RNA–Protein interactions for RNA: ENST00000410044.5

LSM5-207, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-207ENST00000410044 ABHD4Q8TB40 342 aa13.09□□□□□ -0.31
LSM5-207ENST00000410044 PGAM5Q96HS1 289 aa13.09□□□□□ -0.31
LSM5-207ENST00000410044 REPIN1Q9BWE0 567 aaKnown RBP13.09□□□□□ -0.31
LSM5-207ENST00000410044 OR10A2Q9H208 303 aa13.09□□□□□ -0.31
LSM5-207ENST00000410044 CA10Q9NS85 328 aa13.09□□□□□ -0.31
LSM5-207ENST00000410044 ST6GALNAC2Q9UJ37 374 aa13.09□□□□□ -0.31
LSM5-207ENST00000410044 ATP23Q9Y6H3 246 aa13.09□□□□□ -0.31
LSM5-207ENST00000410044 RAI1Q7Z5J4 1906 aaPredicted RBP13.09□□□□□ -0.31
LSM5-207ENST00000410044 A0A087WXM4 84 aa13.08□□□□□ -0.32
LSM5-207ENST00000410044 RPSAP08865 295 aaKnown RBP13.08□□□□□ -0.32
LSM5-207ENST00000410044 RAC2P15153 192 aa13.08□□□□□ -0.32
LSM5-207ENST00000410044 APOBEC3AP31941 199 aaPredicted RBP13.08□□□□□ -0.32
LSM5-207ENST00000410044 EVX1P49640 407 aa13.08□□□□□ -0.32
LSM5-207ENST00000410044 TAS2R43P59537 309 aa13.08□□□□□ -0.32
LSM5-207ENST00000410044 NANOS3P60323 173 aaKnown RBP13.08□□□□□ -0.32
LSM5-207ENST00000410044 GPR50Q13585 617 aa13.08□□□□□ -0.32
LSM5-207ENST00000410044 ZNF718Q3SXZ3 478 aa13.08□□□□□ -0.32
LSM5-207ENST00000410044 WDR38Q5JTN6 314 aa13.08□□□□□ -0.32
LSM5-207ENST00000410044 UBE2UQ5VVX9 321 aa13.08□□□□□ -0.32
LSM5-207ENST00000410044 DMKNQ6E0U4 476 aaPredicted RBP13.08□□□□□ -0.32
LSM5-207ENST00000410044 RGS7BPQ6MZT1 257 aaPredicted RBP13.08□□□□□ -0.32
LSM5-207ENST00000410044 KLBQ86Z14 1044 aa13.08□□□□□ -0.32
LSM5-207ENST00000410044 PRSS35Q8N3Z0 413 aa13.08□□□□□ -0.32
LSM5-207ENST00000410044 TSPAN14Q8NG11 270 aa13.08□□□□□ -0.32
LSM5-207ENST00000410044 SLC25A40Q8TBP6 338 aa13.08□□□□□ -0.32
LSM5-207ENST00000410044 PPP1R14AQ96A00 147 aa13.08□□□□□ -0.32
LSM5-207ENST00000410044 HAVCR1Q96D42 359 aa13.08□□□□□ -0.32
LSM5-207ENST00000410044 OR5M11Q96RB7 305 aa13.08□□□□□ -0.32
LSM5-207ENST00000410044 DHRS9Q9BPW9 319 aa13.08□□□□□ -0.32
LSM5-207ENST00000410044 OR2J1Q9GZK6 312 aa13.08□□□□□ -0.32
LSM5-207ENST00000410044 OPA3Q9H6K4 179 aa13.08□□□□□ -0.32
LSM5-207ENST00000410044 BRD7Q9NPI1 651 aa13.08□□□□□ -0.32
LSM5-207ENST00000410044 TRIM36Q9NQ86 728 aa13.08□□□□□ -0.32
LSM5-207ENST00000410044 CISD1Q9NZ45 108 aaKnown RBP13.08□□□□□ -0.32
LSM5-207ENST00000410044 SLC22A13Q9Y226 551 aa13.08□□□□□ -0.32
LSM5-207ENST00000410044 GCN1Q92616 2671 aaKnown RBP13.08□□□□□ -0.32
LSM5-207ENST00000410044 PLCE1Q9P212 2302 aa13.07□□□□□ -0.32
LSM5-207ENST00000410044 IGLV3-9A0A075B6K5 115 aa13.07□□□□□ -0.32
LSM5-207ENST00000410044 OR4C45A6NMZ5 311 aa13.07□□□□□ -0.32
LSM5-207ENST00000410044 PLPP2O43688 288 aa13.07□□□□□ -0.32
LSM5-207ENST00000410044 GPRIN2O60269 458 aa13.07□□□□□ -0.32
LSM5-207ENST00000410044 ATE1O95260 518 aa13.07□□□□□ -0.32
LSM5-207ENST00000410044 ISG15P05161 165 aa13.07□□□□□ -0.32
LSM5-207ENST00000410044 LCKP06239 509 aa13.07□□□□□ -0.32
LSM5-207ENST00000410044 CCL1P22362 96 aa13.07□□□□□ -0.32
LSM5-207ENST00000410044 CFL1P23528 166 aaKnown RBP13.07□□□□□ -0.32
LSM5-207ENST00000410044 SSTR2P30874 369 aa13.07□□□□□ -0.32
LSM5-207ENST00000410044 KIR3DL2P43630 455 aa13.07□□□□□ -0.32
LSM5-207ENST00000410044 MAP2K4P45985 399 aa13.07□□□□□ -0.32
LSM5-207ENST00000410044 GTF2A1P52655 376 aaPredicted RBP13.07□□□□□ -0.32
LSM5-207ENST00000410044 ERVS71-1P61550 626 aa13.07□□□□□ -0.32
LSM5-207ENST00000410044 MALLQ13021 153 aa13.07□□□□□ -0.32
LSM5-207ENST00000410044 DOC2BQ14184 412 aa13.07□□□□□ -0.32
LSM5-207ENST00000410044 GK2Q14410 553 aaPredicted RBP13.07□□□□□ -0.32
LSM5-207ENST00000410044 CDK5R1Q15078 307 aa13.07□□□□□ -0.32
LSM5-207ENST00000410044 ADIPOQQ15848 244 aa13.07□□□□□ -0.32
LSM5-207ENST00000410044 MSMPQ1L6U9 139 aa13.07□□□□□ -0.32
LSM5-207ENST00000410044 GLYATL3Q5SZD4 288 aa13.07□□□□□ -0.32
LSM5-207ENST00000410044 BCL2L15Q5TBC7 163 aa13.07□□□□□ -0.32
LSM5-207ENST00000410044 XAF1Q6GPH4 301 aa13.07□□□□□ -0.32
LSM5-207ENST00000410044 KRT74Q7RTS7 529 aa13.07□□□□□ -0.32
LSM5-207ENST00000410044 PLPP7Q8NBV4 271 aa13.07□□□□□ -0.32
LSM5-207ENST00000410044 CCDC54Q8NEL0 328 aa13.07□□□□□ -0.32
LSM5-207ENST00000410044 KLF14Q8TD94 323 aaPredicted RBP13.07□□□□□ -0.32
LSM5-207ENST00000410044 FCGR1BQ92637 280 aa13.07□□□□□ -0.32
LSM5-207ENST00000410044 AKAP1Q92667 903 aaKnown RBP eCLIP13.07□□□□□ -0.32
LSM5-207ENST00000410044 NEUROG1Q92886 237 aa13.07□□□□□ -0.32
LSM5-207ENST00000410044 POFUT1Q9H488 388 aa13.07□□□□□ -0.32
LSM5-207ENST00000410044 PLEKHF2Q9H8W4 249 aa13.07□□□□□ -0.32
LSM5-207ENST00000410044 POU2F3Q9UKI9 436 aa13.07□□□□□ -0.32
LSM5-207ENST00000410044 CMAHPQ9Y471 501 aa13.07□□□□□ -0.32
LSM5-207ENST00000410044 SIRT4Q9Y6E7 314 aaPredicted RBP13.07□□□□□ -0.32
LSM5-207ENST00000410044 TRBV2A0A0J9YWF9 115 aa13.06□□□□□ -0.32
LSM5-207ENST00000410044 A0A1B0GTI1 187 aa13.06□□□□□ -0.32
LSM5-207ENST00000410044 LOC390937A0A1W2PQ73 354 aa13.06□□□□□ -0.32
LSM5-207ENST00000410044 MAGEA13PA6NCF6 341 aa13.06□□□□□ -0.32
LSM5-207ENST00000410044 HS3ST1O14792 307 aa13.06□□□□□ -0.32
LSM5-207ENST00000410044 TBX1O43435 398 aa13.06□□□□□ -0.32
LSM5-207ENST00000410044 IGHV3-13P01766 116 aa13.06□□□□□ -0.32
LSM5-207ENST00000410044 ATP6V1B1P15313 513 aa13.06□□□□□ -0.32
LSM5-207ENST00000410044 KITLGP21583 273 aa13.06□□□□□ -0.32
LSM5-207ENST00000410044 ZNF92Q03936 586 aa13.06□□□□□ -0.32
LSM5-207ENST00000410044 MLLT11Q13015 90 aaPredicted RBP13.06□□□□□ -0.32
LSM5-207ENST00000410044 TPBGQ13641 420 aa13.06□□□□□ -0.32
LSM5-207ENST00000410044 MED22Q15528 200 aa13.06□□□□□ -0.32
LSM5-207ENST00000410044 EFNB3Q15768 340 aa13.06□□□□□ -0.32
LSM5-207ENST00000410044 TMEM244Q5VVB8 128 aa13.06□□□□□ -0.32
LSM5-207ENST00000410044 ZNF367Q7RTV3 350 aa13.06□□□□□ -0.32
LSM5-207ENST00000410044 ZNF611Q8N823 705 aa13.06□□□□□ -0.32
LSM5-207ENST00000410044 SYNPRQ8TBG9 265 aa13.06□□□□□ -0.32
LSM5-207ENST00000410044 MRPL24Q96A35 216 aaKnown RBP13.06□□□□□ -0.32
LSM5-207ENST00000410044 CMBLQ96DG6 245 aa13.06□□□□□ -0.32
LSM5-207ENST00000410044 LYZL4Q96KX0 146 aa13.06□□□□□ -0.32
LSM5-207ENST00000410044 OR51B6Q9H340 312 aa13.06□□□□□ -0.32
LSM5-207ENST00000410044 PTTG3PQ9NZH4 202 aa13.06□□□□□ -0.32
LSM5-207ENST00000410044 TMEM212A6NML5 194 aa13.05□□□□□ -0.32
LSM5-207ENST00000410044 ZFPL1O95159 310 aa13.05□□□□□ -0.32
LSM5-207ENST00000410044 DANCRP0C864 163 aa13.05□□□□□ -0.32
LSM5-207ENST00000410044 UBCP0CG48 685 aaKnown RBP13.05□□□□□ -0.32
LSM5-207ENST00000410044 JUNBP17275 347 aaPredicted RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms