RNA–Protein interactions for RNA: ENST00000381990.6

GPNMB-202, Transcript of glycoprotein nmb, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GPNMB, Length 2,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-202ENST00000381990 IGHV3-20A0A0C4DH32 117 aa7.97□□□□□ -1.13
GPNMB-202ENST00000381990 LOC105378220A0A1B0GUY1 285 aaPredicted RBP7.97□□□□□ -1.13
GPNMB-202ENST00000381990 MEX3AA1L020 520 aaKnown RBP7.97□□□□□ -1.13
GPNMB-202ENST00000381990 METTL21EPA6NDL7 271 aa7.97□□□□□ -1.13
GPNMB-202ENST00000381990 VSTM2BA6NLU5 285 aa7.97□□□□□ -1.13
GPNMB-202ENST00000381990 DCTN6O00399 190 aa7.97□□□□□ -1.13
GPNMB-202ENST00000381990 NTN3O00634 580 aaPredicted RBP7.97□□□□□ -1.13
GPNMB-202ENST00000381990 LDLRAD4O15165 306 aa7.97□□□□□ -1.13
GPNMB-202ENST00000381990 SCGNO76038 276 aa7.97□□□□□ -1.13
GPNMB-202ENST00000381990 S100A9P06702 114 aaKnown RBP7.97□□□□□ -1.13
GPNMB-202ENST00000381990 FGF5P12034 268 aa7.97□□□□□ -1.13
GPNMB-202ENST00000381990 EMP2P54851 167 aa7.97□□□□□ -1.13
GPNMB-202ENST00000381990 FOXL2P58012 376 aa7.97□□□□□ -1.13
GPNMB-202ENST00000381990 TAS2R31P59538 309 aa7.97□□□□□ -1.13
GPNMB-202ENST00000381990 RNF4P78317 190 aa7.97□□□□□ -1.13
GPNMB-202ENST00000381990 ROM1Q03395 351 aa7.97□□□□□ -1.13
GPNMB-202ENST00000381990 PPP1R1AQ13522 171 aa7.97□□□□□ -1.13
GPNMB-202ENST00000381990 TRA2AQ13595 282 aaKnown RBP eCLIP7.97□□□□□ -1.13
GPNMB-202ENST00000381990 IL11RAQ14626 422 aa7.97□□□□□ -1.13
GPNMB-202ENST00000381990 SLC17A1Q14916 467 aa7.97□□□□□ -1.13
GPNMB-202ENST00000381990 MESTQ5EB52 335 aa7.97□□□□□ -1.13
GPNMB-202ENST00000381990 GLYATL3Q5SZD4 288 aa7.97□□□□□ -1.13
GPNMB-202ENST00000381990 UNQ6126/PRO20091Q6UXV3 157 aa7.97□□□□□ -1.13
GPNMB-202ENST00000381990 C10orf53Q8N6V4 93 aa7.97□□□□□ -1.13
GPNMB-202ENST00000381990 NKAIN3Q8N8D7 197 aa7.97□□□□□ -1.13
GPNMB-202ENST00000381990 BOLLQ8N9W6 283 aaKnown RBP7.97□□□□□ -1.13
GPNMB-202ENST00000381990 PLPP7Q8NBV4 271 aa7.97□□□□□ -1.13
GPNMB-202ENST00000381990 NFAM1Q8NET5 270 aaPredicted RBP7.97□□□□□ -1.13
GPNMB-202ENST00000381990 TCEAL3Q969E4 200 aa7.97□□□□□ -1.13
GPNMB-202ENST00000381990 ZNF251Q9BRH9 671 aa7.97□□□□□ -1.13
GPNMB-202ENST00000381990 TCEAL7Q9BRU2 100 aa7.97□□□□□ -1.13
GPNMB-202ENST00000381990 TBL1XR1Q9BZK7 514 aa7.97□□□□□ -1.13
GPNMB-202ENST00000381990 TREM1Q9NP99 234 aa7.97□□□□□ -1.13
GPNMB-202ENST00000381990 OCIAD1Q9NX40 245 aa7.97□□□□□ -1.13
GPNMB-202ENST00000381990 MPDZO75970 2070 aa7.97□□□□□ -1.13
GPNMB-202ENST00000381990 DBX1A6NMT0 343 aa7.97□□□□□ -1.13
GPNMB-202ENST00000381990 CCSO14618 274 aa7.97□□□□□ -1.13
GPNMB-202ENST00000381990 PGAM2P15259 253 aa7.97□□□□□ -1.13
GPNMB-202ENST00000381990 IGFBP3P17936 291 aaPredicted RBP7.97□□□□□ -1.13
GPNMB-202ENST00000381990 AKR1C2P52895 323 aa7.97□□□□□ -1.13
GPNMB-202ENST00000381990 EIF5AP63241 154 aaKnown RBP7.97□□□□□ -1.13
GPNMB-202ENST00000381990 ZNF117Q03924 483 aa7.97□□□□□ -1.13
GPNMB-202ENST00000381990 AKR1C1Q04828 323 aa7.97□□□□□ -1.13
GPNMB-202ENST00000381990 EIF5AL1Q6IS14 154 aaKnown RBP7.97□□□□□ -1.13
GPNMB-202ENST00000381990 KCTD18Q6PI47 426 aaPredicted RBP7.97□□□□□ -1.13
GPNMB-202ENST00000381990 APCDD1LQ8NCL9 501 aa7.97□□□□□ -1.13
GPNMB-202ENST00000381990 OR6S1Q8NH40 331 aa7.97□□□□□ -1.13
GPNMB-202ENST00000381990 RXFP4Q8TDU9 374 aa7.97□□□□□ -1.13
GPNMB-202ENST00000381990 ASB5Q8WWX0 329 aa7.97□□□□□ -1.13
GPNMB-202ENST00000381990 AQP3Q92482 292 aa7.97□□□□□ -1.13
GPNMB-202ENST00000381990 PTDSS2Q9BVG9 487 aa7.97□□□□□ -1.13
GPNMB-202ENST00000381990 CST11Q9H112 138 aa7.97□□□□□ -1.13
GPNMB-202ENST00000381990 SLC26A1Q9H2B4 701 aa7.97□□□□□ -1.13
GPNMB-202ENST00000381990 RCC2Q9P258 522 aaKnown RBP7.97□□□□□ -1.13
GPNMB-202ENST00000381990 LPAR3Q9UBY5 353 aa7.97□□□□□ -1.13
GPNMB-202ENST00000381990 ZNF346Q9UL40 294 aaKnown RBP7.97□□□□□ -1.13
GPNMB-202ENST00000381990 WIF1Q9Y5W5 379 aa7.97□□□□□ -1.13
GPNMB-202ENST00000381990 LOC390937A0A1W2PQ73 354 aa7.96□□□□□ -1.13
GPNMB-202ENST00000381990 HCRTR2O43614 444 aa7.96□□□□□ -1.13
GPNMB-202ENST00000381990 CYC1P08574 325 aa7.96□□□□□ -1.13
GPNMB-202ENST00000381990 SLC6A9P48067 706 aa7.96□□□□□ -1.13
GPNMB-202ENST00000381990 PEA15Q15121 130 aa7.96□□□□□ -1.13
GPNMB-202ENST00000381990 ODF4Q2M2E3 257 aa7.96□□□□□ -1.13
GPNMB-202ENST00000381990 SLC18B1Q6NT16 456 aa7.96□□□□□ -1.13
GPNMB-202ENST00000381990 MARCH3Q86UD3 253 aa7.96□□□□□ -1.13
GPNMB-202ENST00000381990 TMEM200AQ86VY9 491 aa7.96□□□□□ -1.13
GPNMB-202ENST00000381990 C15orf54Q8N8G6 183 aa7.96□□□□□ -1.13
GPNMB-202ENST00000381990 AGBL5Q8NDL9 886 aa7.96□□□□□ -1.13
GPNMB-202ENST00000381990 OR4A4PQ8NGN8 299 aa7.96□□□□□ -1.13
GPNMB-202ENST00000381990 ZNF563Q8TA94 476 aa7.96□□□□□ -1.13
GPNMB-202ENST00000381990 TSPAN32Q96QS1 320 aa7.96□□□□□ -1.13
GPNMB-202ENST00000381990 LPAR4Q99677 370 aa7.96□□□□□ -1.13
GPNMB-202ENST00000381990 CMSS1Q9BQ75 279 aaKnown RBP7.96□□□□□ -1.13
GPNMB-202ENST00000381990 NRIP2Q9BQI9 281 aa7.96□□□□□ -1.13
GPNMB-202ENST00000381990 RTN4RQ9BZR6 473 aa7.96□□□□□ -1.13
GPNMB-202ENST00000381990 EGLN1Q9GZT9 426 aa7.96□□□□□ -1.13
GPNMB-202ENST00000381990 ADAM19Q9H013 955 aa7.96□□□□□ -1.13
GPNMB-202ENST00000381990 KCNK15Q9H427 330 aa7.96□□□□□ -1.13
GPNMB-202ENST00000381990 ELOVL3Q9HB03 270 aa7.96□□□□□ -1.13
GPNMB-202ENST00000381990 KLK13Q9UKR3 277 aa7.96□□□□□ -1.13
GPNMB-202ENST00000381990 POMT1Q9Y6A1 747 aa7.96□□□□□ -1.13
GPNMB-202ENST00000381990 EIF3GO75821 320 aaKnown RBP eCLIP7.96□□□□□ -1.14
GPNMB-202ENST00000381990 STK17BO94768 372 aa7.96□□□□□ -1.14
GPNMB-202ENST00000381990 FBXO45P0C2W1 286 aa7.96□□□□□ -1.14
GPNMB-202ENST00000381990 ZNF28P17035 718 aa7.96□□□□□ -1.14
GPNMB-202ENST00000381990 NPBWR1P48145 328 aa7.96□□□□□ -1.14
GPNMB-202ENST00000381990 KCNJ3P48549 501 aa7.96□□□□□ -1.14
GPNMB-202ENST00000381990 CAV2P51636 162 aa7.96□□□□□ -1.14
GPNMB-202ENST00000381990 POLR2GP62487 172 aaKnown RBP eCLIP7.96□□□□□ -1.14
GPNMB-202ENST00000381990 RPL18Q07020 188 aaKnown RBP7.96□□□□□ -1.14
GPNMB-202ENST00000381990 ZFP36L1Q07352 338 aaKnown RBP7.96□□□□□ -1.14
GPNMB-202ENST00000381990 ECH1Q13011 328 aa7.96□□□□□ -1.14
GPNMB-202ENST00000381990 MEP1BQ16820 701 aa7.96□□□□□ -1.14
GPNMB-202ENST00000381990 PLEKHN1Q494U1 663 aaPredicted RBP7.96□□□□□ -1.14
GPNMB-202ENST00000381990 RNF212Q495C1 297 aa7.96□□□□□ -1.14
GPNMB-202ENST00000381990 CDNFQ49AH0 187 aa7.96□□□□□ -1.14
GPNMB-202ENST00000381990 ASPHD2Q6ICH7 369 aa7.96□□□□□ -1.14
GPNMB-202ENST00000381990 PAQR4Q8N4S7 273 aaPredicted RBP7.96□□□□□ -1.14
GPNMB-202ENST00000381990 NUBPLQ8TB37 319 aa7.96□□□□□ -1.14
GPNMB-202ENST00000381990 SLC39A7Q92504 469 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms