RNA–Protein interactions for RNA: ENST00000393943.9

GABRA1-202, Transcript of gamma-aminobutyric acid type A receptor alpha1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRA1, Length 4,686 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA1-202ENST00000393943 OR2B8PP59922 312 aa7.75□□□□□ -1.17
GABRA1-202ENST00000393943 ELAVL1Q15717 326 aaKnown RBP7.75□□□□□ -1.17
GABRA1-202ENST00000393943 MICBQ29980 383 aa7.75□□□□□ -1.17
GABRA1-202ENST00000393943 LILRA6Q6PI73 481 aa7.75□□□□□ -1.17
GABRA1-202ENST00000393943 FIP1L1Q6UN15 594 aaKnown RBP7.75□□□□□ -1.17
GABRA1-202ENST00000393943 VN1R4Q7Z5H5 301 aa7.75□□□□□ -1.17
GABRA1-202ENST00000393943 LURAP1LQ8IV03 231 aa7.75□□□□□ -1.17
GABRA1-202ENST00000393943 SLC38A9Q8NBW4 561 aa7.75□□□□□ -1.17
GABRA1-202ENST00000393943 FAM3CQ92520 227 aa7.75□□□□□ -1.17
GABRA1-202ENST00000393943 CPNE4Q96A23 557 aaPredicted RBP7.75□□□□□ -1.17
GABRA1-202ENST00000393943 OR2A5Q96R48 311 aa7.75□□□□□ -1.17
GABRA1-202ENST00000393943 METTL1Q9UBP6 276 aaKnown RBP7.75□□□□□ -1.17
GABRA1-202ENST00000393943 LOC102725191A0A1B0GVB3 256 aa7.75□□□□□ -1.17
GABRA1-202ENST00000393943 CTSVO60911 334 aa7.75□□□□□ -1.17
GABRA1-202ENST00000393943 SEMA7AO75326 666 aa7.75□□□□□ -1.17
GABRA1-202ENST00000393943 SCAF4O95104 1147 aaKnown RBP7.75□□□□□ -1.17
GABRA1-202ENST00000393943 PVRP15151 417 aa7.75□□□□□ -1.17
GABRA1-202ENST00000393943 ZBTB25P24278 435 aa7.75□□□□□ -1.17
GABRA1-202ENST00000393943 GJA4P35212 333 aa7.75□□□□□ -1.17
GABRA1-202ENST00000393943 PNRC1Q12796 327 aaPredicted RBP7.75□□□□□ -1.17
GABRA1-202ENST00000393943 HSD17B11Q8NBQ5 300 aa7.75□□□□□ -1.17
GABRA1-202ENST00000393943 OR51A4Q8NGJ6 313 aa7.75□□□□□ -1.17
GABRA1-202ENST00000393943 C16orf52Q8NHV5 167 aa7.75□□□□□ -1.17
GABRA1-202ENST00000393943 TAAR8Q969N4 342 aa7.75□□□□□ -1.17
GABRA1-202ENST00000393943 HHIPL1Q96JK4 782 aa7.75□□□□□ -1.17
GABRA1-202ENST00000393943 CAPNS2Q96L46 248 aa7.75□□□□□ -1.17
GABRA1-202ENST00000393943 WFDC6Q9BQY6 131 aa7.75□□□□□ -1.17
GABRA1-202ENST00000393943 WASF3Q9UPY6 502 aa7.75□□□□□ -1.17
GABRA1-202ENST00000393943 B3GALT1Q9Y5Z6 326 aa7.75□□□□□ -1.17
GABRA1-202ENST00000393943 HS3ST3A1Q9Y663 406 aa7.75□□□□□ -1.17
GABRA1-202ENST00000393943 SCN8AQ9UQD0 1980 aa7.75□□□□□ -1.17
GABRA1-202ENST00000393943 PRRT4C9JH25 899 aa7.75□□□□□ -1.17
GABRA1-202ENST00000393943 NME2P1O60361 137 aa7.75□□□□□ -1.17
GABRA1-202ENST00000393943 AKR7A3O95154 331 aa7.75□□□□□ -1.17
GABRA1-202ENST00000393943 SERPINE2P07093 398 aa7.75□□□□□ -1.17
GABRA1-202ENST00000393943 FOLR1P15328 257 aa7.75□□□□□ -1.17
GABRA1-202ENST00000393943 PTGFRP43088 359 aa7.75□□□□□ -1.17
GABRA1-202ENST00000393943 FAM3AP98173 230 aa7.75□□□□□ -1.17
GABRA1-202ENST00000393943 DLX2Q07687 328 aaPredicted RBP7.75□□□□□ -1.17
GABRA1-202ENST00000393943 SQSTM1Q13501 440 aa7.75□□□□□ -1.17
GABRA1-202ENST00000393943 MIDNQ504T8 468 aa7.75□□□□□ -1.17
GABRA1-202ENST00000393943 PLXDC2Q6UX71 529 aa7.75□□□□□ -1.17
GABRA1-202ENST00000393943 SLC25A43Q8WUT9 341 aaPredicted RBP7.75□□□□□ -1.17
GABRA1-202ENST00000393943 AQP10Q96PS8 301 aa7.75□□□□□ -1.17
GABRA1-202ENST00000393943 FGF22Q9HCT0 170 aa7.75□□□□□ -1.17
GABRA1-202ENST00000393943 CHST11Q9NPF2 352 aa7.75□□□□□ -1.17
GABRA1-202ENST00000393943 TBC1D29Q9UFV1 150 aa7.75□□□□□ -1.17
GABRA1-202ENST00000393943 SRPK3Q9UPE1 567 aa7.75□□□□□ -1.17
GABRA1-202ENST00000393943 TNFSF14O43557 240 aa7.75□□□□□ -1.17
GABRA1-202ENST00000393943 TIMP1P01033 207 aa7.75□□□□□ -1.17
GABRA1-202ENST00000393943 OR13C7P0DN81 318 aa7.75□□□□□ -1.17
GABRA1-202ENST00000393943 HLA-GP17693 338 aa7.75□□□□□ -1.17
GABRA1-202ENST00000393943 CSNK1A1P48729 337 aa7.75□□□□□ -1.17
GABRA1-202ENST00000393943 DEFB110Q30KQ9 67 aa7.75□□□□□ -1.17
GABRA1-202ENST00000393943 EXOSC6Q5RKV6 272 aaKnown RBP7.75□□□□□ -1.17
GABRA1-202ENST00000393943 VAX1Q5SQQ9 334 aa7.75□□□□□ -1.17
GABRA1-202ENST00000393943 TANGO2Q6ICL3 276 aa7.75□□□□□ -1.17
GABRA1-202ENST00000393943 OR52W1Q6IF63 320 aa7.75□□□□□ -1.17
GABRA1-202ENST00000393943 PLXDC1Q8IUK5 500 aa7.75□□□□□ -1.17
GABRA1-202ENST00000393943 SGK3Q96BR1 496 aa7.75□□□□□ -1.17
GABRA1-202ENST00000393943 CHRDQ9H2X0 955 aa7.75□□□□□ -1.17
GABRA1-202ENST00000393943 POU2F2P09086 479 aa7.74□□□□□ -1.17
GABRA1-202ENST00000393943 CTXN2P0C2S0 81 aa7.74□□□□□ -1.17
GABRA1-202ENST00000393943 ICAM2P13598 275 aa7.74□□□□□ -1.17
GABRA1-202ENST00000393943 NME1P15531 152 aaKnown RBP7.74□□□□□ -1.17
GABRA1-202ENST00000393943 GNB3P16520 340 aa7.74□□□□□ -1.17
GABRA1-202ENST00000393943 NKX2-1P43699 371 aaPredicted RBP7.74□□□□□ -1.17
GABRA1-202ENST00000393943 PNLIPRP2P54317 469 aa7.74□□□□□ -1.17
GABRA1-202ENST00000393943 MLF2Q15773 248 aaPredicted RBP7.74□□□□□ -1.17
GABRA1-202ENST00000393943 Q3ZCU0 254 aa7.74□□□□□ -1.17
GABRA1-202ENST00000393943 COL13A1Q5TAT6 717 aaPredicted RBP7.74□□□□□ -1.17
GABRA1-202ENST00000393943 TTLL10Q6ZVT0 673 aa7.74□□□□□ -1.17
GABRA1-202ENST00000393943 ANKRD33Q7Z3H0 272 aa7.74□□□□□ -1.17
GABRA1-202ENST00000393943 PRSS58Q8IYP2 241 aa7.74□□□□□ -1.17
GABRA1-202ENST00000393943 MVB12AQ96EY5 273 aa7.74□□□□□ -1.17
GABRA1-202ENST00000393943 CDCA3Q99618 268 aaPredicted RBP7.74□□□□□ -1.17
GABRA1-202ENST00000393943 VN1R3Q9BXE9 311 aa7.74□□□□□ -1.17
GABRA1-202ENST00000393943 PBOV1Q9GZY1 135 aa7.74□□□□□ -1.17
GABRA1-202ENST00000393943 NKX2-4Q9H2Z4 354 aa7.74□□□□□ -1.17
GABRA1-202ENST00000393943 ALKBH4Q9NXW9 302 aa7.74□□□□□ -1.17
GABRA1-202ENST00000393943 AK3Q9UIJ7 227 aa7.74□□□□□ -1.17
GABRA1-202ENST00000393943 TMED3Q9Y3Q3 217 aa7.74□□□□□ -1.17
GABRA1-202ENST00000393943 ZNF646O15015 1829 aaPredicted RBP7.74□□□□□ -1.17
GABRA1-202ENST00000393943 DUX1O43812 170 aa7.74□□□□□ -1.17
GABRA1-202ENST00000393943 CCL5P13501 91 aa7.74□□□□□ -1.17
GABRA1-202ENST00000393943 GABRR1P24046 479 aa7.74□□□□□ -1.17
GABRA1-202ENST00000393943 DEFB103AP81534 67 aa7.74□□□□□ -1.17
GABRA1-202ENST00000393943 AWAT1Q58HT5 328 aa7.74□□□□□ -1.17
GABRA1-202ENST00000393943 TMEM215Q68D42 235 aa7.74□□□□□ -1.17
GABRA1-202ENST00000393943 NPSR1Q6W5P4 371 aa7.74□□□□□ -1.17
GABRA1-202ENST00000393943 ZNF813Q6ZN06 617 aa7.74□□□□□ -1.17
GABRA1-202ENST00000393943 SLC16A13Q7RTY0 426 aa7.74□□□□□ -1.17
GABRA1-202ENST00000393943 NR2C2APQ86WQ0 139 aa7.74□□□□□ -1.17
GABRA1-202ENST00000393943 CATSPERDQ86XM0 798 aa7.74□□□□□ -1.17
GABRA1-202ENST00000393943 OR4S1Q8NGB4 309 aa7.74□□□□□ -1.17
GABRA1-202ENST00000393943 PP6455Q8WZ26 134 aa7.74□□□□□ -1.17
GABRA1-202ENST00000393943 FGF14Q92915 247 aa7.74□□□□□ -1.17
GABRA1-202ENST00000393943 TSPAN32Q96QS1 320 aa7.74□□□□□ -1.17
GABRA1-202ENST00000393943 PBX4Q9BYU1 374 aa7.74□□□□□ -1.17
GABRA1-202ENST00000393943 RCC2Q9P258 522 aaKnown RBP7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms