RNA–Protein interactions for RNA: ENST00000409417.5

PDLIM2-207, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-207ENST00000409417 OR8G5Q8NG78 346 aa16.89■□□□□ 0.29
PDLIM2-207ENST00000409417 RHOXF1Q8NHV9 184 aa16.89■□□□□ 0.29
PDLIM2-207ENST00000409417 RDH5Q92781 318 aa16.89■□□□□ 0.29
PDLIM2-207ENST00000409417 DECR2Q9NUI1 292 aa16.89■□□□□ 0.29
PDLIM2-207ENST00000409417 LRP12Q9Y561 859 aa16.89■□□□□ 0.29
PDLIM2-207ENST00000409417 N6AMT1Q9Y5N5 214 aa16.89■□□□□ 0.29
PDLIM2-207ENST00000409417 VWC2LB2RUY7 222 aa16.88■□□□□ 0.29
PDLIM2-207ENST00000409417 PHYHO14832 338 aa16.88■□□□□ 0.29
PDLIM2-207ENST00000409417 XRCC2O43543 280 aa16.88■□□□□ 0.29
PDLIM2-207ENST00000409417 ZNF254O75437 659 aa16.88■□□□□ 0.29
PDLIM2-207ENST00000409417 GIFP27352 417 aa16.88■□□□□ 0.29
PDLIM2-207ENST00000409417 ATP6V1E1P36543 226 aa16.88■□□□□ 0.29
PDLIM2-207ENST00000409417 CXCR4P61073 352 aa16.88■□□□□ 0.29
PDLIM2-207ENST00000409417 TSTQ16762 297 aaKnown RBP16.88■□□□□ 0.29
PDLIM2-207ENST00000409417 GLYATL3Q5SZD4 288 aa16.88■□□□□ 0.29
PDLIM2-207ENST00000409417 ZNF322Q6U7Q0 402 aaPredicted RBP16.88■□□□□ 0.29
PDLIM2-207ENST00000409417 Q6ZR03 302 aa16.88■□□□□ 0.29
PDLIM2-207ENST00000409417 ENTHD1Q8IYW4 607 aa16.88■□□□□ 0.29
PDLIM2-207ENST00000409417 ZNF679Q8IYX0 411 aa16.88■□□□□ 0.29
PDLIM2-207ENST00000409417 OR5AS1Q8N127 324 aa16.88■□□□□ 0.29
PDLIM2-207ENST00000409417 ZNF540Q8NDQ6 660 aa16.88■□□□□ 0.29
PDLIM2-207ENST00000409417 OR2AE1Q8NHA4 323 aa16.88■□□□□ 0.29
PDLIM2-207ENST00000409417 SPSB4Q96A44 273 aa16.88■□□□□ 0.29
PDLIM2-207ENST00000409417 OR8B4Q96RC9 309 aa16.88■□□□□ 0.29
PDLIM2-207ENST00000409417 PIMREGQ9BSJ6 248 aa16.88■□□□□ 0.29
PDLIM2-207ENST00000409417 OPA3Q9H6K4 179 aa16.88■□□□□ 0.29
PDLIM2-207ENST00000409417 NKX1-2Q9UD57 310 aaPredicted RBP16.88■□□□□ 0.29
PDLIM2-207ENST00000409417 SNTNA6NMZ2 147 aa16.87■□□□□ 0.29
PDLIM2-207ENST00000409417 PRR32B1ATL7 298 aa16.87■□□□□ 0.29
PDLIM2-207ENST00000409417 ZNF670-ZNF695F2Z2N8 137 aa16.87■□□□□ 0.29
PDLIM2-207ENST00000409417 LYNX1G3V0Z9 82 aa16.87■□□□□ 0.29
PDLIM2-207ENST00000409417 CD55P08174 381 aa16.87■□□□□ 0.29
PDLIM2-207ENST00000409417 OR2T7P0C7T2 308 aa16.87■□□□□ 0.29
PDLIM2-207ENST00000409417 LYNX1P0DP58 116 aa16.87■□□□□ 0.29
PDLIM2-207ENST00000409417 DCTDP32321 178 aa16.87■□□□□ 0.29
PDLIM2-207ENST00000409417 MTNR1AP48039 350 aa16.87■□□□□ 0.29
PDLIM2-207ENST00000409417 PSMA6P60900 246 aaKnown RBP16.87■□□□□ 0.29
PDLIM2-207ENST00000409417 FAM57BQ71RH2 274 aa16.87■□□□□ 0.29
PDLIM2-207ENST00000409417 RFLNBQ8N5W9 214 aa16.87■□□□□ 0.29
PDLIM2-207ENST00000409417 OR13G1Q8NGZ3 307 aa16.87■□□□□ 0.29
PDLIM2-207ENST00000409417 OR2T27Q8NH04 317 aa16.87■□□□□ 0.29
PDLIM2-207ENST00000409417 EGLN1Q9GZT9 426 aa16.87■□□□□ 0.29
PDLIM2-207ENST00000409417 SAP30LQ9HAJ7 183 aa16.87■□□□□ 0.29
PDLIM2-207ENST00000409417 CHD3Q12873 2000 aaKnown RBP16.87■□□□□ 0.29
PDLIM2-207ENST00000409417 A0A096LNT2 108 aa16.86■□□□□ 0.29
PDLIM2-207ENST00000409417 CD300LBA8K4G0 201 aa16.86■□□□□ 0.29
PDLIM2-207ENST00000409417 PSMD9O00233 223 aa16.86■□□□□ 0.29
PDLIM2-207ENST00000409417 SMAD7O15105 426 aaKnown RBP16.86■□□□□ 0.29
PDLIM2-207ENST00000409417 TPD52L2O43399 206 aaKnown RBP16.86■□□□□ 0.29
PDLIM2-207ENST00000409417 TBX1O43435 398 aa16.86■□□□□ 0.29
PDLIM2-207ENST00000409417 APOL3O95236 402 aa16.86■□□□□ 0.29
PDLIM2-207ENST00000409417 TNFSF4P23510 183 aa16.86■□□□□ 0.29
PDLIM2-207ENST00000409417 COL8A2P25067 703 aa16.86■□□□□ 0.29
PDLIM2-207ENST00000409417 PRSS12P56730 875 aa16.86■□□□□ 0.29
PDLIM2-207ENST00000409417 SLC34A1Q06495 639 aa16.86■□□□□ 0.29
PDLIM2-207ENST00000409417 RIN1Q13671 783 aa16.86■□□□□ 0.29
PDLIM2-207ENST00000409417 BHLHE23Q8NDY6 225 aa16.86■□□□□ 0.29
PDLIM2-207ENST00000409417 OR2Z1Q8NG97 314 aa16.86■□□□□ 0.29
PDLIM2-207ENST00000409417 SGK3Q96BR1 496 aa16.86■□□□□ 0.29
PDLIM2-207ENST00000409417 ELMOD3Q96FG2 381 aa16.86■□□□□ 0.29
PDLIM2-207ENST00000409417 Q96MT0 163 aa16.86■□□□□ 0.29
PDLIM2-207ENST00000409417 APOL4Q9BPW4 351 aa16.86■□□□□ 0.29
PDLIM2-207ENST00000409417 SLC30A2Q9BRI3 323 aa16.86■□□□□ 0.29
PDLIM2-207ENST00000409417 OR10A2Q9H208 303 aa16.86■□□□□ 0.29
PDLIM2-207ENST00000409417 RGCCQ9H4X1 137 aa16.86■□□□□ 0.29
PDLIM2-207ENST00000409417 CHODLQ9H9P2 273 aa16.86■□□□□ 0.29
PDLIM2-207ENST00000409417 BRD7Q9NPI1 651 aa16.86■□□□□ 0.29
PDLIM2-207ENST00000409417 AASSQ9UDR5 926 aa16.86■□□□□ 0.29
PDLIM2-207ENST00000409417 A0A1B0GWJ7 208 aa16.86■□□□□ 0.29
PDLIM2-207ENST00000409417 ACOD1A6NK06 481 aa16.86■□□□□ 0.29
PDLIM2-207ENST00000409417 LILRA1O75019 489 aa16.86■□□□□ 0.29
PDLIM2-207ENST00000409417 ACHEP22303 614 aa16.86■□□□□ 0.29
PDLIM2-207ENST00000409417 CRYBB2P43320 205 aa16.86■□□□□ 0.29
PDLIM2-207ENST00000409417 NR4A2P43354 598 aa16.86■□□□□ 0.29
PDLIM2-207ENST00000409417 RIDAP52758 137 aaKnown RBP16.86■□□□□ 0.29
PDLIM2-207ENST00000409417 TNFAIP6P98066 277 aaPredicted RBP16.86■□□□□ 0.29
PDLIM2-207ENST00000409417 EGR3Q06889 387 aa16.86■□□□□ 0.29
PDLIM2-207ENST00000409417 TIGD6Q17RP2 521 aa16.86■□□□□ 0.29
PDLIM2-207ENST00000409417 TTC23Q5W5X9 447 aa16.86■□□□□ 0.29
PDLIM2-207ENST00000409417 OR10H4Q8NGA5 316 aa16.86■□□□□ 0.29
PDLIM2-207ENST00000409417 SPRYD4Q8WW59 207 aaPredicted RBP16.86■□□□□ 0.29
PDLIM2-207ENST00000409417 RNFT2Q96EX2 444 aa16.86■□□□□ 0.29
PDLIM2-207ENST00000409417 PGAM5Q96HS1 289 aa16.86■□□□□ 0.29
PDLIM2-207ENST00000409417 TTTY10Q9BZA0 68 aa16.86■□□□□ 0.29
PDLIM2-207ENST00000409417 RNPEPL1Q9HAU8 725 aa16.86■□□□□ 0.29
PDLIM2-207ENST00000409417 ZNF319Q9P2F9 582 aa16.86■□□□□ 0.29
PDLIM2-207ENST00000409417 IKZF2Q9UKS7 526 aa16.86■□□□□ 0.29
PDLIM2-207ENST00000409417 IGHV1-69-2A0A0G2JMI3 117 aa16.85■□□□□ 0.29
PDLIM2-207ENST00000409417 A0A1W2PQL4 384 aaPredicted RBP16.85■□□□□ 0.29
PDLIM2-207ENST00000409417 GGT3PA6NGU5 568 aa16.85■□□□□ 0.29
PDLIM2-207ENST00000409417 CDC14BO60729 498 aa16.85■□□□□ 0.29
PDLIM2-207ENST00000409417 RP2O75695 350 aa16.85■□□□□ 0.29
PDLIM2-207ENST00000409417 CFL1P23528 166 aaKnown RBP16.85■□□□□ 0.29
PDLIM2-207ENST00000409417 TMEM33P57088 247 aa16.85■□□□□ 0.29
PDLIM2-207ENST00000409417 LOXL1Q08397 574 aaPredicted RBP16.85■□□□□ 0.29
PDLIM2-207ENST00000409417 BIVMQ86UB2 503 aa16.85■□□□□ 0.29
PDLIM2-207ENST00000409417 CYGBQ8WWM9 190 aa16.85■□□□□ 0.29
PDLIM2-207ENST00000409417 YIPF5Q969M3 257 aa16.85■□□□□ 0.29
PDLIM2-207ENST00000409417 REEP6Q96HR9 211 aa16.85■□□□□ 0.29
PDLIM2-207ENST00000409417 BPESC1Q9GZL8 116 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms