RNA–Protein interactions for RNA: ENST00000417628.6

ECHDC1-206, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-206ENST00000417628 CHRNB3Q05901 458 aa4.81□□□□□ -1.64
ECHDC1-206ENST00000417628 RASGEF1BQ0VAM2 473 aa4.81□□□□□ -1.64
ECHDC1-206ENST00000417628 PDZK1IP1Q13113 114 aa4.81□□□□□ -1.64
ECHDC1-206ENST00000417628 IRF3Q14653 427 aa4.81□□□□□ -1.64
ECHDC1-206ENST00000417628 SLC10A1Q14973 349 aa4.81□□□□□ -1.64
ECHDC1-206ENST00000417628 PCLAFQ15004 111 aa4.81□□□□□ -1.64
ECHDC1-206ENST00000417628 FCN2Q15485 313 aa4.81□□□□□ -1.64
ECHDC1-206ENST00000417628 HMGN3Q15651 99 aa4.81□□□□□ -1.64
ECHDC1-206ENST00000417628 RPE65Q16518 533 aa4.81□□□□□ -1.64
ECHDC1-206ENST00000417628 GUK1Q16774 197 aa4.81□□□□□ -1.64
ECHDC1-206ENST00000417628 BSXQ3C1V8 233 aa4.81□□□□□ -1.64
ECHDC1-206ENST00000417628 NRN1LQ496H8 165 aa4.81□□□□□ -1.64
ECHDC1-206ENST00000417628 RFTN2Q52LD8 501 aaPredicted RBP4.81□□□□□ -1.64
ECHDC1-206ENST00000417628 SIRPB2Q5JXA9 342 aa4.81□□□□□ -1.64
ECHDC1-206ENST00000417628 LRIF1Q5T3J3 769 aa4.81□□□□□ -1.64
ECHDC1-206ENST00000417628 ZDHHC20Q5W0Z9 365 aa4.81□□□□□ -1.64
ECHDC1-206ENST00000417628 TRIQKQ629K1 86 aa4.81□□□□□ -1.64
ECHDC1-206ENST00000417628 OR8G2PQ6IF36 304 aa4.81□□□□□ -1.64
ECHDC1-206ENST00000417628 SCIMPQ6UWF3 145 aa4.81□□□□□ -1.64
ECHDC1-206ENST00000417628 ABHD12BQ7Z5M8 362 aaPredicted RBP4.81□□□□□ -1.64
ECHDC1-206ENST00000417628 ZNF573Q86YE8 665 aa4.81□□□□□ -1.64
ECHDC1-206ENST00000417628 SPICQ8N5J4 248 aa4.81□□□□□ -1.64
ECHDC1-206ENST00000417628 PXT1Q8NFP0 134 aa4.81□□□□□ -1.64
ECHDC1-206ENST00000417628 OR8J3Q8NGG0 315 aa4.81□□□□□ -1.64
ECHDC1-206ENST00000417628 OR5T3Q8NGG3 340 aa4.81□□□□□ -1.64
ECHDC1-206ENST00000417628 THAP6Q8TBB0 222 aa4.81□□□□□ -1.64
ECHDC1-206ENST00000417628 ACTL9Q8TC94 416 aa4.81□□□□□ -1.64
ECHDC1-206ENST00000417628 RNASEH2CQ8TDP1 164 aaKnown RBP4.81□□□□□ -1.64
ECHDC1-206ENST00000417628 GPR151Q8TDV0 419 aa4.81□□□□□ -1.64
ECHDC1-206ENST00000417628 NPIPB3Q92617 1050 aa4.81□□□□□ -1.64
ECHDC1-206ENST00000417628 KTI12Q96EK9 354 aaPredicted RBP4.81□□□□□ -1.64
ECHDC1-206ENST00000417628 ZNF479Q96JC4 524 aa4.81□□□□□ -1.64
ECHDC1-206ENST00000417628 CXorf58Q96LI9 332 aa4.81□□□□□ -1.64
ECHDC1-206ENST00000417628 S100A13Q99584 98 aa4.81□□□□□ -1.64
ECHDC1-206ENST00000417628 NPAS2Q99743 824 aa4.81□□□□□ -1.64
ECHDC1-206ENST00000417628 KRTAP4-12Q9BQ66 201 aa4.81□□□□□ -1.64
ECHDC1-206ENST00000417628 SOSTQ9BQB4 213 aa4.81□□□□□ -1.64
ECHDC1-206ENST00000417628 PIGQQ9BRB3 760 aa4.81□□□□□ -1.64
ECHDC1-206ENST00000417628 FICDQ9BVA6 458 aa4.81□□□□□ -1.64
ECHDC1-206ENST00000417628 PRRG3Q9BZD7 231 aa4.81□□□□□ -1.64
ECHDC1-206ENST00000417628 PCBD2Q9H0N5 130 aa4.81□□□□□ -1.64
ECHDC1-206ENST00000417628 CSTL1Q9H114 145 aa4.81□□□□□ -1.64
ECHDC1-206ENST00000417628 SLITRK2Q9H156 845 aa4.81□□□□□ -1.64
ECHDC1-206ENST00000417628 DEFB127Q9H1M4 99 aa4.81□□□□□ -1.64
ECHDC1-206ENST00000417628 OR2AG1Q9H205 316 aa4.81□□□□□ -1.64
ECHDC1-206ENST00000417628 NOX3Q9HBY0 568 aa4.81□□□□□ -1.64
ECHDC1-206ENST00000417628 TMEM248Q9NWD8 314 aa4.81□□□□□ -1.64
ECHDC1-206ENST00000417628 SLCO1C1Q9NYB5 712 aa4.81□□□□□ -1.64
ECHDC1-206ENST00000417628 ZNF226Q9NYT6 803 aa4.81□□□□□ -1.64
ECHDC1-206ENST00000417628 MARCOQ9UEW3 520 aaPredicted RBP4.81□□□□□ -1.64
ECHDC1-206ENST00000417628 PACSIN3Q9UKS6 424 aa4.81□□□□□ -1.64
ECHDC1-206ENST00000417628 SH2B3Q9UQQ2 575 aa4.81□□□□□ -1.64
ECHDC1-206ENST00000417628 RCE1Q9Y256 329 aa4.81□□□□□ -1.64
ECHDC1-206ENST00000417628 TMED3Q9Y3Q3 217 aa4.81□□□□□ -1.64
ECHDC1-206ENST00000417628 MMP24Q9Y5R2 645 aa4.81□□□□□ -1.64
ECHDC1-206ENST00000417628 CCDC88CQ9P219 2028 aa4.8□□□□□ -1.64
ECHDC1-206ENST00000417628 LOC102723996A0A087X1L8 192 aa4.8□□□□□ -1.64
ECHDC1-206ENST00000417628 TCRBV9S1A1TA0A576 114 aa4.8□□□□□ -1.64
ECHDC1-206ENST00000417628 RBMY1BA6NDE4 496 aaKnown RBP4.8□□□□□ -1.64
ECHDC1-206ENST00000417628 RBMY1EA6NEQ0 496 aaKnown RBP4.8□□□□□ -1.64
ECHDC1-206ENST00000417628 G3V3Q6 166 aa4.8□□□□□ -1.64
ECHDC1-206ENST00000417628 DFFAO00273 331 aa4.8□□□□□ -1.64
ECHDC1-206ENST00000417628 UPK1AO00322 258 aa4.8□□□□□ -1.64
ECHDC1-206ENST00000417628 CDIPTO14735 213 aa4.8□□□□□ -1.64
ECHDC1-206ENST00000417628 TGOLN2O43493 480 aa4.8□□□□□ -1.64
ECHDC1-206ENST00000417628 HCRTR1O43613 425 aa4.8□□□□□ -1.64
ECHDC1-206ENST00000417628 OR2T1O43869 369 aa4.8□□□□□ -1.64
ECHDC1-206ENST00000417628 OR10H2O60403 315 aa4.8□□□□□ -1.64
ECHDC1-206ENST00000417628 ICOSLGO75144 302 aa4.8□□□□□ -1.64
ECHDC1-206ENST00000417628 SH3BGRLO75368 114 aa4.8□□□□□ -1.64
ECHDC1-206ENST00000417628 RHBDL1O75783 438 aa4.8□□□□□ -1.64
ECHDC1-206ENST00000417628 PNPP00491 289 aa4.8□□□□□ -1.64
ECHDC1-206ENST00000417628 SERPINA1P01009 418 aa4.8□□□□□ -1.64
ECHDC1-206ENST00000417628 IGHV4-39P01824 125 aa4.8□□□□□ -1.64
ECHDC1-206ENST00000417628 MT-ND2P03891 347 aa4.8□□□□□ -1.64
ECHDC1-206ENST00000417628 CHRM2P08172 466 aa4.8□□□□□ -1.64
ECHDC1-206ENST00000417628 RBMY1DP0C7P1 496 aaKnown RBP4.8□□□□□ -1.64
ECHDC1-206ENST00000417628 GKN3PP0CG01 181 aa4.8□□□□□ -1.64
ECHDC1-206ENST00000417628 C1GALT1C1LP0DN25 315 aa4.8□□□□□ -1.64
ECHDC1-206ENST00000417628 CPN1P15169 458 aa4.8□□□□□ -1.64
ECHDC1-206ENST00000417628 ZNF44P15621 663 aa4.8□□□□□ -1.64
ECHDC1-206ENST00000417628 SDC1P18827 310 aa4.8□□□□□ -1.64
ECHDC1-206ENST00000417628 IL11P20809 199 aa4.8□□□□□ -1.64
ECHDC1-206ENST00000417628 CRYGSP22914 178 aa4.8□□□□□ -1.64
ECHDC1-206ENST00000417628 PTPN3P26045 913 aa4.8□□□□□ -1.64
ECHDC1-206ENST00000417628 HTR2CP28335 458 aa4.8□□□□□ -1.64
ECHDC1-206ENST00000417628 CD200P41217 278 aa4.8□□□□□ -1.64
ECHDC1-206ENST00000417628 MAGEA3P43357 314 aa4.8□□□□□ -1.64
ECHDC1-206ENST00000417628 MAGEA12P43365 314 aa4.8□□□□□ -1.64
ECHDC1-206ENST00000417628 CCR6P51684 374 aa4.8□□□□□ -1.64
ECHDC1-206ENST00000417628 HCCSP53701 268 aa4.8□□□□□ -1.64
ECHDC1-206ENST00000417628 RPL15P61313 204 aaKnown RBP4.8□□□□□ -1.64
ECHDC1-206ENST00000417628 IRF8Q02556 426 aa4.8□□□□□ -1.64
ECHDC1-206ENST00000417628 SLC10A2Q12908 348 aaPredicted RBP4.8□□□□□ -1.64
ECHDC1-206ENST00000417628 SNAPC1Q16533 368 aa4.8□□□□□ -1.64
ECHDC1-206ENST00000417628 C5orf64Q2M2E5 130 aa4.8□□□□□ -1.64
ECHDC1-206ENST00000417628 ZNF674Q2M3X9 581 aa4.8□□□□□ -1.64
ECHDC1-206ENST00000417628 CTU2Q2VPK5 515 aaKnown RBP4.8□□□□□ -1.64
ECHDC1-206ENST00000417628 LRRC38Q5VT99 294 aa4.8□□□□□ -1.64
ECHDC1-206ENST00000417628 C11orf87Q6NUJ2 197 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms