RNA–Protein interactions for RNA: ENST00000428696.6

SGCE-204, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,409 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-204ENST00000428696 METTL15A6NJ78 407 aa12.45□□□□□ -0.42
SGCE-204ENST00000428696 J3QLW9 94 aa12.45□□□□□ -0.42
SGCE-204ENST00000428696 ICMTO60725 284 aa12.45□□□□□ -0.42
SGCE-204ENST00000428696 WBP4O75554 376 aaKnown RBP12.45□□□□□ -0.42
SGCE-204ENST00000428696 F12P00748 615 aaPredicted RBP12.45□□□□□ -0.42
SGCE-204ENST00000428696 ZNF19P17023 458 aa12.45□□□□□ -0.42
SGCE-204ENST00000428696 OTX1P32242 354 aaPredicted RBP12.45□□□□□ -0.42
SGCE-204ENST00000428696 VHLP40337 213 aa12.45□□□□□ -0.42
SGCE-204ENST00000428696 PPOXP50336 477 aa12.45□□□□□ -0.42
SGCE-204ENST00000428696 EFNA4P52798 201 aa12.45□□□□□ -0.42
SGCE-204ENST00000428696 ISL1P61371 349 aa12.45□□□□□ -0.42
SGCE-204ENST00000428696 ACTC1P68032 377 aa12.45□□□□□ -0.42
SGCE-204ENST00000428696 ACTA1P68133 377 aa12.45□□□□□ -0.42
SGCE-204ENST00000428696 CCL8P80075 99 aa12.45□□□□□ -0.42
SGCE-204ENST00000428696 ROM1Q03395 351 aa12.45□□□□□ -0.42
SGCE-204ENST00000428696 EGR3Q06889 387 aa12.45□□□□□ -0.42
SGCE-204ENST00000428696 TP53I3Q53FA7 332 aa12.45□□□□□ -0.42
SGCE-204ENST00000428696 DEGS2Q6QHC5 323 aa12.45□□□□□ -0.42
SGCE-204ENST00000428696 FAM220AQ7Z4H9 259 aa12.45□□□□□ -0.42
SGCE-204ENST00000428696 THAP5Q7Z6K1 395 aa12.45□□□□□ -0.42
SGCE-204ENST00000428696 ACBD7Q8N6N7 88 aa12.45□□□□□ -0.42
SGCE-204ENST00000428696 BPIFB6Q8NFQ5 453 aa12.45□□□□□ -0.42
SGCE-204ENST00000428696 OR2Z1Q8NG97 314 aa12.45□□□□□ -0.42
SGCE-204ENST00000428696 OR52H1Q8NGJ2 320 aa12.45□□□□□ -0.42
SGCE-204ENST00000428696 SGK3Q96BR1 496 aa12.45□□□□□ -0.42
SGCE-204ENST00000428696 REEP6Q96HR9 211 aa12.45□□□□□ -0.42
SGCE-204ENST00000428696 BARX1Q9HBU1 254 aaPredicted RBP12.45□□□□□ -0.42
SGCE-204ENST00000428696 DECR2Q9NUI1 292 aa12.45□□□□□ -0.42
SGCE-204ENST00000428696 C17orf100A8MU93 164 aa12.44□□□□□ -0.42
SGCE-204ENST00000428696 H0YJX3 145 aa12.44□□□□□ -0.42
SGCE-204ENST00000428696 J3QW42 95 aa12.44□□□□□ -0.42
SGCE-204ENST00000428696 FAM20BO75063 409 aa12.44□□□□□ -0.42
SGCE-204ENST00000428696 ANOS1P23352 680 aa12.44□□□□□ -0.42
SGCE-204ENST00000428696 MAGEB1P43366 347 aa12.44□□□□□ -0.42
SGCE-204ENST00000428696 CLEC12BQ2HXU8 276 aa12.44□□□□□ -0.42
SGCE-204ENST00000428696 ODF4Q2M2E3 257 aa12.44□□□□□ -0.42
SGCE-204ENST00000428696 ZNF829Q3KNS6 432 aaPredicted RBP12.44□□□□□ -0.42
SGCE-204ENST00000428696 TMEM255AQ5JRV8 349 aa12.44□□□□□ -0.42
SGCE-204ENST00000428696 FBXW12Q6X9E4 464 aa12.44□□□□□ -0.42
SGCE-204ENST00000428696 LRRC75A-AS1Q8N1F1 130 aa12.44□□□□□ -0.42
SGCE-204ENST00000428696 OR52I1Q8NGK6 324 aa12.44□□□□□ -0.42
SGCE-204ENST00000428696 PPP1R14AQ96A00 147 aa12.44□□□□□ -0.42
SGCE-204ENST00000428696 CYSLTR2Q9NS75 346 aa12.44□□□□□ -0.42
SGCE-204ENST00000428696 TREM2Q9NZC2 230 aa12.44□□□□□ -0.42
SGCE-204ENST00000428696 MRM2Q9UI43 246 aaKnown RBP12.44□□□□□ -0.42
SGCE-204ENST00000428696 EXOGQ9Y2C4 368 aaKnown RBP12.44□□□□□ -0.42
SGCE-204ENST00000428696 MYRFQ9Y2G1 1151 aa12.44□□□□□ -0.42
SGCE-204ENST00000428696 MAST4O15021 2626 aa12.43□□□□□ -0.42
SGCE-204ENST00000428696 IGHV3-64DA0A0J9YX35 117 aa12.43□□□□□ -0.42
SGCE-204ENST00000428696 LOC110117498-PIK3R3F6TDL0 507 aa12.43□□□□□ -0.42
SGCE-204ENST00000428696 LYNX1G3V0Z9 82 aa12.43□□□□□ -0.42
SGCE-204ENST00000428696 H3BSA7 217 aa12.43□□□□□ -0.42
SGCE-204ENST00000428696 XRCC2O43543 280 aa12.43□□□□□ -0.42
SGCE-204ENST00000428696 CDC14BO60729 498 aa12.43□□□□□ -0.42
SGCE-204ENST00000428696 TACSTD2P09758 323 aa12.43□□□□□ -0.42
SGCE-204ENST00000428696 LYNX1P0DP58 116 aa12.43□□□□□ -0.42
SGCE-204ENST00000428696 DAOP14920 347 aa12.43□□□□□ -0.42
SGCE-204ENST00000428696 SELEP16581 610 aa12.43□□□□□ -0.42
SGCE-204ENST00000428696 LIPAP38571 399 aa12.43□□□□□ -0.42
SGCE-204ENST00000428696 PSMB10P40306 273 aa12.43□□□□□ -0.42
SGCE-204ENST00000428696 MMP15P51511 669 aa12.43□□□□□ -0.42
SGCE-204ENST00000428696 PSMA6P60900 246 aaKnown RBP12.43□□□□□ -0.42
SGCE-204ENST00000428696 ZNF85Q03923 595 aa12.43□□□□□ -0.42
SGCE-204ENST00000428696 RAB40BQ12829 278 aa12.43□□□□□ -0.42
SGCE-204ENST00000428696 BCL2L15Q5TBC7 163 aa12.43□□□□□ -0.42
SGCE-204ENST00000428696 SHEQ5VZ18 495 aa12.43□□□□□ -0.42
SGCE-204ENST00000428696 CLEC2AQ6UVW9 174 aa12.43□□□□□ -0.42
SGCE-204ENST00000428696 ZNF525Q8N782 197 aa12.43□□□□□ -0.42
SGCE-204ENST00000428696 WFDC11Q8NEX6 87 aa12.43□□□□□ -0.42
SGCE-204ENST00000428696 NEU4Q8WWR8 484 aaPredicted RBP12.43□□□□□ -0.42
SGCE-204ENST00000428696 MRPL48Q96GC5 212 aaKnown RBP12.43□□□□□ -0.42
SGCE-204ENST00000428696 CNBD2Q96M20 576 aa12.43□□□□□ -0.42
SGCE-204ENST00000428696 Q96MF0 132 aa12.43□□□□□ -0.42
SGCE-204ENST00000428696 PBOV1Q9GZY1 135 aa12.43□□□□□ -0.42
SGCE-204ENST00000428696 TMEM100Q9NV29 134 aa12.43□□□□□ -0.42
SGCE-204ENST00000428696 ZNF319Q9P2F9 582 aa12.43□□□□□ -0.42
SGCE-204ENST00000428696 HSPE1-MOB4S4R3N1 261 aa12.43□□□□□ -0.42
SGCE-204ENST00000428696 RAI1Q7Z5J4 1906 aaPredicted RBP12.43□□□□□ -0.42
SGCE-204ENST00000428696 PRRC2AP48634 2157 aaKnown RBP12.42□□□□□ -0.42
SGCE-204ENST00000428696 ZSCAN5BA6NJL1 495 aa12.42□□□□□ -0.42
SGCE-204ENST00000428696 CD300LBA8K4G0 201 aa12.42□□□□□ -0.42
SGCE-204ENST00000428696 PTGES3LE9PB15 166 aa12.42□□□□□ -0.42
SGCE-204ENST00000428696 H3BSH0 61 aa12.42□□□□□ -0.42
SGCE-204ENST00000428696 XPNPEP2O43895 674 aa12.42□□□□□ -0.42
SGCE-204ENST00000428696 PNPP00491 289 aa12.42□□□□□ -0.42
SGCE-204ENST00000428696 KITLGP21583 273 aa12.42□□□□□ -0.42
SGCE-204ENST00000428696 TNFSF4P23510 183 aa12.42□□□□□ -0.42
SGCE-204ENST00000428696 HSPA13P48723 471 aa12.42□□□□□ -0.42
SGCE-204ENST00000428696 OR12D2P58182 307 aa12.42□□□□□ -0.42
SGCE-204ENST00000428696 TNFAIP6P98066 277 aaPredicted RBP12.42□□□□□ -0.42
SGCE-204ENST00000428696 MFGE8Q08431 387 aaPredicted RBP12.42□□□□□ -0.42
SGCE-204ENST00000428696 ZMAT1Q5H9K5 638 aa12.42□□□□□ -0.42
SGCE-204ENST00000428696 LIPNQ5VXI9 398 aa12.42□□□□□ -0.42
SGCE-204ENST00000428696 OR8G5Q8NG78 346 aa12.42□□□□□ -0.42
SGCE-204ENST00000428696 OR8B12Q8NGG6 310 aa12.42□□□□□ -0.42
SGCE-204ENST00000428696 SIGLEC11Q96RL6 698 aa12.42□□□□□ -0.42
SGCE-204ENST00000428696 RHNO1Q9BSD3 238 aa12.42□□□□□ -0.42
SGCE-204ENST00000428696 ALG8Q9BVK2 526 aa12.42□□□□□ -0.42
SGCE-204ENST00000428696 EGLN1Q9GZT9 426 aa12.42□□□□□ -0.42
SGCE-204ENST00000428696 CHCHD3Q9NX63 227 aaKnown RBP12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms