RNA–Protein interactions for RNA: ENST00000407422.7

SMARCB1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-204ENST00000407422 FEVQ99581 238 aa16.16■□□□□ 0.18
SMARCB1-204ENST00000407422 COPS4Q9BT78 406 aa16.16■□□□□ 0.18
SMARCB1-204ENST00000407422 C1orf21Q9H246 121 aa16.16■□□□□ 0.18
SMARCB1-204ENST00000407422 MED20Q9H944 212 aa16.16■□□□□ 0.18
SMARCB1-204ENST00000407422 CENPMQ9NSP4 180 aa16.16■□□□□ 0.18
SMARCB1-204ENST00000407422 CD300LBA8K4G0 201 aa16.16■□□□□ 0.18
SMARCB1-204ENST00000407422 A8MXK9 166 aa16.16■□□□□ 0.18
SMARCB1-204ENST00000407422 CST1P01037 141 aa16.16■□□□□ 0.18
SMARCB1-204ENST00000407422 SLC2A1P11166 492 aa16.16■□□□□ 0.18
SMARCB1-204ENST00000407422 CA6P23280 308 aa16.16■□□□□ 0.18
SMARCB1-204ENST00000407422 GATA4P43694 442 aa16.16■□□□□ 0.18
SMARCB1-204ENST00000407422 PRKXP51817 358 aa16.16■□□□□ 0.18
SMARCB1-204ENST00000407422 HOXA4Q00056 320 aaPredicted RBP16.16■□□□□ 0.18
SMARCB1-204ENST00000407422 ZNF154Q13106 437 aa16.16■□□□□ 0.18
SMARCB1-204ENST00000407422 ZNF181Q2M3W8 571 aa16.16■□□□□ 0.18
SMARCB1-204ENST00000407422 ESCO2Q56NI9 601 aa16.16■□□□□ 0.18
SMARCB1-204ENST00000407422 GLYATL3Q5SZD4 288 aa16.16■□□□□ 0.18
SMARCB1-204ENST00000407422 LINC01590Q5TEZ4 76 aa16.16■□□□□ 0.18
SMARCB1-204ENST00000407422 PRAMEF6Q5VXH4 476 aa16.16■□□□□ 0.18
SMARCB1-204ENST00000407422 CD300LDQ6UXZ3 194 aa16.16■□□□□ 0.18
SMARCB1-204ENST00000407422 SPATC1Q76KD6 591 aa16.16■□□□□ 0.18
SMARCB1-204ENST00000407422 TMEM179BQ7Z7N9 219 aa16.16■□□□□ 0.18
SMARCB1-204ENST00000407422 ZFAND2BQ8WV99 257 aa16.16■□□□□ 0.18
SMARCB1-204ENST00000407422 TMEM246Q9BRR3 403 aa16.16■□□□□ 0.18
SMARCB1-204ENST00000407422 N6AMT1Q9Y5N5 214 aa16.16■□□□□ 0.18
SMARCB1-204ENST00000407422 INSIG2Q9Y5U4 225 aa16.16■□□□□ 0.18
SMARCB1-204ENST00000407422 FAM183AA6NL82 134 aa16.15■□□□□ 0.18
SMARCB1-204ENST00000407422 LRRC30A6NM36 301 aa16.15■□□□□ 0.18
SMARCB1-204ENST00000407422 ZNF12P17014 697 aa16.15■□□□□ 0.18
SMARCB1-204ENST00000407422 MPPED2Q15777 294 aa16.15■□□□□ 0.18
SMARCB1-204ENST00000407422 DRAM2Q6UX65 266 aa16.15■□□□□ 0.18
SMARCB1-204ENST00000407422 BPIFB2Q8N4F0 458 aa16.15■□□□□ 0.18
SMARCB1-204ENST00000407422 C19orf18Q8NEA5 215 aa16.15■□□□□ 0.18
SMARCB1-204ENST00000407422 GIPC3Q8TF64 312 aa16.15■□□□□ 0.18
SMARCB1-204ENST00000407422 CANT1Q8WVQ1 401 aa16.15■□□□□ 0.18
SMARCB1-204ENST00000407422 DVL3Q92997 716 aaPredicted RBP16.15■□□□□ 0.18
SMARCB1-204ENST00000407422 POP5Q969H6 163 aaKnown RBP16.15■□□□□ 0.18
SMARCB1-204ENST00000407422 CMC2Q9NRP2 79 aa16.15■□□□□ 0.18
SMARCB1-204ENST00000407422 UFSP2Q9NUQ7 469 aa16.15■□□□□ 0.18
SMARCB1-204ENST00000407422 RIIAD1A6NNX1 92 aa16.14■□□□□ 0.17
SMARCB1-204ENST00000407422 IFNGP01579 166 aa16.14■□□□□ 0.17
SMARCB1-204ENST00000407422 RPS2P15880 293 aaKnown RBP16.14■□□□□ 0.17
SMARCB1-204ENST00000407422 CD200P41217 278 aa16.14■□□□□ 0.17
SMARCB1-204ENST00000407422 RAD23AP54725 363 aa16.14■□□□□ 0.17
SMARCB1-204ENST00000407422 TAF13Q15543 124 aa16.14■□□□□ 0.17
SMARCB1-204ENST00000407422 ZNF404Q494X3 552 aa16.14■□□□□ 0.17
SMARCB1-204ENST00000407422 TEX30Q5JUR7 227 aa16.14■□□□□ 0.17
SMARCB1-204ENST00000407422 CELF2-AS1Q8N7Q2 184 aa16.14■□□□□ 0.17
SMARCB1-204ENST00000407422 TEX47Q8TBZ9 253 aa16.14■□□□□ 0.17
SMARCB1-204ENST00000407422 KCNJ15Q99712 375 aa16.14■□□□□ 0.17
SMARCB1-204ENST00000407422 ESM1Q9NQ30 184 aa16.14■□□□□ 0.17
SMARCB1-204ENST00000407422 AUP1Q9Y679 476 aa16.14■□□□□ 0.17
SMARCB1-204ENST00000407422 DHRS12A0PJE2 317 aa16.13■□□□□ 0.17
SMARCB1-204ENST00000407422 GGT3PA6NGU5 568 aa16.13■□□□□ 0.17
SMARCB1-204ENST00000407422 H3BN98 237 aa16.13■□□□□ 0.17
SMARCB1-204ENST00000407422 HAX1O00165 279 aa16.13■□□□□ 0.17
SMARCB1-204ENST00000407422 FAM20BO75063 409 aa16.13■□□□□ 0.17
SMARCB1-204ENST00000407422 ZNF3P17036 446 aa16.13■□□□□ 0.17
SMARCB1-204ENST00000407422 OR8G1Q15617 311 aa16.13■□□□□ 0.17
SMARCB1-204ENST00000407422 KLF17Q5JT82 389 aaPredicted RBP16.13■□□□□ 0.17
SMARCB1-204ENST00000407422 KLBQ86Z14 1044 aa16.13■□□□□ 0.17
SMARCB1-204ENST00000407422 C1orf87Q8N0U7 546 aa16.13■□□□□ 0.17
SMARCB1-204ENST00000407422 OTULINQ96BN8 352 aa16.13■□□□□ 0.17
SMARCB1-204ENST00000407422 SSBP3Q9BWW4 388 aaPredicted RBP16.13■□□□□ 0.17
SMARCB1-204ENST00000407422 SUCNR1Q9BXA5 334 aa16.13■□□□□ 0.17
SMARCB1-204ENST00000407422 OR5V1Q9UGF6 321 aa16.13■□□□□ 0.17
SMARCB1-204ENST00000407422 LRCH1Q9Y2L9 728 aa16.13■□□□□ 0.17
SMARCB1-204ENST00000407422 PPIAL4AQ9Y536 164 aa16.13■□□□□ 0.17
SMARCB1-204ENST00000407422 CD80P33681 288 aa16.12■□□□□ 0.17
SMARCB1-204ENST00000407422 PAX2Q02962 417 aa16.12■□□□□ 0.17
SMARCB1-204ENST00000407422 ARMCX4Q5H9R4 360 aa16.12■□□□□ 0.17
SMARCB1-204ENST00000407422 DPY19L4Q7Z388 723 aa16.12■□□□□ 0.17
SMARCB1-204ENST00000407422 HS3ST5Q8IZT8 346 aa16.12■□□□□ 0.17
SMARCB1-204ENST00000407422 Q8TCH9 128 aa16.12■□□□□ 0.17
SMARCB1-204ENST00000407422 ADAT1Q9BUB4 502 aaKnown RBP16.12■□□□□ 0.17
SMARCB1-204ENST00000407422 PDP1Q9P0J1 537 aaPredicted RBP16.12■□□□□ 0.17
SMARCB1-204ENST00000407422 MIOXQ9UGB7 285 aa16.12■□□□□ 0.17
SMARCB1-204ENST00000407422 ARRDC5A6NEK1 342 aa16.12■□□□□ 0.17
SMARCB1-204ENST00000407422 AQP12BA6NM10 295 aa16.12■□□□□ 0.17
SMARCB1-204ENST00000407422 ZNF878C9JN71 531 aa16.12■□□□□ 0.17
SMARCB1-204ENST00000407422 FSTL3O95633 263 aa16.12■□□□□ 0.17
SMARCB1-204ENST00000407422 IRF2P14316 349 aa16.12■□□□□ 0.17
SMARCB1-204ENST00000407422 POU1F1P28069 291 aa16.12■□□□□ 0.17
SMARCB1-204ENST00000407422 GRK5P34947 590 aa16.12■□□□□ 0.17
SMARCB1-204ENST00000407422 EIF2B1Q14232 305 aaKnown RBP16.12■□□□□ 0.17
SMARCB1-204ENST00000407422 GK3PQ14409 553 aa16.12■□□□□ 0.17
SMARCB1-204ENST00000407422 LYPD2Q6UXB3 125 aa16.12■□□□□ 0.17
SMARCB1-204ENST00000407422 TRPM8Q7Z2W7 1104 aa16.12■□□□□ 0.17
SMARCB1-204ENST00000407422 ERI1Q8IV48 349 aaKnown RBP16.12■□□□□ 0.17
SMARCB1-204ENST00000407422 AQP12AQ8IXF9 295 aa16.12■□□□□ 0.17
SMARCB1-204ENST00000407422 ZDHHC22Q8N966 263 aa16.12■□□□□ 0.17
SMARCB1-204ENST00000407422 OR6N2Q8NGY6 317 aa16.12■□□□□ 0.17
SMARCB1-204ENST00000407422 FAM216AQ8WUB2 273 aa16.12■□□□□ 0.17
SMARCB1-204ENST00000407422 TRIM77I1YAP6 450 aa16.11■□□□□ 0.17
SMARCB1-204ENST00000407422 GNGT2O14610 69 aa16.11■□□□□ 0.17
SMARCB1-204ENST00000407422 FPR2P25090 351 aa16.11■□□□□ 0.17
SMARCB1-204ENST00000407422 BLVRAP53004 296 aa16.11■□□□□ 0.17
SMARCB1-204ENST00000407422 GNB2P62879 340 aa16.11■□□□□ 0.17
SMARCB1-204ENST00000407422 ACTG1P63261 375 aa16.11■□□□□ 0.17
SMARCB1-204ENST00000407422 PAX8Q06710 450 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms