RNA–Protein interactions for RNA: ENST00000392557.8

BRF1-204, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 3,579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-204ENST00000392557 HLA-BQ31612 363 aa9.69□□□□□ -0.86
BRF1-204ENST00000392557 JMJD6Q6NYC1 403 aaPredicted RBP9.69□□□□□ -0.86
BRF1-204ENST00000392557 ZNF574Q6ZN55 896 aaPredicted RBP9.69□□□□□ -0.86
BRF1-204ENST00000392557 OR4K17Q8NGC6 315 aa9.69□□□□□ -0.86
BRF1-204ENST00000392557 HOXB13Q92826 284 aaPredicted RBP9.69□□□□□ -0.86
BRF1-204ENST00000392557 EMC6Q9BV81 110 aa9.69□□□□□ -0.86
BRF1-204ENST00000392557 WWTR1Q9GZV5 400 aa9.69□□□□□ -0.86
BRF1-204ENST00000392557 MED9Q9NWA0 146 aa9.69□□□□□ -0.86
BRF1-204ENST00000392557 OR52A1Q9UKL2 312 aa9.69□□□□□ -0.86
BRF1-204ENST00000392557 KLK13Q9UKR3 277 aa9.69□□□□□ -0.86
BRF1-204ENST00000392557 PRELID3BQ9Y3B1 194 aa9.69□□□□□ -0.86
BRF1-204ENST00000392557 BOD1L1Q8NFC6 3051 aa9.68□□□□□ -0.86
BRF1-204ENST00000392557 SYT7O43581 403 aa9.68□□□□□ -0.86
BRF1-204ENST00000392557 ABCD3P28288 659 aa9.68□□□□□ -0.86
BRF1-204ENST00000392557 CD96P40200 585 aa9.68□□□□□ -0.86
BRF1-204ENST00000392557 SHBQ15464 509 aa9.68□□□□□ -0.86
BRF1-204ENST00000392557 TMEM200AQ86VY9 491 aa9.68□□□□□ -0.86
BRF1-204ENST00000392557 KCNRGQ8N5I3 272 aa9.68□□□□□ -0.86
BRF1-204ENST00000392557 ZSCAN1Q8NBB4 408 aa9.68□□□□□ -0.86
BRF1-204ENST00000392557 ADAD2Q8NCV1 583 aaKnown RBP9.68□□□□□ -0.86
BRF1-204ENST00000392557 OR4D6Q8NGJ1 314 aa9.68□□□□□ -0.86
BRF1-204ENST00000392557 NPRL2Q8WTW4 380 aa9.68□□□□□ -0.86
BRF1-204ENST00000392557 ASB17Q8WXJ9 295 aa9.68□□□□□ -0.86
BRF1-204ENST00000392557 ARL11Q969Q4 196 aa9.68□□□□□ -0.86
BRF1-204ENST00000392557 RNF166Q96A37 237 aaPredicted RBP9.68□□□□□ -0.86
BRF1-204ENST00000392557 CNTNAP3BQ96NU0 1288 aa9.68□□□□□ -0.86
BRF1-204ENST00000392557 C12orf57Q99622 126 aa9.68□□□□□ -0.86
BRF1-204ENST00000392557 PARP12Q9H0J9 701 aaKnown RBP9.68□□□□□ -0.86
BRF1-204ENST00000392557 FAM96BQ9Y3D0 163 aa9.68□□□□□ -0.86
BRF1-204ENST00000392557 BDP1A6H8Y1 2624 aa9.68□□□□□ -0.86
BRF1-204ENST00000392557 FRG2CA6NGY1 282 aa9.68□□□□□ -0.86
BRF1-204ENST00000392557 WISP1O95388 367 aa9.68□□□□□ -0.86
BRF1-204ENST00000392557 GP1BAP07359 652 aa9.68□□□□□ -0.86
BRF1-204ENST00000392557 TPT1P13693 172 aaKnown RBP9.68□□□□□ -0.86
BRF1-204ENST00000392557 ZNF20P17024 532 aa9.68□□□□□ -0.86
BRF1-204ENST00000392557 OR3A2P47893 321 aa9.68□□□□□ -0.86
BRF1-204ENST00000392557 FLI1Q01543 452 aaPredicted RBP9.68□□□□□ -0.86
BRF1-204ENST00000392557 LYG2Q86SG7 212 aa9.68□□□□□ -0.86
BRF1-204ENST00000392557 PUSL1Q8N0Z8 303 aaKnown RBP9.68□□□□□ -0.86
BRF1-204ENST00000392557 STOML3Q8TAV4 291 aa9.68□□□□□ -0.86
BRF1-204ENST00000392557 MVB12AQ96EY5 273 aa9.68□□□□□ -0.86
BRF1-204ENST00000392557 UTP23Q9BRU9 249 aaKnown RBP9.68□□□□□ -0.86
BRF1-204ENST00000392557 SMOC1Q9H4F8 434 aa9.68□□□□□ -0.86
BRF1-204ENST00000392557 TNFSF18Q9UNG2 199 aa9.68□□□□□ -0.86
BRF1-204ENST00000392557 ZNF175Q9Y473 711 aa9.68□□□□□ -0.86
BRF1-204ENST00000392557 POLEQ07864 2286 aa9.68□□□□□ -0.86
BRF1-204ENST00000392557 TRAV36DV7A0A075B6V5 113 aa9.68□□□□□ -0.86
BRF1-204ENST00000392557 MEGF11A6BM72 1044 aa9.68□□□□□ -0.86
BRF1-204ENST00000392557 FBXO24O75426 580 aa9.68□□□□□ -0.86
BRF1-204ENST00000392557 HCKP08631 526 aa9.68□□□□□ -0.86
BRF1-204ENST00000392557 ZNF806P0C7X5 589 aa9.68□□□□□ -0.86
BRF1-204ENST00000392557 PGCP20142 388 aa9.68□□□□□ -0.86
BRF1-204ENST00000392557 EPHA8P29322 1005 aaPredicted RBP9.68□□□□□ -0.86
BRF1-204ENST00000392557 POU3F1Q03052 451 aaPredicted RBP9.68□□□□□ -0.86
BRF1-204ENST00000392557 RBM39Q14498 530 aaKnown RBP9.68□□□□□ -0.86
BRF1-204ENST00000392557 MEF2DQ14814 521 aa9.68□□□□□ -0.86
BRF1-204ENST00000392557 NUP54Q7Z3B4 507 aa9.68□□□□□ -0.86
BRF1-204ENST00000392557 RNF128Q8TEB7 428 aa9.68□□□□□ -0.86
BRF1-204ENST00000392557 ADIPOR1Q96A54 375 aa9.68□□□□□ -0.86
BRF1-204ENST00000392557 CLDN23Q96B33 292 aa9.68□□□□□ -0.86
BRF1-204ENST00000392557 GPX7Q96SL4 187 aaPredicted RBP9.68□□□□□ -0.86
BRF1-204ENST00000392557 ST6GALNAC5Q9BVH7 336 aa9.68□□□□□ -0.86
BRF1-204ENST00000392557 RAB33BQ9H082 229 aa9.68□□□□□ -0.86
BRF1-204ENST00000392557 BANF2Q9H503 90 aa9.68□□□□□ -0.86
BRF1-204ENST00000392557 MED29Q9NX70 200 aa9.68□□□□□ -0.86
BRF1-204ENST00000392557 ZNF629Q9UEG4 869 aaPredicted RBP9.68□□□□□ -0.86
BRF1-204ENST00000392557 TMED7-TICAM2A0A0A6YYA0 188 aa9.67□□□□□ -0.86
BRF1-204ENST00000392557 A0A1W2PQM1 296 aa9.67□□□□□ -0.86
BRF1-204ENST00000392557 SHISA8B8ZZ34 492 aa9.67□□□□□ -0.86
BRF1-204ENST00000392557 KNG1P01042 644 aa9.67□□□□□ -0.86
BRF1-204ENST00000392557 IGKV3-11P04433 115 aa9.67□□□□□ -0.86
BRF1-204ENST00000392557 HOXB5P09067 269 aa9.67□□□□□ -0.86
BRF1-204ENST00000392557 HLA-DOBP13765 273 aa9.67□□□□□ -0.86
BRF1-204ENST00000392557 PSMB6P28072 239 aa9.67□□□□□ -0.86
BRF1-204ENST00000392557 SCRN3Q0VDG4 424 aa9.67□□□□□ -0.86
BRF1-204ENST00000392557 ISXQ2M1V0 245 aa9.67□□□□□ -0.86
BRF1-204ENST00000392557 NKAIN1Q4KMZ8 207 aa9.67□□□□□ -0.86
BRF1-204ENST00000392557 EMC4Q5J8M3 183 aa9.67□□□□□ -0.86
BRF1-204ENST00000392557 LINC00518Q8N0U6 118 aa9.67□□□□□ -0.86
BRF1-204ENST00000392557 OR5D18Q8NGL1 313 aa9.67□□□□□ -0.86
BRF1-204ENST00000392557 OR1N1Q8NGS0 311 aa9.67□□□□□ -0.86
BRF1-204ENST00000392557 OR4K15Q8NH41 348 aa9.67□□□□□ -0.86
BRF1-204ENST00000392557 ACKR4Q9NPB9 350 aa9.67□□□□□ -0.86
BRF1-204ENST00000392557 RARRES3Q9UL19 164 aa9.67□□□□□ -0.86
BRF1-204ENST00000392557 ICE1Q9Y2F5 2266 aa9.67□□□□□ -0.86
BRF1-204ENST00000392557 IGKV3D-11A0A0A0MRZ8 115 aa9.67□□□□□ -0.86
BRF1-204ENST00000392557 TMEM218A2RU14 115 aa9.67□□□□□ -0.86
BRF1-204ENST00000392557 C9orf170A2RU37 121 aa9.67□□□□□ -0.86
BRF1-204ENST00000392557 H3BMH7 237 aa9.67□□□□□ -0.86
BRF1-204ENST00000392557 ABCD4O14678 606 aa9.67□□□□□ -0.86
BRF1-204ENST00000392557 S100A6P06703 90 aa9.67□□□□□ -0.86
BRF1-204ENST00000392557 CBR1P16152 277 aa9.67□□□□□ -0.86
BRF1-204ENST00000392557 AKR1C3P42330 323 aa9.67□□□□□ -0.86
BRF1-204ENST00000392557 EMP2P54851 167 aa9.67□□□□□ -0.86
BRF1-204ENST00000392557 INSM1Q01101 510 aaPredicted RBP9.67□□□□□ -0.86
BRF1-204ENST00000392557 CARD17Q5XLA6 110 aa9.67□□□□□ -0.86
BRF1-204ENST00000392557 ANGPTL5Q86XS5 388 aa9.67□□□□□ -0.86
BRF1-204ENST00000392557 NAXEQ8NCW5 288 aa9.67□□□□□ -0.86
BRF1-204ENST00000392557 OR13C8Q8NGS7 320 aa9.67□□□□□ -0.86
BRF1-204ENST00000392557 MAFIPQ8WZ33 124 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms