RNA–Protein interactions for RNA: ENST00000377670.8

HIF3A-205, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HIF3A, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-205ENST00000377670 OTPQ5XKR4 325 aa9.78□□□□□ -0.84
HIF3A-205ENST00000377670 B3GNTL1Q67FW5 361 aaPredicted RBP9.78□□□□□ -0.84
HIF3A-205ENST00000377670 LINC00299Q6ZSB3 139 aa9.78□□□□□ -0.84
HIF3A-205ENST00000377670 Q6ZTK2 550 aa9.78□□□□□ -0.84
HIF3A-205ENST00000377670 NAA40Q86UY6 237 aa9.78□□□□□ -0.84
HIF3A-205ENST00000377670 NKAIN4Q8IVV8 208 aa9.78□□□□□ -0.84
HIF3A-205ENST00000377670 BSCL2Q96G97 398 aaPredicted RBP9.78□□□□□ -0.84
HIF3A-205ENST00000377670 MAP6Q96JE9 813 aa9.78□□□□□ -0.84
HIF3A-205ENST00000377670 NMNAT3Q96T66 252 aa9.78□□□□□ -0.84
HIF3A-205ENST00000377670 MOKQ9UQ07 419 aa9.78□□□□□ -0.84
HIF3A-205ENST00000377670 ANKUB1A6NFN9 424 aa9.78□□□□□ -0.84
HIF3A-205ENST00000377670 CLN5O75503 358 aa9.78□□□□□ -0.84
HIF3A-205ENST00000377670 OR2C1O95371 312 aa9.78□□□□□ -0.84
HIF3A-205ENST00000377670 CCL4P13236 92 aa9.78□□□□□ -0.84
HIF3A-205ENST00000377670 SRMP19623 302 aa9.78□□□□□ -0.84
HIF3A-205ENST00000377670 LAP3P28838 519 aa9.78□□□□□ -0.84
HIF3A-205ENST00000377670 FOXK2Q01167 660 aa9.78□□□□□ -0.84
HIF3A-205ENST00000377670 CSRP2Q16527 193 aa9.78□□□□□ -0.84
HIF3A-205ENST00000377670 AANATQ16613 207 aa9.78□□□□□ -0.84
HIF3A-205ENST00000377670 IAH1Q2TAA2 248 aaPredicted RBP9.78□□□□□ -0.84
HIF3A-205ENST00000377670 SAXO2Q658L1 398 aa9.78□□□□□ -0.84
HIF3A-205ENST00000377670 OR56B1Q8NGI3 324 aa9.78□□□□□ -0.84
HIF3A-205ENST00000377670 DAZAP1Q96EP5 407 aaKnown RBP9.78□□□□□ -0.84
HIF3A-205ENST00000377670 ERRFI1Q9UJM3 462 aaPredicted RBP9.78□□□□□ -0.84
HIF3A-205ENST00000377670 ETV7Q9Y603 341 aa9.78□□□□□ -0.84
HIF3A-205ENST00000377670 HMGN4O00479 90 aa9.78□□□□□ -0.84
HIF3A-205ENST00000377670 PRF1P14222 555 aa9.78□□□□□ -0.84
HIF3A-205ENST00000377670 SPI1P17947 270 aa9.78□□□□□ -0.84
HIF3A-205ENST00000377670 PNLIPRP2P54317 469 aa9.78□□□□□ -0.84
HIF3A-205ENST00000377670 PFN4Q8NHR9 129 aa9.78□□□□□ -0.84
HIF3A-205ENST00000377670 TXN2Q99757 166 aa9.78□□□□□ -0.84
HIF3A-205ENST00000377670 SUCNR1Q9BXA5 334 aa9.78□□□□□ -0.84
HIF3A-205ENST00000377670 SLC39A9Q9NUM3 307 aa9.78□□□□□ -0.84
HIF3A-205ENST00000377670 KPTNQ9Y664 436 aa9.78□□□□□ -0.84
HIF3A-205ENST00000377670 AHCTF1Q8WYP5 2266 aa9.78□□□□□ -0.84
HIF3A-205ENST00000377670 TO15178 435 aa9.78□□□□□ -0.84
HIF3A-205ENST00000377670 QDPRP09417 244 aa9.78□□□□□ -0.84
HIF3A-205ENST00000377670 KITLGP21583 273 aa9.78□□□□□ -0.84
HIF3A-205ENST00000377670 PTBP1P26599 531 aaKnown RBP eCLIP9.78□□□□□ -0.84
HIF3A-205ENST00000377670 HSF1Q00613 529 aa9.78□□□□□ -0.84
HIF3A-205ENST00000377670 BAXQ07812 192 aa9.78□□□□□ -0.84
HIF3A-205ENST00000377670 CRMP1Q14194 572 aa9.78□□□□□ -0.84
HIF3A-205ENST00000377670 PDLIM3Q53GG5 364 aaPredicted RBP9.78□□□□□ -0.84
HIF3A-205ENST00000377670 SMIM15Q7Z3B0 74 aa9.78□□□□□ -0.84
HIF3A-205ENST00000377670 OR1J1Q8NGS3 322 aa9.78□□□□□ -0.84
HIF3A-205ENST00000377670 CACNA1IQ9P0X4 2223 aa9.78□□□□□ -0.84
HIF3A-205ENST00000377670 ZFP92A6NM28 416 aa9.77□□□□□ -0.84
HIF3A-205ENST00000377670 CDC14BO60729 498 aa9.77□□□□□ -0.84
HIF3A-205ENST00000377670 NPY4RP50391 375 aa9.77□□□□□ -0.84
HIF3A-205ENST00000377670 OR2B8PP59922 312 aa9.77□□□□□ -0.84
HIF3A-205ENST00000377670 ZNF547Q8IVP9 402 aa9.77□□□□□ -0.84
HIF3A-205ENST00000377670 RDH10Q8IZV5 341 aa9.77□□□□□ -0.84
HIF3A-205ENST00000377670 TP53I13Q8NBR0 393 aaPredicted RBP9.77□□□□□ -0.84
HIF3A-205ENST00000377670 RELL2Q8NC24 303 aaPredicted RBP9.77□□□□□ -0.84
HIF3A-205ENST00000377670 OR5D18Q8NGL1 313 aa9.77□□□□□ -0.84
HIF3A-205ENST00000377670 SLC35A4Q96G79 324 aa9.77□□□□□ -0.84
HIF3A-205ENST00000377670 WWTR1Q9GZV5 400 aa9.77□□□□□ -0.84
HIF3A-205ENST00000377670 AKIP1Q9NQ31 210 aa9.77□□□□□ -0.84
HIF3A-205ENST00000377670 SPTBP11277 2137 aa9.77□□□□□ -0.84
HIF3A-205ENST00000377670 NCBP2LA6PVI3 153 aaKnown RBP9.77□□□□□ -0.85
HIF3A-205ENST00000377670 PDGFBP01127 241 aaPredicted RBP9.77□□□□□ -0.85
HIF3A-205ENST00000377670 BMI1P35226 326 aa9.77□□□□□ -0.85
HIF3A-205ENST00000377670 DGCR2P98153 550 aa9.77□□□□□ -0.85
HIF3A-205ENST00000377670 INSM1Q01101 510 aaPredicted RBP9.77□□□□□ -0.85
HIF3A-205ENST00000377670 PRTGQ2VWP7 1150 aa9.77□□□□□ -0.85
HIF3A-205ENST00000377670 CLEC2AQ6UVW9 174 aa9.77□□□□□ -0.85
HIF3A-205ENST00000377670 OVCH1Q7RTY7 1134 aa9.77□□□□□ -0.85
HIF3A-205ENST00000377670 ZNF441Q8N8Z8 693 aa9.77□□□□□ -0.85
HIF3A-205ENST00000377670 EMC6Q9BV81 110 aa9.77□□□□□ -0.85
HIF3A-205ENST00000377670 SELENOIQ9C0D9 397 aa9.77□□□□□ -0.85
HIF3A-205ENST00000377670 MYOZ1Q9NP98 299 aaPredicted RBP9.77□□□□□ -0.85
HIF3A-205ENST00000377670 PIGLQ9Y2B2 252 aa9.77□□□□□ -0.85
HIF3A-205ENST00000377670 GREB1LQ9C091 1923 aaPredicted RBP9.77□□□□□ -0.85
HIF3A-205ENST00000377670 A1L4Q6 167 aa9.77□□□□□ -0.85
HIF3A-205ENST00000377670 NME2P1O60361 137 aa9.77□□□□□ -0.85
HIF3A-205ENST00000377670 MOSPD3O75425 235 aa9.77□□□□□ -0.85
HIF3A-205ENST00000377670 BSGP35613 385 aa9.77□□□□□ -0.85
HIF3A-205ENST00000377670 PPP1CAP62136 330 aa9.77□□□□□ -0.85
HIF3A-205ENST00000377670 SNRPGP62308 76 aaKnown RBP9.77□□□□□ -0.85
HIF3A-205ENST00000377670 TMEM88Q6PEY1 159 aa9.77□□□□□ -0.85
HIF3A-205ENST00000377670 CARFQ8N187 725 aa9.77□□□□□ -0.85
HIF3A-205ENST00000377670 PLPP7Q8NBV4 271 aa9.77□□□□□ -0.85
HIF3A-205ENST00000377670 OR52N1Q8NH53 320 aa9.77□□□□□ -0.85
HIF3A-205ENST00000377670 ZNF75AQ96N20 296 aa9.77□□□□□ -0.85
HIF3A-205ENST00000377670 C1QTNF3Q9BXJ4 246 aa9.77□□□□□ -0.85
HIF3A-205ENST00000377670 MRPS28Q9Y2Q9 187 aaKnown RBP9.77□□□□□ -0.85
HIF3A-205ENST00000377670 ZNF638Q14966 1978 aaKnown RBP9.77□□□□□ -0.85
HIF3A-205ENST00000377670 ZC3H12DA2A288 527 aaKnown RBP9.77□□□□□ -0.85
HIF3A-205ENST00000377670 M0R082 166 aa9.77□□□□□ -0.85
HIF3A-205ENST00000377670 NAT1P18440 290 aa9.77□□□□□ -0.85
HIF3A-205ENST00000377670 UBE2IP63279 158 aaKnown RBP9.77□□□□□ -0.85
HIF3A-205ENST00000377670 FAM3DQ96BQ1 224 aa9.77□□□□□ -0.85
HIF3A-205ENST00000377670 OXGR1Q96P68 337 aa9.77□□□□□ -0.85
HIF3A-205ENST00000377670 LAT2Q9GZY6 243 aa9.77□□□□□ -0.85
HIF3A-205ENST00000377670 S1PR5Q9H228 398 aa9.77□□□□□ -0.85
HIF3A-205ENST00000377670 ZFP64Q9NPA5 681 aa9.77□□□□□ -0.85
HIF3A-205ENST00000377670 SH2D1BO14796 132 aa9.77□□□□□ -0.85
HIF3A-205ENST00000377670 ADH4P08319 380 aa9.77□□□□□ -0.85
HIF3A-205ENST00000377670 ALKBH1Q13686 389 aaKnown RBP9.77□□□□□ -0.85
HIF3A-205ENST00000377670 PWWP2BQ6NUJ5 590 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms