RNA–Protein interactions for RNA: ENST00000376492.3

CLCN6-205, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 1,062 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-205ENST00000376492 EMC7Q9NPA0 242 aa11.06□□□□□ -0.64
CLCN6-205ENST00000376492 B9D1Q9UPM9 204 aa11.06□□□□□ -0.64
CLCN6-205ENST00000376492 BAIAP2Q9UQB8 552 aa11.06□□□□□ -0.64
CLCN6-205ENST00000376492 AUP1Q9Y679 476 aa11.06□□□□□ -0.64
CLCN6-205ENST00000376492 LOC100509620A0A075B734 347 aa11.05□□□□□ -0.64
CLCN6-205ENST00000376492 PPIAL4EA0A075B759 164 aa11.05□□□□□ -0.64
CLCN6-205ENST00000376492 IGHV3OR16-10A0A075B7F0 116 aa11.05□□□□□ -0.64
CLCN6-205ENST00000376492 IGLV1-36A0A0B4J1U3 117 aa11.05□□□□□ -0.64
CLCN6-205ENST00000376492 PPIAL4CA0A0B4J2A2 164 aa11.05□□□□□ -0.64
CLCN6-205ENST00000376492 OR6C68A6NDL8 312 aa11.05□□□□□ -0.64
CLCN6-205ENST00000376492 POM121CA8CG34 1229 aa11.05□□□□□ -0.64
CLCN6-205ENST00000376492 PPIAL4DF5H284 164 aa11.05□□□□□ -0.64
CLCN6-205ENST00000376492 PPIAL4FP0DN26 164 aa11.05□□□□□ -0.64
CLCN6-205ENST00000376492 OMGP23515 440 aa11.05□□□□□ -0.64
CLCN6-205ENST00000376492 APLNRP35414 380 aa11.05□□□□□ -0.64
CLCN6-205ENST00000376492 WNT5AP41221 380 aa11.05□□□□□ -0.64
CLCN6-205ENST00000376492 CRISP1P54107 249 aa11.05□□□□□ -0.64
CLCN6-205ENST00000376492 CXCR4P61073 352 aa11.05□□□□□ -0.64
CLCN6-205ENST00000376492 SLC35F1Q5T1Q4 408 aa11.05□□□□□ -0.64
CLCN6-205ENST00000376492 OR52E2Q8NGJ4 325 aa11.05□□□□□ -0.64
CLCN6-205ENST00000376492 SLC25A28Q96A46 364 aa11.05□□□□□ -0.64
CLCN6-205ENST00000376492 TSSK2Q96PF2 358 aa11.05□□□□□ -0.64
CLCN6-205ENST00000376492 DCLRE1CQ96SD1 692 aaKnown RBP11.05□□□□□ -0.64
CLCN6-205ENST00000376492 TSSK6Q9BXA6 273 aa11.05□□□□□ -0.64
CLCN6-205ENST00000376492 RERGLQ9H628 205 aa11.05□□□□□ -0.64
CLCN6-205ENST00000376492 SRA1Q9HD15 236 aaKnown RBP11.05□□□□□ -0.64
CLCN6-205ENST00000376492 ZAR1LA6NP61 321 aa11.04□□□□□ -0.64
CLCN6-205ENST00000376492 CLDN34H7C241 214 aa11.04□□□□□ -0.64
CLCN6-205ENST00000376492 ICMTO60725 284 aa11.04□□□□□ -0.64
CLCN6-205ENST00000376492 IGHV2-70P01814 119 aa11.04□□□□□ -0.64
CLCN6-205ENST00000376492 SBK2P0C263 348 aa11.04□□□□□ -0.64
CLCN6-205ENST00000376492 COX5BP10606 129 aa11.04□□□□□ -0.64
CLCN6-205ENST00000376492 ZNF12P17014 697 aa11.04□□□□□ -0.64
CLCN6-205ENST00000376492 GDI2P50395 445 aaKnown RBP11.04□□□□□ -0.64
CLCN6-205ENST00000376492 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.04□□□□□ -0.64
CLCN6-205ENST00000376492 SCRN3Q0VDG4 424 aa11.04□□□□□ -0.64
CLCN6-205ENST00000376492 AQP6Q13520 282 aa11.04□□□□□ -0.64
CLCN6-205ENST00000376492 MOGQ16653 247 aa11.04□□□□□ -0.64
CLCN6-205ENST00000376492 SLC25A30Q5SVS4 291 aa11.04□□□□□ -0.64
CLCN6-205ENST00000376492 ZNF774Q6NX45 483 aa11.04□□□□□ -0.64
CLCN6-205ENST00000376492 RFPL4BQ6ZWI9 263 aa11.04□□□□□ -0.64
CLCN6-205ENST00000376492 OR2T33Q8NG76 320 aa11.04□□□□□ -0.64
CLCN6-205ENST00000376492 SLC25A40Q8TBP6 338 aa11.04□□□□□ -0.64
CLCN6-205ENST00000376492 FBLIM1Q8WUP2 373 aa11.04□□□□□ -0.64
CLCN6-205ENST00000376492 MARS2Q96GW9 593 aaKnown RBP11.04□□□□□ -0.64
CLCN6-205ENST00000376492 MBOAT4Q96T53 435 aa11.04□□□□□ -0.64
CLCN6-205ENST00000376492 SLITRK2Q9H156 845 aa11.04□□□□□ -0.64
CLCN6-205ENST00000376492 SLC25A19Q9HC21 320 aa11.04□□□□□ -0.64
CLCN6-205ENST00000376492 RPRD1BQ9NQG5 326 aaKnown RBP11.04□□□□□ -0.64
CLCN6-205ENST00000376492 TBC1D23Q9NUY8 699 aa11.04□□□□□ -0.64
CLCN6-205ENST00000376492 INSIG2Q9Y5U4 225 aa11.04□□□□□ -0.64
CLCN6-205ENST00000376492 MDFIC2A0A1B0GVS7 189 aa11.03□□□□□ -0.64
CLCN6-205ENST00000376492 PLSCR5A0PG75 271 aa11.03□□□□□ -0.64
CLCN6-205ENST00000376492 C5orf49A4QMS7 147 aa11.03□□□□□ -0.64
CLCN6-205ENST00000376492 GPANK1O95872 356 aa11.03□□□□□ -0.64
CLCN6-205ENST00000376492 HMGN1P05114 100 aa11.03□□□□□ -0.64
CLCN6-205ENST00000376492 IGHV4-38-2P0DP08 117 aa11.03□□□□□ -0.64
CLCN6-205ENST00000376492 GCH1P30793 250 aa11.03□□□□□ -0.64
CLCN6-205ENST00000376492 GGT2P36268 569 aa11.03□□□□□ -0.64
CLCN6-205ENST00000376492 CDC42P60953 191 aa11.03□□□□□ -0.64
CLCN6-205ENST00000376492 HIST1H3AP68431 136 aa11.03□□□□□ -0.64
CLCN6-205ENST00000376492 CDK5Q00535 292 aa11.03□□□□□ -0.64
CLCN6-205ENST00000376492 SLC3A1Q07837 685 aa11.03□□□□□ -0.64
CLCN6-205ENST00000376492 PTGES3Q15185 160 aaKnown RBP11.03□□□□□ -0.64
CLCN6-205ENST00000376492 HIST2H3PS2Q5TEC6 136 aa11.03□□□□□ -0.64
CLCN6-205ENST00000376492 ZNF691Q5VV52 312 aa11.03□□□□□ -0.64
CLCN6-205ENST00000376492 SLX4IPQ5VYV7 408 aa11.03□□□□□ -0.64
CLCN6-205ENST00000376492 SLC27A4Q6P1M0 643 aa11.03□□□□□ -0.64
CLCN6-205ENST00000376492 HIST2H3AQ71DI3 136 aa11.03□□□□□ -0.64
CLCN6-205ENST00000376492 SPATC1Q76KD6 591 aa11.03□□□□□ -0.64
CLCN6-205ENST00000376492 THAP5Q7Z6K1 395 aa11.03□□□□□ -0.64
CLCN6-205ENST00000376492 C1orf174Q8IYL3 243 aa11.03□□□□□ -0.64
CLCN6-205ENST00000376492 C8orf59Q8N0T1 100 aaPredicted RBP11.03□□□□□ -0.64
CLCN6-205ENST00000376492 SDR9C7Q8NEX9 313 aa11.03□□□□□ -0.64
CLCN6-205ENST00000376492 OR4Q3Q8NH05 313 aa11.03□□□□□ -0.64
CLCN6-205ENST00000376492 KLF14Q8TD94 323 aaPredicted RBP11.03□□□□□ -0.64
CLCN6-205ENST00000376492 TMIGD2Q96BF3 282 aa11.03□□□□□ -0.64
CLCN6-205ENST00000376492 OR2J1Q9GZK6 312 aa11.03□□□□□ -0.64
CLCN6-205ENST00000376492 EGLN1Q9GZT9 426 aa11.03□□□□□ -0.64
CLCN6-205ENST00000376492 MS4A7Q9GZW8 240 aaPredicted RBP11.03□□□□□ -0.64
CLCN6-205ENST00000376492 MSL2Q9HCI7 577 aa11.03□□□□□ -0.64
CLCN6-205ENST00000376492 EIF3KQ9UBQ5 218 aaKnown RBP11.03□□□□□ -0.64
CLCN6-205ENST00000376492 KLHL21Q9UJP4 597 aa11.03□□□□□ -0.64
CLCN6-205ENST00000376492 NPTNQ9Y639 398 aa11.03□□□□□ -0.64
CLCN6-205ENST00000376492 SGCEO43556 437 aa11.02□□□□□ -0.65
CLCN6-205ENST00000376492 SOX14O95416 240 aa11.02□□□□□ -0.65
CLCN6-205ENST00000376492 SLC6A9P48067 706 aa11.02□□□□□ -0.65
CLCN6-205ENST00000376492 CENPAP49450 140 aa11.02□□□□□ -0.65
CLCN6-205ENST00000376492 ISL1P61371 349 aa11.02□□□□□ -0.65
CLCN6-205ENST00000376492 ZNF718Q3SXZ3 478 aa11.02□□□□□ -0.65
CLCN6-205ENST00000376492 CCDC92Q53HC0 331 aaPredicted RBP11.02□□□□□ -0.65
CLCN6-205ENST00000376492 MBNL2Q5VZF2 373 aaKnown RBP11.02□□□□□ -0.65
CLCN6-205ENST00000376492 UNQ6126/PRO20091Q6UXV3 157 aa11.02□□□□□ -0.65
CLCN6-205ENST00000376492 VASH1Q7L8A9 365 aaPredicted RBP11.02□□□□□ -0.65
CLCN6-205ENST00000376492 SLC37A3Q8NCC5 494 aa11.02□□□□□ -0.65
CLCN6-205ENST00000376492 GJC3Q8NFK1 279 aa11.02□□□□□ -0.65
CLCN6-205ENST00000376492 SLC26A10Q8NG04 563 aa11.02□□□□□ -0.65
CLCN6-205ENST00000376492 OR2T4Q8NH00 348 aa11.02□□□□□ -0.65
CLCN6-205ENST00000376492 ABHD4Q8TB40 342 aa11.02□□□□□ -0.65
CLCN6-205ENST00000376492 TEX47Q8TBZ9 253 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms