RNA–Protein interactions for RNA: ENST00000403997.2

SDF4-203, Transcript of stromal cell derived factor 4, humanhuman

TSL 3

Gene SDF4, Length 728 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-203ENST00000403997 GRK5P34947 590 aa11.19□□□□□ -0.62
SDF4-203ENST00000403997 MDH2P40926 338 aaKnown RBP11.19□□□□□ -0.62
SDF4-203ENST00000403997 ZNF92Q03936 586 aa11.19□□□□□ -0.62
SDF4-203ENST00000403997 FLOT2Q14254 428 aa11.19□□□□□ -0.62
SDF4-203ENST00000403997 OR8G1Q15617 311 aa11.19□□□□□ -0.62
SDF4-203ENST00000403997 PCK2Q16822 640 aa11.19□□□□□ -0.62
SDF4-203ENST00000403997 LINC01590Q5TEZ4 76 aa11.19□□□□□ -0.62
SDF4-203ENST00000403997 SPATC1Q76KD6 591 aa11.19□□□□□ -0.62
SDF4-203ENST00000403997 MUC20Q8N307 709 aaPredicted RBP11.19□□□□□ -0.62
SDF4-203ENST00000403997 OR6N2Q8NGY6 317 aa11.19□□□□□ -0.62
SDF4-203ENST00000403997 OR2AE1Q8NHA4 323 aa11.19□□□□□ -0.62
SDF4-203ENST00000403997 NANPQ8TBE9 248 aa11.19□□□□□ -0.62
SDF4-203ENST00000403997 KCNJ15Q99712 375 aa11.19□□□□□ -0.62
SDF4-203ENST00000403997 YY1AP1Q9H869 796 aa11.19□□□□□ -0.62
SDF4-203ENST00000403997 ZNF556Q9HAH1 456 aa11.19□□□□□ -0.62
SDF4-203ENST00000403997 A0A0A6YYJ9 748 aa11.18□□□□□ -0.62
SDF4-203ENST00000403997 A0A1B0GWJ7 208 aa11.18□□□□□ -0.62
SDF4-203ENST00000403997 C5orf63A6NC05 138 aa11.18□□□□□ -0.62
SDF4-203ENST00000403997 LRRC30A6NM36 301 aa11.18□□□□□ -0.62
SDF4-203ENST00000403997 CD300LBA8K4G0 201 aa11.18□□□□□ -0.62
SDF4-203ENST00000403997 ZNF878C9JN71 531 aa11.18□□□□□ -0.62
SDF4-203ENST00000403997 RGS9O75916 674 aaPredicted RBP11.18□□□□□ -0.62
SDF4-203ENST00000403997 DNAJC8O75937 253 aaPredicted RBP11.18□□□□□ -0.62
SDF4-203ENST00000403997 SLC2A1P11166 492 aa11.18□□□□□ -0.62
SDF4-203ENST00000403997 IRF2P14316 349 aa11.18□□□□□ -0.62
SDF4-203ENST00000403997 ADRA2CP18825 462 aa11.18□□□□□ -0.62
SDF4-203ENST00000403997 PAICSP22234 425 aaKnown RBP11.18□□□□□ -0.62
SDF4-203ENST00000403997 PRKACGP22612 351 aa11.18□□□□□ -0.62
SDF4-203ENST00000403997 CA6P23280 308 aa11.18□□□□□ -0.62
SDF4-203ENST00000403997 GSTT1P30711 240 aa11.18□□□□□ -0.62
SDF4-203ENST00000403997 PMELP40967 661 aa11.18□□□□□ -0.62
SDF4-203ENST00000403997 SLC15A1P46059 708 aa11.18□□□□□ -0.62
SDF4-203ENST00000403997 RAD23AP54725 363 aa11.18□□□□□ -0.62
SDF4-203ENST00000403997 CBX1P83916 185 aa11.18□□□□□ -0.62
SDF4-203ENST00000403997 EIF2B1Q14232 305 aaKnown RBP11.18□□□□□ -0.62
SDF4-203ENST00000403997 GINS1Q14691 196 aa11.18□□□□□ -0.62
SDF4-203ENST00000403997 ESCO2Q56NI9 601 aa11.18□□□□□ -0.62
SDF4-203ENST00000403997 GLYATL3Q5SZD4 288 aa11.18□□□□□ -0.62
SDF4-203ENST00000403997 C1QL2Q7Z5L3 287 aa11.18□□□□□ -0.62
SDF4-203ENST00000403997 ERI1Q8IV48 349 aaKnown RBP11.18□□□□□ -0.62
SDF4-203ENST00000403997 HS3ST5Q8IZT8 346 aa11.18□□□□□ -0.62
SDF4-203ENST00000403997 C1orf87Q8N0U7 546 aa11.18□□□□□ -0.62
SDF4-203ENST00000403997 ZNF418Q8TF45 676 aaPredicted RBP11.18□□□□□ -0.62
SDF4-203ENST00000403997 SLC7A6OSQ96CW6 309 aaPredicted RBP11.18□□□□□ -0.62
SDF4-203ENST00000403997 INTS14Q96SY0 518 aa11.18□□□□□ -0.62
SDF4-203ENST00000403997 SLC22A4Q9H015 551 aa11.18□□□□□ -0.62
SDF4-203ENST00000403997 OR51V1Q9H2C8 321 aa11.18□□□□□ -0.62
SDF4-203ENST00000403997 MMP26Q9NRE1 261 aa11.18□□□□□ -0.62
SDF4-203ENST00000403997 POMPQ9Y244 141 aa11.18□□□□□ -0.62
SDF4-203ENST00000403997 NOP16Q9Y3C1 178 aaKnown RBP11.18□□□□□ -0.62
SDF4-203ENST00000403997 PPIAL4EA0A075B759 164 aa11.17□□□□□ -0.62
SDF4-203ENST00000403997 PPIAL4CA0A0B4J2A2 164 aa11.17□□□□□ -0.62
SDF4-203ENST00000403997 CEACAM18A8MTB9 384 aa11.17□□□□□ -0.62
SDF4-203ENST00000403997 PPIAL4DF5H284 164 aa11.17□□□□□ -0.62
SDF4-203ENST00000403997 TRAPPC2LH3BP13 241 aa11.17□□□□□ -0.62
SDF4-203ENST00000403997 TBX1O43435 398 aa11.17□□□□□ -0.62
SDF4-203ENST00000403997 FKBP6O75344 327 aa11.17□□□□□ -0.62
SDF4-203ENST00000403997 GLCEO94923 617 aa11.17□□□□□ -0.62
SDF4-203ENST00000403997 VENTXO95231 258 aa11.17□□□□□ -0.62
SDF4-203ENST00000403997 WNT2P09544 360 aa11.17□□□□□ -0.62
SDF4-203ENST00000403997 PPIAL4FP0DN26 164 aa11.17□□□□□ -0.62
SDF4-203ENST00000403997 OSMP13725 252 aa11.17□□□□□ -0.62
SDF4-203ENST00000403997 ANOS1P23352 680 aa11.17□□□□□ -0.62
SDF4-203ENST00000403997 SEC61A1P61619 476 aaKnown RBP11.17□□□□□ -0.62
SDF4-203ENST00000403997 GRB2P62993 217 aaKnown RBP11.17□□□□□ -0.62
SDF4-203ENST00000403997 MAB21L1Q13394 359 aa11.17□□□□□ -0.62
SDF4-203ENST00000403997 ZNF181Q2M3W8 571 aa11.17□□□□□ -0.62
SDF4-203ENST00000403997 FAM201AQ5SY85 155 aa11.17□□□□□ -0.62
SDF4-203ENST00000403997 DPY19L4Q7Z388 723 aa11.17□□□□□ -0.62
SDF4-203ENST00000403997 CELF2-AS1Q8N7Q2 184 aa11.17□□□□□ -0.62
SDF4-203ENST00000403997 OR11L1Q8NGX0 322 aa11.17□□□□□ -0.62
SDF4-203ENST00000403997 TMEM165Q9HC07 324 aa11.17□□□□□ -0.62
SDF4-203ENST00000403997 UFSP2Q9NUQ7 469 aa11.17□□□□□ -0.62
SDF4-203ENST00000403997 DNAJB9Q9UBS3 223 aa11.17□□□□□ -0.62
SDF4-203ENST00000403997 OPN4Q9UHM6 478 aa11.17□□□□□ -0.62
SDF4-203ENST00000403997 TCRBV3S1A0A5B6 114 aa11.16□□□□□ -0.62
SDF4-203ENST00000403997 PRR23D1E9PI22 279 aaPredicted RBP11.16□□□□□ -0.62
SDF4-203ENST00000403997 F5H0A9 414 aaPredicted RBP11.16□□□□□ -0.62
SDF4-203ENST00000403997 XRCC2O43543 280 aa11.16□□□□□ -0.62
SDF4-203ENST00000403997 GMDSO60547 372 aa11.16□□□□□ -0.62
SDF4-203ENST00000403997 HMGN1P05114 100 aa11.16□□□□□ -0.62
SDF4-203ENST00000403997 ANXA2P07355 339 aaKnown RBP11.16□□□□□ -0.62
SDF4-203ENST00000403997 PRR23D2P0DMB1 279 aaPredicted RBP11.16□□□□□ -0.62
SDF4-203ENST00000403997 ANXA8P13928 327 aa11.16□□□□□ -0.62
SDF4-203ENST00000403997 RPS2P15880 293 aaKnown RBP11.16□□□□□ -0.62
SDF4-203ENST00000403997 HSD11B1P28845 292 aa11.16□□□□□ -0.62
SDF4-203ENST00000403997 CD200P41217 278 aa11.16□□□□□ -0.62
SDF4-203ENST00000403997 GATA4P43694 442 aa11.16□□□□□ -0.62
SDF4-203ENST00000403997 CX3CR1P49238 355 aa11.16□□□□□ -0.62
SDF4-203ENST00000403997 PRAMEF6Q5VXH4 476 aa11.16□□□□□ -0.62
SDF4-203ENST00000403997 PLBD1Q6P4A8 553 aa11.16□□□□□ -0.62
SDF4-203ENST00000403997 SHFQ7M4L6 423 aa11.16□□□□□ -0.62
SDF4-203ENST00000403997 PAPD5Q8NDF8 572 aaKnown RBP11.16□□□□□ -0.62
SDF4-203ENST00000403997 ERGIC1Q969X5 290 aa11.16□□□□□ -0.62
SDF4-203ENST00000403997 ZMYND19Q96E35 227 aaPredicted RBP11.16□□□□□ -0.62
SDF4-203ENST00000403997 PLEKHA8Q96JA3 519 aa11.16□□□□□ -0.62
SDF4-203ENST00000403997 TMEM246Q9BRR3 403 aa11.16□□□□□ -0.62
SDF4-203ENST00000403997 ADAT1Q9BUB4 502 aaKnown RBP11.16□□□□□ -0.62
SDF4-203ENST00000403997 ABHD6Q9BV23 337 aa11.16□□□□□ -0.62
SDF4-203ENST00000403997 SSBP3Q9BWW4 388 aaPredicted RBP11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms