RNA–Protein interactions for RNA: ENST00000376496.4

CLCN6-206, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5 BASIC

Gene CLCN6, Length 2,922 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-206ENST00000376496 TRIM63Q969Q1 353 aa11.01□□□□□ -0.65
CLCN6-206ENST00000376496 CYYR1Q96J86 154 aa11.01□□□□□ -0.65
CLCN6-206ENST00000376496 RNF121Q9H920 327 aa11.01□□□□□ -0.65
CLCN6-206ENST00000376496 FOXJ3Q9UPW0 622 aa11.01□□□□□ -0.65
CLCN6-206ENST00000376496 GTF3C1Q12789 2109 aa11□□□□□ -0.65
CLCN6-206ENST00000376496 ZNF587BE7ETH6 402 aa11□□□□□ -0.65
CLCN6-206ENST00000376496 BOLA2-SMG1P6H3BVE0 249 aa11□□□□□ -0.65
CLCN6-206ENST00000376496 SLC17A2O00624 439 aa11□□□□□ -0.65
CLCN6-206ENST00000376496 FSTP19883 344 aa11□□□□□ -0.65
CLCN6-206ENST00000376496 CRYGSP22914 178 aa11□□□□□ -0.65
CLCN6-206ENST00000376496 AGTR1P30556 359 aa11□□□□□ -0.65
CLCN6-206ENST00000376496 KIR2DL3P43628 341 aa11□□□□□ -0.65
CLCN6-206ENST00000376496 ART1P52961 327 aa11□□□□□ -0.65
CLCN6-206ENST00000376496 ASAH1Q13510 395 aa11□□□□□ -0.65
CLCN6-206ENST00000376496 ZNF169Q14929 603 aaPredicted RBP11□□□□□ -0.65
CLCN6-206ENST00000376496 RAB35Q15286 201 aa11□□□□□ -0.65
CLCN6-206ENST00000376496 RHOUQ7L0Q8 258 aa11□□□□□ -0.65
CLCN6-206ENST00000376496 P4HA3Q7Z4N8 544 aa11□□□□□ -0.65
CLCN6-206ENST00000376496 OR1M1Q8NGA1 313 aa11□□□□□ -0.65
CLCN6-206ENST00000376496 FAM46BQ96A09 425 aa11□□□□□ -0.65
CLCN6-206ENST00000376496 SLC25A28Q96A46 364 aa11□□□□□ -0.65
CLCN6-206ENST00000376496 RFT1Q96AA3 541 aa11□□□□□ -0.65
CLCN6-206ENST00000376496 CNTD2Q9H8S5 307 aa11□□□□□ -0.65
CLCN6-206ENST00000376496 PARPBPQ9NWS1 579 aa11□□□□□ -0.65
CLCN6-206ENST00000376496 PRR14LQ5THK1 2151 aa11□□□□□ -0.65
CLCN6-206ENST00000376496 TMEM272A0A1B0GTI8 110 aa11□□□□□ -0.65
CLCN6-206ENST00000376496 LCATP04180 440 aa11□□□□□ -0.65
CLCN6-206ENST00000376496 CALCBP10092 127 aa11□□□□□ -0.65
CLCN6-206ENST00000376496 HTR2CP28335 458 aa11□□□□□ -0.65
CLCN6-206ENST00000376496 RNPS1Q15287 305 aaKnown RBP11□□□□□ -0.65
CLCN6-206ENST00000376496 HIKESHIQ53FT3 197 aa11□□□□□ -0.65
CLCN6-206ENST00000376496 GLT8D1Q68CQ7 371 aa11□□□□□ -0.65
CLCN6-206ENST00000376496 PYHIN1Q6K0P9 492 aa11□□□□□ -0.65
CLCN6-206ENST00000376496 PLEKHA1Q9HB21 404 aa11□□□□□ -0.65
CLCN6-206ENST00000376496 SLC17A5Q9NRA2 495 aa11□□□□□ -0.65
CLCN6-206ENST00000376496 A0A1W2PR80 420 aa10.99□□□□□ -0.65
CLCN6-206ENST00000376496 MEIOCA2RUB1 952 aa10.99□□□□□ -0.65
CLCN6-206ENST00000376496 UBL3O95164 117 aa10.99□□□□□ -0.65
CLCN6-206ENST00000376496 IGHG3P01860 377 aa10.99□□□□□ -0.65
CLCN6-206ENST00000376496 HLA-DQB1P01920 261 aa10.99□□□□□ -0.65
CLCN6-206ENST00000376496 MMP7P09237 267 aaPredicted RBP10.99□□□□□ -0.65
CLCN6-206ENST00000376496 CD79AP11912 226 aa10.99□□□□□ -0.65
CLCN6-206ENST00000376496 OTX1P32242 354 aaPredicted RBP10.99□□□□□ -0.65
CLCN6-206ENST00000376496 SCRN3Q0VDG4 424 aa10.99□□□□□ -0.65
CLCN6-206ENST00000376496 RIN1Q13671 783 aa10.99□□□□□ -0.65
CLCN6-206ENST00000376496 TMEM69Q5SWH9 247 aa10.99□□□□□ -0.65
CLCN6-206ENST00000376496 FAM166AQ6J272 317 aa10.99□□□□□ -0.65
CLCN6-206ENST00000376496 SPACA3Q8IXA5 215 aa10.99□□□□□ -0.65
CLCN6-206ENST00000376496 MINDY2Q8NBR6 621 aa10.99□□□□□ -0.65
CLCN6-206ENST00000376496 OR5D18Q8NGL1 313 aa10.99□□□□□ -0.65
CLCN6-206ENST00000376496 OR14K1Q8NGZ2 314 aa10.99□□□□□ -0.65
CLCN6-206ENST00000376496 YIPF5Q969M3 257 aa10.99□□□□□ -0.65
CLCN6-206ENST00000376496 ITFG2Q969R8 447 aa10.99□□□□□ -0.65
CLCN6-206ENST00000376496 SPTSSAQ969W0 71 aa10.99□□□□□ -0.65
CLCN6-206ENST00000376496 SGK3Q96BR1 496 aa10.99□□□□□ -0.65
CLCN6-206ENST00000376496 MOB1AQ9H8S9 216 aa10.99□□□□□ -0.65
CLCN6-206ENST00000376496 TIMM10BQ9Y5J6 103 aa10.99□□□□□ -0.65
CLCN6-206ENST00000376496 MEIS3P1A6NDR6 274 aa10.99□□□□□ -0.65
CLCN6-206ENST00000376496 ZNF724A8MTY0 619 aa10.99□□□□□ -0.65
CLCN6-206ENST00000376496 CTSSP25774 331 aa10.99□□□□□ -0.65
CLCN6-206ENST00000376496 BDKRB2P30411 391 aa10.99□□□□□ -0.65
CLCN6-206ENST00000376496 DDOSTP39656 456 aa10.99□□□□□ -0.65
CLCN6-206ENST00000376496 PTH2RP49190 550 aa10.99□□□□□ -0.65
CLCN6-206ENST00000376496 TSC22D1Q15714 1073 aa10.99□□□□□ -0.65
CLCN6-206ENST00000376496 RTN4RL2Q86UN3 420 aa10.99□□□□□ -0.65
CLCN6-206ENST00000376496 OR5AS1Q8N127 324 aa10.99□□□□□ -0.65
CLCN6-206ENST00000376496 S100A16Q96FQ6 103 aaKnown RBP10.99□□□□□ -0.65
CLCN6-206ENST00000376496 ZMAT3Q9HA38 289 aaKnown RBP10.99□□□□□ -0.65
CLCN6-206ENST00000376496 NLKQ9UBE8 527 aa10.99□□□□□ -0.65
CLCN6-206ENST00000376496 IGKV1-9A0A0C4DH69 117 aa10.98□□□□□ -0.65
CLCN6-206ENST00000376496 OR6C6A6NF89 314 aa10.98□□□□□ -0.65
CLCN6-206ENST00000376496 LYRM1O43325 122 aa10.98□□□□□ -0.65
CLCN6-206ENST00000376496 FARS2O95363 451 aaKnown RBP10.98□□□□□ -0.65
CLCN6-206ENST00000376496 ARSBP15848 533 aa10.98□□□□□ -0.65
CLCN6-206ENST00000376496 RAB25P57735 213 aa10.98□□□□□ -0.65
CLCN6-206ENST00000376496 PLEKHN1Q494U1 663 aaPredicted RBP10.98□□□□□ -0.65
CLCN6-206ENST00000376496 C3P1Q6ZMU1 363 aa10.98□□□□□ -0.65
CLCN6-206ENST00000376496 RBMXL3Q8N7X1 1067 aaKnown RBP10.98□□□□□ -0.65
CLCN6-206ENST00000376496 OR5D14Q8NGL3 314 aa10.98□□□□□ -0.65
CLCN6-206ENST00000376496 OR52I2Q8NH67 350 aa10.98□□□□□ -0.65
CLCN6-206ENST00000376496 RNF170Q96K19 258 aa10.98□□□□□ -0.65
CLCN6-206ENST00000376496 ATG5Q9H1Y0 275 aa10.98□□□□□ -0.65
CLCN6-206ENST00000376496 KLK11Q9UBX7 282 aa10.98□□□□□ -0.65
CLCN6-206ENST00000376496 ELF5Q9UKW6 265 aaPredicted RBP10.98□□□□□ -0.65
CLCN6-206ENST00000376496 PTPRQQ9UMZ3 2332 aa10.98□□□□□ -0.65
CLCN6-206ENST00000376496 RAB3AP20336 220 aa10.98□□□□□ -0.65
CLCN6-206ENST00000376496 ACKR3P25106 362 aa10.98□□□□□ -0.65
CLCN6-206ENST00000376496 MAP2K3P46734 347 aa10.98□□□□□ -0.65
CLCN6-206ENST00000376496 GUCA2AQ02747 115 aa10.98□□□□□ -0.65
CLCN6-206ENST00000376496 GPR176Q14439 515 aa10.98□□□□□ -0.65
CLCN6-206ENST00000376496 SLC36A2Q495M3 483 aa10.98□□□□□ -0.65
CLCN6-206ENST00000376496 ZNF585AQ6P3V2 769 aa10.98□□□□□ -0.65
CLCN6-206ENST00000376496 DOK3Q7L591 496 aa10.98□□□□□ -0.65
CLCN6-206ENST00000376496 CNEP1R1Q8N9A8 125 aa10.98□□□□□ -0.65
CLCN6-206ENST00000376496 SETD6Q8TBK2 473 aa10.98□□□□□ -0.65
CLCN6-206ENST00000376496 THRSPQ92748 146 aa10.98□□□□□ -0.65
CLCN6-206ENST00000376496 EXTL1Q92935 676 aa10.98□□□□□ -0.65
CLCN6-206ENST00000376496 HAVCR1Q96D42 359 aa10.98□□□□□ -0.65
CLCN6-206ENST00000376496 MS4A3Q96HJ5 214 aa10.98□□□□□ -0.65
CLCN6-206ENST00000376496 LINC00470Q9BZP3 86 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms