RNA–Protein interactions for RNA: ENST00000414220.2

CHD1-202, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-202ENST00000414220 RTTNQ86VV8 2226 aa12.5□□□□□ -0.41
CHD1-202ENST00000414220 ZNF254O75437 659 aa12.5□□□□□ -0.41
CHD1-202ENST00000414220 MRPL3P09001 348 aaKnown RBP12.5□□□□□ -0.41
CHD1-202ENST00000414220 TACSTD2P09758 323 aa12.5□□□□□ -0.41
CHD1-202ENST00000414220 ALOX5APP20292 161 aa12.5□□□□□ -0.41
CHD1-202ENST00000414220 OPRL1P41146 370 aa12.5□□□□□ -0.41
CHD1-202ENST00000414220 AADACL4Q5VUY2 407 aa12.5□□□□□ -0.41
CHD1-202ENST00000414220 MEDAGQ5VYS4 303 aa12.5□□□□□ -0.41
CHD1-202ENST00000414220 Q71RC1 249 aaPredicted RBP12.5□□□□□ -0.41
CHD1-202ENST00000414220 FTMTQ8N4E7 242 aa12.5□□□□□ -0.41
CHD1-202ENST00000414220 FAM81AQ8TBF8 368 aa12.5□□□□□ -0.41
CHD1-202ENST00000414220 GTF3AQ92664 365 aaKnown RBP12.5□□□□□ -0.41
CHD1-202ENST00000414220 YIPF5Q969M3 257 aa12.5□□□□□ -0.41
CHD1-202ENST00000414220 SLC30A2Q9BRI3 323 aa12.5□□□□□ -0.41
CHD1-202ENST00000414220 REPIN1Q9BWE0 567 aaKnown RBP12.5□□□□□ -0.41
CHD1-202ENST00000414220 C8orf4Q9NR00 106 aa12.5□□□□□ -0.41
CHD1-202ENST00000414220 YAE1D1Q9NRH1 226 aa12.5□□□□□ -0.41
CHD1-202ENST00000414220 HAO2Q9NYQ3 351 aa12.5□□□□□ -0.41
CHD1-202ENST00000414220 IGHV4-61A0A0C4DH41 118 aa12.49□□□□□ -0.41
CHD1-202ENST00000414220 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.49□□□□□ -0.41
CHD1-202ENST00000414220 ACOD1A6NK06 481 aa12.49□□□□□ -0.41
CHD1-202ENST00000414220 ANKRD30BLA7E2S9 258 aa12.49□□□□□ -0.41
CHD1-202ENST00000414220 CD300LBA8K4G0 201 aa12.49□□□□□ -0.41
CHD1-202ENST00000414220 ZNF670-ZNF695F2Z2N8 137 aa12.49□□□□□ -0.41
CHD1-202ENST00000414220 MPZL2O60487 215 aa12.49□□□□□ -0.41
CHD1-202ENST00000414220 SLC2A1P11166 492 aa12.49□□□□□ -0.41
CHD1-202ENST00000414220 PSKH1P11801 424 aa12.49□□□□□ -0.41
CHD1-202ENST00000414220 POLR2IP36954 125 aaKnown RBP12.49□□□□□ -0.41
CHD1-202ENST00000414220 ZNF121P58317 390 aaPredicted RBP12.49□□□□□ -0.41
CHD1-202ENST00000414220 EFNB1P98172 346 aa12.49□□□□□ -0.41
CHD1-202ENST00000414220 SNAI3Q3KNW1 292 aa12.49□□□□□ -0.41
CHD1-202ENST00000414220 ZIK1Q3SY52 487 aaPredicted RBP12.49□□□□□ -0.41
CHD1-202ENST00000414220 GLYATL3Q5SZD4 288 aa12.49□□□□□ -0.41
CHD1-202ENST00000414220 FAM57BQ71RH2 274 aa12.49□□□□□ -0.41
CHD1-202ENST00000414220 SPERTQ8NA61 448 aa12.49□□□□□ -0.41
CHD1-202ENST00000414220 BHLHE23Q8NDY6 225 aa12.49□□□□□ -0.41
CHD1-202ENST00000414220 HRASLS5Q96KN8 279 aa12.49□□□□□ -0.41
CHD1-202ENST00000414220 OR2V2Q96R30 315 aa12.49□□□□□ -0.41
CHD1-202ENST00000414220 MYCBPQ99417 103 aaPredicted RBP12.49□□□□□ -0.41
CHD1-202ENST00000414220 BRD7Q9NPI1 651 aa12.49□□□□□ -0.41
CHD1-202ENST00000414220 DNAJC27Q9NZQ0 273 aa12.49□□□□□ -0.41
CHD1-202ENST00000414220 MRPL15Q9P015 296 aaKnown RBP12.49□□□□□ -0.41
CHD1-202ENST00000414220 ZNF391Q9UJN7 358 aa12.49□□□□□ -0.41
CHD1-202ENST00000414220 IKZF2Q9UKS7 526 aa12.49□□□□□ -0.41
CHD1-202ENST00000414220 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.49□□□□□ -0.41
CHD1-202ENST00000414220 PPP1R3CQ9UQK1 317 aa12.49□□□□□ -0.41
CHD1-202ENST00000414220 GMPPBQ9Y5P6 360 aa12.49□□□□□ -0.41
CHD1-202ENST00000414220 FLNAP21333 2647 aaKnown RBP12.48□□□□□ -0.41
CHD1-202ENST00000414220 A0A096LNT2 108 aa12.48□□□□□ -0.41
CHD1-202ENST00000414220 CCDC182A6NF36 153 aa12.48□□□□□ -0.41
CHD1-202ENST00000414220 LRRC30A6NM36 301 aa12.48□□□□□ -0.41
CHD1-202ENST00000414220 A8MV72 311 aaPredicted RBP12.48□□□□□ -0.41
CHD1-202ENST00000414220 GMDSO60547 372 aa12.48□□□□□ -0.41
CHD1-202ENST00000414220 RP2O75695 350 aa12.48□□□□□ -0.41
CHD1-202ENST00000414220 IRF2P14316 349 aa12.48□□□□□ -0.41
CHD1-202ENST00000414220 ANPEPP15144 967 aa12.48□□□□□ -0.41
CHD1-202ENST00000414220 HTR1FP30939 366 aa12.48□□□□□ -0.41
CHD1-202ENST00000414220 DCTDP32321 178 aa12.48□□□□□ -0.41
CHD1-202ENST00000414220 RIDAP52758 137 aaKnown RBP12.48□□□□□ -0.41
CHD1-202ENST00000414220 ZNF92Q03936 586 aa12.48□□□□□ -0.41
CHD1-202ENST00000414220 OR8G1Q15617 311 aa12.48□□□□□ -0.41
CHD1-202ENST00000414220 ZNF829Q3KNS6 432 aaPredicted RBP12.48□□□□□ -0.41
CHD1-202ENST00000414220 TMEM255AQ5JRV8 349 aa12.48□□□□□ -0.41
CHD1-202ENST00000414220 FAM166AQ6J272 317 aa12.48□□□□□ -0.41
CHD1-202ENST00000414220 LRRN1Q6UXK5 716 aa12.48□□□□□ -0.41
CHD1-202ENST00000414220 KLBQ86Z14 1044 aa12.48□□□□□ -0.41
CHD1-202ENST00000414220 SLC35F2Q8IXU6 374 aa12.48□□□□□ -0.41
CHD1-202ENST00000414220 ZNF679Q8IYX0 411 aa12.48□□□□□ -0.41
CHD1-202ENST00000414220 ZNF555Q8NEP9 628 aa12.48□□□□□ -0.41
CHD1-202ENST00000414220 OR2AE1Q8NHA4 323 aa12.48□□□□□ -0.41
CHD1-202ENST00000414220 ITLN1Q8WWA0 313 aa12.48□□□□□ -0.41
CHD1-202ENST00000414220 ITFG2Q969R8 447 aa12.48□□□□□ -0.41
CHD1-202ENST00000414220 ERGIC1Q969X5 290 aa12.48□□□□□ -0.41
CHD1-202ENST00000414220 RAB39BQ96DA2 213 aa12.48□□□□□ -0.41
CHD1-202ENST00000414220 REEP6Q96HR9 211 aa12.48□□□□□ -0.41
CHD1-202ENST00000414220 Q96MT0 163 aa12.48□□□□□ -0.41
CHD1-202ENST00000414220 RDH12Q96NR8 316 aa12.48□□□□□ -0.41
CHD1-202ENST00000414220 AMELYQ99218 206 aa12.48□□□□□ -0.41
CHD1-202ENST00000414220 CLN6Q9NWW5 311 aa12.48□□□□□ -0.41
CHD1-202ENST00000414220 KCNS2Q9ULS6 477 aa12.48□□□□□ -0.41
CHD1-202ENST00000414220 TMEM269A0A1B0GVZ9 245 aa12.47□□□□□ -0.41
CHD1-202ENST00000414220 LRP5LA4QPB2 252 aa12.47□□□□□ -0.41
CHD1-202ENST00000414220 M0R129 80 aa12.47□□□□□ -0.41
CHD1-202ENST00000414220 LILRA1O75019 489 aa12.47□□□□□ -0.41
CHD1-202ENST00000414220 SBK2P0C263 348 aa12.47□□□□□ -0.41
CHD1-202ENST00000414220 OR2T7P0C7T2 308 aa12.47□□□□□ -0.41
CHD1-202ENST00000414220 PCMT1P22061 227 aa12.47□□□□□ -0.41
CHD1-202ENST00000414220 CDH15P55291 814 aa12.47□□□□□ -0.41
CHD1-202ENST00000414220 PSMA6P60900 246 aaKnown RBP12.47□□□□□ -0.41
CHD1-202ENST00000414220 MVKQ03426 396 aa12.47□□□□□ -0.41
CHD1-202ENST00000414220 GFOD2Q3B7J2 385 aa12.47□□□□□ -0.41
CHD1-202ENST00000414220 ZNF322Q6U7Q0 402 aaPredicted RBP12.47□□□□□ -0.41
CHD1-202ENST00000414220 Q6ZR03 302 aa12.47□□□□□ -0.41
CHD1-202ENST00000414220 BCDIN3DQ7Z5W3 292 aaKnown RBP12.47□□□□□ -0.41
CHD1-202ENST00000414220 C1orf87Q8N0U7 546 aa12.47□□□□□ -0.41
CHD1-202ENST00000414220 CELF2-AS1Q8N7Q2 184 aa12.47□□□□□ -0.41
CHD1-202ENST00000414220 CSNK2A3Q8NEV1 391 aa12.47□□□□□ -0.41
CHD1-202ENST00000414220 OR51G2Q8NGK0 314 aa12.47□□□□□ -0.41
CHD1-202ENST00000414220 OR11L1Q8NGX0 322 aa12.47□□□□□ -0.41
CHD1-202ENST00000414220 OR2T27Q8NH04 317 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms