0 579 aa2.02□□□□□ -2.09
CLK1-204ENST00000432425 ENPP6Q6UWR7 440 aa2.02□□□□□ -2.09
CLK1-204ENST00000432425 C5orf46Q6UWT4 87 aa2.02□□□□□ -2.09
CLK1-204ENST00000432425 TMPRSS11AQ6ZMR5 421 aa2.02□□□□□ -2.09
CLK1-204ENST00000432425 DNM1P46Q6ZS02 220 aa2.02□□□□□ -2.09
CLK1-204ENST00000432425 ANKRD37Q7Z713 158 aa2.02□□□□□ -2.09
CLK1-204ENST00000432425 LYG2Q86SG7 212 aa2.02□□□□□ -2.09
CLK1-204ENST00000432425 RALGPS2Q86X27 583 aaPredicted RBP2.02□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms