RNA–Protein interactions for RNA: ENST00000393546.8

PDLIM7-204, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-204ENST00000393546 COL8A2P25067 703 aa16.17■□□□□ 0.18
PDLIM7-204ENST00000393546 ZNF121P58317 390 aaPredicted RBP16.17■□□□□ 0.18
PDLIM7-204ENST00000393546 MRPS11P82912 194 aaKnown RBP16.17■□□□□ 0.18
PDLIM7-204ENST00000393546 ZNF92Q03936 586 aa16.17■□□□□ 0.18
PDLIM7-204ENST00000393546 OCLNQ16625 522 aa16.17■□□□□ 0.18
PDLIM7-204ENST00000393546 FAM57BQ71RH2 274 aa16.17■□□□□ 0.18
PDLIM7-204ENST00000393546 OR52H1Q8NGJ2 320 aa16.17■□□□□ 0.18
PDLIM7-204ENST00000393546 PGAM5Q96HS1 289 aa16.17■□□□□ 0.18
PDLIM7-204ENST00000393546 REPIN1Q9BWE0 567 aaKnown RBP16.17■□□□□ 0.18
PDLIM7-204ENST00000393546 BRD7Q9NPI1 651 aa16.17■□□□□ 0.18
PDLIM7-204ENST00000393546 COPS3Q9UNS2 423 aa16.17■□□□□ 0.18
PDLIM7-204ENST00000393546 CASQ2O14958 399 aaPredicted RBP16.16■□□□□ 0.18
PDLIM7-204ENST00000393546 ENTPD6O75354 484 aa16.16■□□□□ 0.18
PDLIM7-204ENST00000393546 ZNF254O75437 659 aa16.16■□□□□ 0.18
PDLIM7-204ENST00000393546 OR2T7P0C7T2 308 aa16.16■□□□□ 0.18
PDLIM7-204ENST00000393546 PEX2P28328 305 aa16.16■□□□□ 0.18
PDLIM7-204ENST00000393546 GLYATL3Q5SZD4 288 aa16.16■□□□□ 0.18
PDLIM7-204ENST00000393546 Q6ZR03 302 aa16.16■□□□□ 0.18
PDLIM7-204ENST00000393546 ZNF679Q8IYX0 411 aa16.16■□□□□ 0.18
PDLIM7-204ENST00000393546 OR2Z1Q8NG97 314 aa16.16■□□□□ 0.18
PDLIM7-204ENST00000393546 OR13G1Q8NGZ3 307 aa16.16■□□□□ 0.18
PDLIM7-204ENST00000393546 OR2T27Q8NH04 317 aa16.16■□□□□ 0.18
PDLIM7-204ENST00000393546 OR2AE1Q8NHA4 323 aa16.16■□□□□ 0.18
PDLIM7-204ENST00000393546 SPRYD4Q8WW59 207 aaPredicted RBP16.16■□□□□ 0.18
PDLIM7-204ENST00000393546 Q96MT0 163 aa16.16■□□□□ 0.18
PDLIM7-204ENST00000393546 OR8B4Q96RC9 309 aa16.16■□□□□ 0.18
PDLIM7-204ENST00000393546 OR10A2Q9H208 303 aa16.16■□□□□ 0.18
PDLIM7-204ENST00000393546 OPA3Q9H6K4 179 aa16.16■□□□□ 0.18
PDLIM7-204ENST00000393546 CHODLQ9H9P2 273 aa16.16■□□□□ 0.18
PDLIM7-204ENST00000393546 SAP30LQ9HAJ7 183 aa16.16■□□□□ 0.18
PDLIM7-204ENST00000393546 TMEM100Q9NV29 134 aa16.16■□□□□ 0.18
PDLIM7-204ENST00000393546 IKZF2Q9UKS7 526 aa16.16■□□□□ 0.18
PDLIM7-204ENST00000393546 LRP12Q9Y561 859 aa16.16■□□□□ 0.18
PDLIM7-204ENST00000393546 C5orf63A6NC05 138 aa16.15■□□□□ 0.18
PDLIM7-204ENST00000393546 GGT3PA6NGU5 568 aa16.15■□□□□ 0.18
PDLIM7-204ENST00000393546 VWC2LB2RUY7 222 aa16.15■□□□□ 0.18
PDLIM7-204ENST00000393546 PSMD9O00233 223 aa16.15■□□□□ 0.18
PDLIM7-204ENST00000393546 DLGAP1O14490 977 aa16.15■□□□□ 0.18
PDLIM7-204ENST00000393546 CD55P08174 381 aa16.15■□□□□ 0.18
PDLIM7-204ENST00000393546 ACHEP22303 614 aa16.15■□□□□ 0.18
PDLIM7-204ENST00000393546 GIFP27352 417 aa16.15■□□□□ 0.18
PDLIM7-204ENST00000393546 CRYBB2P43320 205 aa16.15■□□□□ 0.18
PDLIM7-204ENST00000393546 NR4A2P43354 598 aa16.15■□□□□ 0.18
PDLIM7-204ENST00000393546 RIDAP52758 137 aaKnown RBP16.15■□□□□ 0.18
PDLIM7-204ENST00000393546 CXCR4P61073 352 aa16.15■□□□□ 0.18
PDLIM7-204ENST00000393546 TNFAIP6P98066 277 aaPredicted RBP16.15■□□□□ 0.18
PDLIM7-204ENST00000393546 ROM1Q03395 351 aa16.15■□□□□ 0.18
PDLIM7-204ENST00000393546 TIGD6Q17RP2 521 aa16.15■□□□□ 0.18
PDLIM7-204ENST00000393546 OGFRL1Q5TC84 451 aaPredicted RBP16.15■□□□□ 0.18
PDLIM7-204ENST00000393546 ZNF322Q6U7Q0 402 aaPredicted RBP16.15■□□□□ 0.18
PDLIM7-204ENST00000393546 PRSS45Q7RTY3 260 aa16.15■□□□□ 0.18
PDLIM7-204ENST00000393546 BIVMQ86UB2 503 aa16.15■□□□□ 0.18
PDLIM7-204ENST00000393546 BHLHE23Q8NDY6 225 aa16.15■□□□□ 0.18
PDLIM7-204ENST00000393546 RHOXF1Q8NHV9 184 aa16.15■□□□□ 0.18
PDLIM7-204ENST00000393546 SGK3Q96BR1 496 aa16.15■□□□□ 0.18
PDLIM7-204ENST00000393546 ELMOD3Q96FG2 381 aa16.15■□□□□ 0.18
PDLIM7-204ENST00000393546 APOL4Q9BPW4 351 aa16.15■□□□□ 0.18
PDLIM7-204ENST00000393546 IGHV1-69-2A0A0G2JMI3 117 aa16.14■□□□□ 0.17
PDLIM7-204ENST00000393546 ACOD1A6NK06 481 aa16.14■□□□□ 0.17
PDLIM7-204ENST00000393546 CD300LBA8K4G0 201 aa16.14■□□□□ 0.17
PDLIM7-204ENST00000393546 CDC14BO60729 498 aa16.14■□□□□ 0.17
PDLIM7-204ENST00000393546 CFL1P23528 166 aaKnown RBP16.14■□□□□ 0.17
PDLIM7-204ENST00000393546 DCTDP32321 178 aa16.14■□□□□ 0.17
PDLIM7-204ENST00000393546 MTNR1AP48039 350 aa16.14■□□□□ 0.17
PDLIM7-204ENST00000393546 PRSS12P56730 875 aa16.14■□□□□ 0.17
PDLIM7-204ENST00000393546 TMEM33P57088 247 aa16.14■□□□□ 0.17
PDLIM7-204ENST00000393546 SLC34A1Q06495 639 aa16.14■□□□□ 0.17
PDLIM7-204ENST00000393546 EGR3Q06889 387 aa16.14■□□□□ 0.17
PDLIM7-204ENST00000393546 LOXL1Q08397 574 aaPredicted RBP16.14■□□□□ 0.17
PDLIM7-204ENST00000393546 TTC23Q5W5X9 447 aa16.14■□□□□ 0.17
PDLIM7-204ENST00000393546 ENTHD1Q8IYW4 607 aa16.14■□□□□ 0.17
PDLIM7-204ENST00000393546 MAPK1IP1LQ8NDC0 245 aa16.14■□□□□ 0.17
PDLIM7-204ENST00000393546 YIPF5Q969M3 257 aa16.14■□□□□ 0.17
PDLIM7-204ENST00000393546 SPSB4Q96A44 273 aa16.14■□□□□ 0.17
PDLIM7-204ENST00000393546 SLC30A2Q9BRI3 323 aa16.14■□□□□ 0.17
PDLIM7-204ENST00000393546 TTTY10Q9BZA0 68 aa16.14■□□□□ 0.17
PDLIM7-204ENST00000393546 TEP1Q99973 2627 aaKnown RBP16.14■□□□□ 0.17
PDLIM7-204ENST00000393546 TMEM269A0A1B0GVZ9 245 aa16.13■□□□□ 0.17
PDLIM7-204ENST00000393546 H0YHG0 523 aa16.13■□□□□ 0.17
PDLIM7-204ENST00000393546 APOL3O95236 402 aa16.13■□□□□ 0.17
PDLIM7-204ENST00000393546 GABRB1P18505 474 aa16.13■□□□□ 0.17
PDLIM7-204ENST00000393546 USF1P22415 310 aaPredicted RBP16.13■□□□□ 0.17
PDLIM7-204ENST00000393546 ANOS1P23352 680 aa16.13■□□□□ 0.17
PDLIM7-204ENST00000393546 DDOSTP39656 456 aa16.13■□□□□ 0.17
PDLIM7-204ENST00000393546 PSMA6P60900 246 aaKnown RBP16.13■□□□□ 0.17
PDLIM7-204ENST00000393546 RIN1Q13671 783 aa16.13■□□□□ 0.17
PDLIM7-204ENST00000393546 HFEQ30201 348 aa16.13■□□□□ 0.17
PDLIM7-204ENST00000393546 DHRSXQ8N5I4 330 aa16.13■□□□□ 0.17
PDLIM7-204ENST00000393546 OR10H4Q8NGA5 316 aa16.13■□□□□ 0.17
PDLIM7-204ENST00000393546 CYGBQ8WWM9 190 aa16.13■□□□□ 0.17
PDLIM7-204ENST00000393546 RNFT2Q96EX2 444 aa16.13■□□□□ 0.17
PDLIM7-204ENST00000393546 REEP6Q96HR9 211 aa16.13■□□□□ 0.17
PDLIM7-204ENST00000393546 TBX5Q99593 518 aa16.13■□□□□ 0.17
PDLIM7-204ENST00000393546 BPESC1Q9GZL8 116 aa16.13■□□□□ 0.17
PDLIM7-204ENST00000393546 SLC22A4Q9H015 551 aa16.13■□□□□ 0.17
PDLIM7-204ENST00000393546 VCXQ9H320 206 aa16.13■□□□□ 0.17
PDLIM7-204ENST00000393546 RGCCQ9H4X1 137 aa16.13■□□□□ 0.17
PDLIM7-204ENST00000393546 NKX1-2Q9UD57 310 aaPredicted RBP16.13■□□□□ 0.17
PDLIM7-204ENST00000393546 AASSQ9UDR5 926 aa16.13■□□□□ 0.17
PDLIM7-204ENST00000393546 IL19Q9UHD0 177 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms