RNA–Protein interactions for RNA: ENST00000393824.7

CUX1-204, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-204ENST00000393824 NBL1P41271 181 aa9.95□□□□□ -0.82
CUX1-204ENST00000393824 MAP3K8P41279 467 aa9.95□□□□□ -0.82
CUX1-204ENST00000393824 GLP1RP43220 463 aa9.95□□□□□ -0.82
CUX1-204ENST00000393824 ID2Q02363 134 aa9.95□□□□□ -0.82
CUX1-204ENST00000393824 SQSTM1Q13501 440 aa9.95□□□□□ -0.82
CUX1-204ENST00000393824 HMGN3Q15651 99 aa9.95□□□□□ -0.82
CUX1-204ENST00000393824 C2orf76Q3KRA6 126 aa9.95□□□□□ -0.82
CUX1-204ENST00000393824 AWAT2Q6E213 333 aa9.95□□□□□ -0.82
CUX1-204ENST00000393824 FAHD2BQ6P2I3 314 aaPredicted RBP9.95□□□□□ -0.82
CUX1-204ENST00000393824 COX18Q8N8Q8 333 aa9.95□□□□□ -0.82
CUX1-204ENST00000393824 ADAMTS17Q8TE56 1095 aa9.95□□□□□ -0.82
CUX1-204ENST00000393824 MCHR2Q969V1 340 aa9.95□□□□□ -0.82
CUX1-204ENST00000393824 COL26A1Q96A83 441 aa9.95□□□□□ -0.82
CUX1-204ENST00000393824 ZNF501Q96CX3 271 aaPredicted RBP9.95□□□□□ -0.82
CUX1-204ENST00000393824 FAHD2AQ96GK7 314 aa9.95□□□□□ -0.82
CUX1-204ENST00000393824 PHB2Q99623 299 aa9.95□□□□□ -0.82
CUX1-204ENST00000393824 WNT5BQ9H1J7 359 aa9.95□□□□□ -0.82
CUX1-204ENST00000393824 HRH4Q9H3N8 390 aa9.95□□□□□ -0.82
CUX1-204ENST00000393824 TMEM9BQ9NQ34 198 aa9.95□□□□□ -0.82
CUX1-204ENST00000393824 FGF21Q9NSA1 209 aa9.95□□□□□ -0.82
CUX1-204ENST00000393824 IER3IP1Q9Y5U9 82 aa9.95□□□□□ -0.82
CUX1-204ENST00000393824 COL27A1Q8IZC6 1860 aaPredicted RBP9.95□□□□□ -0.82
CUX1-204ENST00000393824 LOC100289279A0A1B0GTE1 492 aa9.95□□□□□ -0.82
CUX1-204ENST00000393824 A0A1B0GWA3 101 aa9.95□□□□□ -0.82
CUX1-204ENST00000393824 TVP23AA6NH52 213 aa9.95□□□□□ -0.82
CUX1-204ENST00000393824 M0QYG6 137 aa9.95□□□□□ -0.82
CUX1-204ENST00000393824 DOK2O60496 412 aa9.95□□□□□ -0.82
CUX1-204ENST00000393824 ALOX12BO75342 701 aa9.95□□□□□ -0.82
CUX1-204ENST00000393824 FBXO24O75426 580 aa9.95□□□□□ -0.82
CUX1-204ENST00000393824 GLCEO94923 617 aa9.95□□□□□ -0.82
CUX1-204ENST00000393824 ACP1P24666 158 aa9.95□□□□□ -0.82
CUX1-204ENST00000393824 OR1D4P47884 311 aa9.95□□□□□ -0.82
CUX1-204ENST00000393824 EFNA3P52797 238 aa9.95□□□□□ -0.82
CUX1-204ENST00000393824 PHF19Q5T6S3 580 aa9.95□□□□□ -0.82
CUX1-204ENST00000393824 LINC01590Q5TEZ4 76 aa9.95□□□□□ -0.82
CUX1-204ENST00000393824 ARHGAP40Q5TG30 622 aa9.95□□□□□ -0.82
CUX1-204ENST00000393824 DHRS11Q6UWP2 260 aa9.95□□□□□ -0.82
CUX1-204ENST00000393824 BPIFB2Q8N4F0 458 aa9.95□□□□□ -0.82
CUX1-204ENST00000393824 THRSPQ92748 146 aa9.95□□□□□ -0.82
CUX1-204ENST00000393824 TMEM106AQ96A25 262 aa9.95□□□□□ -0.82
CUX1-204ENST00000393824 FAM3DQ96BQ1 224 aa9.95□□□□□ -0.82
CUX1-204ENST00000393824 OR5B2Q96R09 309 aa9.95□□□□□ -0.82
CUX1-204ENST00000393824 SPSB2Q99619 263 aa9.95□□□□□ -0.82
CUX1-204ENST00000393824 CDC6Q99741 560 aa9.95□□□□□ -0.82
CUX1-204ENST00000393824 MICU1Q9BPX6 476 aa9.95□□□□□ -0.82
CUX1-204ENST00000393824 RNF126Q9BV68 326 aa9.95□□□□□ -0.82
CUX1-204ENST00000393824 TOLLIPQ9H0E2 274 aa9.95□□□□□ -0.82
CUX1-204ENST00000393824 DAPP1Q9UN19 280 aa9.95□□□□□ -0.82
CUX1-204ENST00000393824 VSIG4Q9Y279 399 aa9.95□□□□□ -0.82
CUX1-204ENST00000393824 KPTNQ9Y664 436 aa9.95□□□□□ -0.82
CUX1-204ENST00000393824 URADA6NGE7 173 aa9.94□□□□□ -0.82
CUX1-204ENST00000393824 OR4C45A6NMZ5 311 aa9.94□□□□□ -0.82
CUX1-204ENST00000393824 ZNF736B4DX44 427 aaPredicted RBP9.94□□□□□ -0.82
CUX1-204ENST00000393824 PEX12O00623 359 aa9.94□□□□□ -0.82
CUX1-204ENST00000393824 SLC17A2O00624 439 aa9.94□□□□□ -0.82
CUX1-204ENST00000393824 ITGA5P08648 1049 aa9.94□□□□□ -0.82
CUX1-204ENST00000393824 CCL4P13236 92 aa9.94□□□□□ -0.82
CUX1-204ENST00000393824 RAB5AP20339 215 aa9.94□□□□□ -0.82
CUX1-204ENST00000393824 ZNF10P21506 573 aaPredicted RBP9.94□□□□□ -0.82
CUX1-204ENST00000393824 MPZP25189 248 aa9.94□□□□□ -0.82
CUX1-204ENST00000393824 AQP2P41181 271 aa9.94□□□□□ -0.82
CUX1-204ENST00000393824 RAB5CP51148 216 aa9.94□□□□□ -0.82
CUX1-204ENST00000393824 IL13RA1P78552 427 aa9.94□□□□□ -0.82
CUX1-204ENST00000393824 PPP1R1AQ13522 171 aa9.94□□□□□ -0.82
CUX1-204ENST00000393824 FAM166AQ6J272 317 aa9.94□□□□□ -0.82
CUX1-204ENST00000393824 ETV3LQ6ZN32 361 aa9.94□□□□□ -0.82
CUX1-204ENST00000393824 TTLL10Q6ZVT0 673 aa9.94□□□□□ -0.82
CUX1-204ENST00000393824 ASCL5Q7RTU5 278 aa9.94□□□□□ -0.82
CUX1-204ENST00000393824 FAM220AQ7Z4H9 259 aa9.94□□□□□ -0.82
CUX1-204ENST00000393824 NUBPLQ8TB37 319 aa9.94□□□□□ -0.82
CUX1-204ENST00000393824 OR6C1Q96RD1 312 aa9.94□□□□□ -0.82
CUX1-204ENST00000393824 NMNAT3Q96T66 252 aa9.94□□□□□ -0.82
CUX1-204ENST00000393824 MESP1Q9BRJ9 268 aa9.94□□□□□ -0.82
CUX1-204ENST00000393824 ADAM19Q9H013 955 aa9.94□□□□□ -0.82
CUX1-204ENST00000393824 AKIRIN1Q9H9L7 192 aaPredicted RBP9.94□□□□□ -0.82
CUX1-204ENST00000393824 FLRT3Q9NZU0 649 aa9.94□□□□□ -0.82
CUX1-204ENST00000393824 MRM2Q9UI43 246 aaKnown RBP9.94□□□□□ -0.82
CUX1-204ENST00000393824 CSAG2Q9Y5P2 127 aa9.94□□□□□ -0.82
CUX1-204ENST00000393824 A0A0B4J2A0 478 aa9.94□□□□□ -0.82
CUX1-204ENST00000393824 A0A1W2PNU3 283 aaPredicted RBP9.94□□□□□ -0.82
CUX1-204ENST00000393824 SYNDIG1LA6NDD5 238 aa9.94□□□□□ -0.82
CUX1-204ENST00000393824 CYR61O00622 381 aa9.94□□□□□ -0.82
CUX1-204ENST00000393824 SMAD9O15198 467 aaKnown RBP9.94□□□□□ -0.82
CUX1-204ENST00000393824 B3GALT2O43825 422 aa9.94□□□□□ -0.82
CUX1-204ENST00000393824 LDB3O75112 727 aa9.94□□□□□ -0.82
CUX1-204ENST00000393824 RPP14O95059 124 aaKnown RBP9.94□□□□□ -0.82
CUX1-204ENST00000393824 ABHD16AO95870 558 aa9.94□□□□□ -0.82
CUX1-204ENST00000393824 CYB5AP00167 134 aa9.94□□□□□ -0.82
CUX1-204ENST00000393824 NGFRP08138 427 aa9.94□□□□□ -0.82
CUX1-204ENST00000393824 OR8G3PP0DMU2 310 aa9.94□□□□□ -0.82
CUX1-204ENST00000393824 MAOAP21397 527 aa9.94□□□□□ -0.82
CUX1-204ENST00000393824 TACR3P29371 465 aa9.94□□□□□ -0.82
CUX1-204ENST00000393824 DVL1P1P54792 670 aaPredicted RBP9.94□□□□□ -0.82
CUX1-204ENST00000393824 CYCSP99999 105 aaKnown RBP9.94□□□□□ -0.82
CUX1-204ENST00000393824 C1orf189Q5VU69 101 aa9.94□□□□□ -0.82
CUX1-204ENST00000393824 C1QL4Q86Z23 238 aa9.94□□□□□ -0.82
CUX1-204ENST00000393824 ZDHHC22Q8N966 263 aa9.94□□□□□ -0.82
CUX1-204ENST00000393824 OR6K6Q8NGW6 343 aa9.94□□□□□ -0.82
CUX1-204ENST00000393824 GPR148Q8TDV2 347 aa9.94□□□□□ -0.82
CUX1-204ENST00000393824 DCUN1D4Q92564 292 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms