RNA–Protein interactions for RNA: ENST00000415541.5

SIK3-203, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 3,816 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-203ENST00000415541 GATSQ8NAP1 163 aa7.06□□□□□ -1.28
SIK3-203ENST00000415541 OR13C8Q8NGS7 320 aa7.06□□□□□ -1.28
SIK3-203ENST00000415541 HIST1H2BHQ93079 126 aa7.06□□□□□ -1.28
SIK3-203ENST00000415541 HIST1H2BNQ99877 126 aa7.06□□□□□ -1.28
SIK3-203ENST00000415541 HIST1H2BMQ99879 126 aa7.06□□□□□ -1.28
SIK3-203ENST00000415541 CXorf36Q9H7Y0 433 aa7.06□□□□□ -1.28
SIK3-203ENST00000415541 MYOTQ9UBF9 498 aa7.06□□□□□ -1.28
SIK3-203ENST00000415541 A0A0J9YY10 115 aa7.05□□□□□ -1.28
SIK3-203ENST00000415541 CYB5AP00167 134 aa7.05□□□□□ -1.28
SIK3-203ENST00000415541 SLC6A9P48067 706 aa7.05□□□□□ -1.28
SIK3-203ENST00000415541 IDH3GP51553 393 aaPredicted RBP7.05□□□□□ -1.28
SIK3-203ENST00000415541 SUCLG1P53597 346 aaKnown RBP7.05□□□□□ -1.28
SIK3-203ENST00000415541 REEP5Q00765 189 aa7.05□□□□□ -1.28
SIK3-203ENST00000415541 GAS6Q14393 721 aa7.05□□□□□ -1.28
SIK3-203ENST00000415541 ZXDCQ2QGD7 858 aaPredicted RBP7.05□□□□□ -1.28
SIK3-203ENST00000415541 ARHGAP11AQ6P4F7 1023 aa7.05□□□□□ -1.28
SIK3-203ENST00000415541 OR4D11Q8NGI4 311 aa7.05□□□□□ -1.28
SIK3-203ENST00000415541 GRHL3Q8TE85 626 aa7.05□□□□□ -1.28
SIK3-203ENST00000415541 CASTOR1Q8WTX7 329 aa7.05□□□□□ -1.28
SIK3-203ENST00000415541 DNAJA3Q96EY1 480 aa7.05□□□□□ -1.28
SIK3-203ENST00000415541 C16orf58Q96GQ5 468 aa7.05□□□□□ -1.28
SIK3-203ENST00000415541 SLC25A18Q9H1K4 315 aa7.05□□□□□ -1.28
SIK3-203ENST00000415541 SLCO5A1Q9H2Y9 848 aa7.05□□□□□ -1.28
SIK3-203ENST00000415541 METTL8Q9H825 291 aaKnown RBP7.05□□□□□ -1.28
SIK3-203ENST00000415541 PRTFDC1Q9NRG1 225 aa7.05□□□□□ -1.28
SIK3-203ENST00000415541 SERTAD3Q9UJW9 196 aa7.05□□□□□ -1.28
SIK3-203ENST00000415541 MRPS18CQ9Y3D5 142 aaKnown RBP7.05□□□□□ -1.28
SIK3-203ENST00000415541 ENTPD2Q9Y5L3 495 aa7.05□□□□□ -1.28
SIK3-203ENST00000415541 A0A1W2PPC4 97 aa7.05□□□□□ -1.28
SIK3-203ENST00000415541 B4E171 279 aa7.05□□□□□ -1.28
SIK3-203ENST00000415541 TNFRSF10CO14798 259 aa7.05□□□□□ -1.28
SIK3-203ENST00000415541 CYB5BO43169 146 aa7.05□□□□□ -1.28
SIK3-203ENST00000415541 SIAH2O43255 324 aa7.05□□□□□ -1.28
SIK3-203ENST00000415541 SRPX2O60687 465 aaPredicted RBP7.05□□□□□ -1.28
SIK3-203ENST00000415541 RCBTB2O95199 551 aa7.05□□□□□ -1.28
SIK3-203ENST00000415541 CD1AP06126 327 aa7.05□□□□□ -1.28
SIK3-203ENST00000415541 RPL4P36578 427 aaKnown RBP7.05□□□□□ -1.28
SIK3-203ENST00000415541 TAGLN2P37802 199 aaKnown RBP7.05□□□□□ -1.28
SIK3-203ENST00000415541 DLK1P80370 383 aa7.05□□□□□ -1.28
SIK3-203ENST00000415541 H3F3AP84243 136 aa7.05□□□□□ -1.28
SIK3-203ENST00000415541 TMEM184AQ6ZMB5 413 aa7.05□□□□□ -1.28
SIK3-203ENST00000415541 ZNF620Q6ZNG0 422 aa7.05□□□□□ -1.28
SIK3-203ENST00000415541 VRK2Q86Y07 508 aa7.05□□□□□ -1.28
SIK3-203ENST00000415541 SYS1Q8N2H4 156 aa7.05□□□□□ -1.28
SIK3-203ENST00000415541 ARL14Q8N4G2 192 aa7.05□□□□□ -1.28
SIK3-203ENST00000415541 AMER3Q8N944 861 aa7.05□□□□□ -1.28
SIK3-203ENST00000415541 TMEM229BQ8NBD8 167 aa7.05□□□□□ -1.28
SIK3-203ENST00000415541 THAP3Q8WTV1 239 aaPredicted RBP7.05□□□□□ -1.28
SIK3-203ENST00000415541 MOAP1Q96BY2 351 aa7.05□□□□□ -1.28
SIK3-203ENST00000415541 ADGRG7Q96K78 797 aa7.05□□□□□ -1.28
SIK3-203ENST00000415541 STACQ99469 402 aa7.05□□□□□ -1.28
SIK3-203ENST00000415541 PRRT1Q99946 306 aa7.05□□□□□ -1.28
SIK3-203ENST00000415541 WSB2Q9NYS7 404 aaPredicted RBP7.05□□□□□ -1.28
SIK3-203ENST00000415541 LUZP4Q9P127 313 aa7.05□□□□□ -1.28
SIK3-203ENST00000415541 HS3ST3A1Q9Y663 406 aa7.05□□□□□ -1.28
SIK3-203ENST00000415541 WDR87Q6ZQQ6 2873 aa7.05□□□□□ -1.28
SIK3-203ENST00000415541 ALPK2Q86TB3 2170 aa7.05□□□□□ -1.28
SIK3-203ENST00000415541 CDC40O60508 579 aaKnown RBP eCLIP7.05□□□□□ -1.28
SIK3-203ENST00000415541 SLC2A10O95528 541 aa7.05□□□□□ -1.28
SIK3-203ENST00000415541 CST2P09228 141 aa7.05□□□□□ -1.28
SIK3-203ENST00000415541 CD27P26842 260 aa7.05□□□□□ -1.28
SIK3-203ENST00000415541 GPR4P46093 362 aa7.05□□□□□ -1.28
SIK3-203ENST00000415541 UBE2KP61086 200 aa7.05□□□□□ -1.28
SIK3-203ENST00000415541 RPS23P62266 143 aaKnown RBP7.05□□□□□ -1.28
SIK3-203ENST00000415541 TP53I3Q53FA7 332 aa7.05□□□□□ -1.28
SIK3-203ENST00000415541 FAM71E1Q6IPT2 247 aa7.05□□□□□ -1.28
SIK3-203ENST00000415541 ABHD17CQ6PCB6 329 aa7.05□□□□□ -1.28
SIK3-203ENST00000415541 CLEC2AQ6UVW9 174 aa7.05□□□□□ -1.28
SIK3-203ENST00000415541 ZNF705AQ6ZN79 300 aaPredicted RBP7.05□□□□□ -1.28
SIK3-203ENST00000415541 TMPRSS12Q86WS5 348 aa7.05□□□□□ -1.28
SIK3-203ENST00000415541 MFSD9Q8NBP5 474 aa7.05□□□□□ -1.28
SIK3-203ENST00000415541 ZNF248Q8NDW4 579 aa7.05□□□□□ -1.28
SIK3-203ENST00000415541 LFNGQ8NES3 379 aa7.05□□□□□ -1.28
SIK3-203ENST00000415541 OR9K2Q8NGE7 335 aa7.05□□□□□ -1.28
SIK3-203ENST00000415541 OR13C2Q8NGS9 318 aa7.05□□□□□ -1.28
SIK3-203ENST00000415541 METTL21AQ8WXB1 218 aa7.05□□□□□ -1.28
SIK3-203ENST00000415541 EXTL1Q92935 676 aa7.05□□□□□ -1.28
SIK3-203ENST00000415541 AMDHD1Q96NU7 426 aa7.05□□□□□ -1.28
SIK3-203ENST00000415541 SUSD2Q9UGT4 822 aa7.05□□□□□ -1.28
SIK3-203ENST00000415541 MEMO1Q9Y316 297 aa7.05□□□□□ -1.28
SIK3-203ENST00000415541 HDGFL3Q9Y3E1 203 aa7.05□□□□□ -1.28
SIK3-203ENST00000415541 NPIPA5A0A0B4J1W7 369 aa7.04□□□□□ -1.28
SIK3-203ENST00000415541 NPIPA7E9PJI5 369 aa7.04□□□□□ -1.28
SIK3-203ENST00000415541 LDLRAD4O15165 306 aa7.04□□□□□ -1.28
SIK3-203ENST00000415541 DUX1O43812 170 aa7.04□□□□□ -1.28
SIK3-203ENST00000415541 GUSBP08236 651 aa7.04□□□□□ -1.28
SIK3-203ENST00000415541 NPIPA8P0DM63 369 aa7.04□□□□□ -1.28
SIK3-203ENST00000415541 CD82P27701 267 aa7.04□□□□□ -1.28
SIK3-203ENST00000415541 PPICP45877 212 aa7.04□□□□□ -1.28
SIK3-203ENST00000415541 OR1D4P47884 311 aa7.04□□□□□ -1.28
SIK3-203ENST00000415541 ZNF616Q08AN1 781 aa7.04□□□□□ -1.28
SIK3-203ENST00000415541 PDE7AQ13946 482 aa7.04□□□□□ -1.28
SIK3-203ENST00000415541 EXOSC7Q15024 291 aaKnown RBP7.04□□□□□ -1.28
SIK3-203ENST00000415541 DECR1Q16698 335 aa7.04□□□□□ -1.28
SIK3-203ENST00000415541 LYSMD4Q5XG99 296 aa7.04□□□□□ -1.28
SIK3-203ENST00000415541 DND1Q8IYX4 353 aaKnown RBP7.04□□□□□ -1.28
SIK3-203ENST00000415541 OR5T1Q8NG75 326 aa7.04□□□□□ -1.28
SIK3-203ENST00000415541 ZNF563Q8TA94 476 aa7.04□□□□□ -1.28
SIK3-203ENST00000415541 RNASEH2CQ8TDP1 164 aaKnown RBP7.04□□□□□ -1.28
SIK3-203ENST00000415541 MVB12AQ96EY5 273 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms