RNA–Protein interactions for RNA: ENST00000362378.1

RNU6-28P-201, Transcript of RNA, U6 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU6-28P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-28P-201ENST00000362378 TMEM104Q8NE00 496 aa2.32□□□□□ -2.04
RNU6-28P-201ENST00000362378 OR10G6Q8NH81 332 aa2.32□□□□□ -2.04
RNU6-28P-201ENST00000362378 COQ8AQ8NI60 647 aa2.32□□□□□ -2.04
RNU6-28P-201ENST00000362378 PDXPQ96GD0 296 aa2.32□□□□□ -2.04
RNU6-28P-201ENST00000362378 HSD17B10Q99714 261 aaKnown RBP2.32□□□□□ -2.04
RNU6-28P-201ENST00000362378 NDFIP1Q9BT67 221 aa2.32□□□□□ -2.04
RNU6-28P-201ENST00000362378 SAMD10Q9BYL1 202 aa2.32□□□□□ -2.04
RNU6-28P-201ENST00000362378 VCXQ9H320 206 aa2.32□□□□□ -2.04
RNU6-28P-201ENST00000362378 TMEM27Q9HBJ8 222 aa2.32□□□□□ -2.04
RNU6-28P-201ENST00000362378 MYOZ1Q9NP98 299 aaPredicted RBP2.32□□□□□ -2.04
RNU6-28P-201ENST00000362378 RGS18Q9NS28 235 aa2.32□□□□□ -2.04
RNU6-28P-201ENST00000362378 ZNRD1Q9P1U0 126 aa2.32□□□□□ -2.04
RNU6-28P-201ENST00000362378 ZNF222Q9UK12 451 aa2.32□□□□□ -2.04
RNU6-28P-201ENST00000362378 KLK12Q9UKR0 248 aa2.32□□□□□ -2.04
RNU6-28P-201ENST00000362378 HYOU1Q9Y4L1 999 aa2.32□□□□□ -2.04
RNU6-28P-201ENST00000362378 TSSC4Q9Y5U2 329 aaPredicted RBP2.32□□□□□ -2.04
RNU6-28P-201ENST00000362378 NACAE9PAV3 2078 aa2.31□□□□□ -2.04
RNU6-28P-201ENST00000362378 IGHV1OR15-9A0A0B4J2B8 117 aa2.31□□□□□ -2.04
RNU6-28P-201ENST00000362378 IGHV1-69DA0A0B4J2H0 117 aa2.31□□□□□ -2.04
RNU6-28P-201ENST00000362378 LOC100653049A0A140TA62 436 aa2.31□□□□□ -2.04
RNU6-28P-201ENST00000362378 A0A1W2PRF3 423 aa2.31□□□□□ -2.04
RNU6-28P-201ENST00000362378 A0A1W2PRM7 423 aa2.31□□□□□ -2.04
RNU6-28P-201ENST00000362378 CENPXA8MT69 81 aa2.31□□□□□ -2.04
RNU6-28P-201ENST00000362378 KDELR3O43731 214 aa2.31□□□□□ -2.04
RNU6-28P-201ENST00000362378 REM1O75628 298 aa2.31□□□□□ -2.04
RNU6-28P-201ENST00000362378 KRT34O76011 436 aa2.31□□□□□ -2.04
RNU6-28P-201ENST00000362378 CSTAP01040 98 aa2.31□□□□□ -2.04
RNU6-28P-201ENST00000362378 CD37P11049 281 aa2.31□□□□□ -2.04
RNU6-28P-201ENST00000362378 TCP1P17987 556 aaKnown RBP2.31□□□□□ -2.04
RNU6-28P-201ENST00000362378 MYL9P24844 172 aa2.31□□□□□ -2.04
RNU6-28P-201ENST00000362378 HTR1DP28221 377 aa2.31□□□□□ -2.04
RNU6-28P-201ENST00000362378 GFERP55789 205 aa2.31□□□□□ -2.04
RNU6-28P-201ENST00000362378 AP1S2P56377 157 aa2.31□□□□□ -2.04
RNU6-28P-201ENST00000362378 OR2B8PP59922 312 aa2.31□□□□□ -2.04
RNU6-28P-201ENST00000362378 SLAQ13239 276 aa2.31□□□□□ -2.04
RNU6-28P-201ENST00000362378 HNRNPA1L2Q32P51 320 aaKnown RBP2.31□□□□□ -2.04
RNU6-28P-201ENST00000362378 ZNF829Q3KNS6 432 aaPredicted RBP2.31□□□□□ -2.04
RNU6-28P-201ENST00000362378 HSP90AA4PQ58FG1 418 aa2.31□□□□□ -2.04
RNU6-28P-201ENST00000362378 Q5W150 140 aa2.31□□□□□ -2.04
RNU6-28P-201ENST00000362378 WDR86Q86TI4 376 aa2.31□□□□□ -2.04
RNU6-28P-201ENST00000362378 CALHM1Q8IU99 346 aa2.31□□□□□ -2.04
RNU6-28P-201ENST00000362378 NKAIN4Q8IVV8 208 aa2.31□□□□□ -2.04
RNU6-28P-201ENST00000362378 OR10G2Q8NGC3 310 aa2.31□□□□□ -2.04
RNU6-28P-201ENST00000362378 OR51L1Q8NGJ5 315 aa2.31□□□□□ -2.04
RNU6-28P-201ENST00000362378 OR8U1Q8NH10 309 aa2.31□□□□□ -2.04
RNU6-28P-201ENST00000362378 CIDECQ96AQ7 238 aaPredicted RBP2.31□□□□□ -2.04
RNU6-28P-201ENST00000362378 HAUS1Q96CS2 278 aa2.31□□□□□ -2.04
RNU6-28P-201ENST00000362378 RCN3Q96D15 328 aa2.31□□□□□ -2.04
RNU6-28P-201ENST00000362378 LINC00167Q96N53 147 aa2.31□□□□□ -2.04
RNU6-28P-201ENST00000362378 FOPNLQ96NB1 174 aa2.31□□□□□ -2.04
RNU6-28P-201ENST00000362378 SDHCQ99643 169 aaPredicted RBP2.31□□□□□ -2.04
RNU6-28P-201ENST00000362378 TMEM175Q9BSA9 504 aa2.31□□□□□ -2.04
RNU6-28P-201ENST00000362378 GAL3ST2Q9H3Q3 398 aa2.31□□□□□ -2.04
RNU6-28P-201ENST00000362378 KIR3DX1Q9H7L2 352 aa2.31□□□□□ -2.04
RNU6-28P-201ENST00000362378 ZDHHC4Q9NPG8 344 aa2.31□□□□□ -2.04
RNU6-28P-201ENST00000362378 RRAGDQ9NQL2 400 aaPredicted RBP2.31□□□□□ -2.04
RNU6-28P-201ENST00000362378 ZNF355PQ9NSJ1 428 aa2.31□□□□□ -2.04
RNU6-28P-201ENST00000362378 TREX1Q9NSU2 369 aa2.31□□□□□ -2.04
RNU6-28P-201ENST00000362378 UBIAD1Q9Y5Z9 338 aa2.31□□□□□ -2.04
RNU6-28P-201ENST00000362378 TMEM14AQ9Y6G1 99 aa2.31□□□□□ -2.04
RNU6-28P-201ENST00000362378 PRRC2AP48634 2157 aaKnown RBP2.31□□□□□ -2.04
RNU6-28P-201ENST00000362378 TMEM223A0PJW6 202 aa2.3□□□□□ -2.04
RNU6-28P-201ENST00000362378 HACD1B0YJ81 288 aa2.3□□□□□ -2.04
RNU6-28P-201ENST00000362378 BPY2O14599 106 aa2.3□□□□□ -2.04
RNU6-28P-201ENST00000362378 ZNF207O43670 478 aaKnown RBP2.3□□□□□ -2.04
RNU6-28P-201ENST00000362378 RAD1O60671 282 aa2.3□□□□□ -2.04
RNU6-28P-201ENST00000362378 SLC19A2O60779 497 aa2.3□□□□□ -2.04
RNU6-28P-201ENST00000362378 CTNSO60931 367 aa2.3□□□□□ -2.04
RNU6-28P-201ENST00000362378 KRTAP5-8O75690 187 aa2.3□□□□□ -2.04
RNU6-28P-201ENST00000362378 SLC22A5O76082 557 aa2.3□□□□□ -2.04
RNU6-28P-201ENST00000362378 CTDNEP1O95476 244 aa2.3□□□□□ -2.04
RNU6-28P-201ENST00000362378 ETHE1O95571 254 aa2.3□□□□□ -2.04
RNU6-28P-201ENST00000362378 OR8U9P0C7N5 309 aa2.3□□□□□ -2.04
RNU6-28P-201ENST00000362378 CISD3P0C7P0 127 aa2.3□□□□□ -2.04
RNU6-28P-201ENST00000362378 NDUFA8P51970 172 aa2.3□□□□□ -2.04
RNU6-28P-201ENST00000362378 RPL23P62829 140 aaKnown RBP2.3□□□□□ -2.04
RNU6-28P-201ENST00000362378 KDSRQ06136 332 aa2.3□□□□□ -2.04
RNU6-28P-201ENST00000362378 STK38Q15208 465 aa2.3□□□□□ -2.04
RNU6-28P-201ENST00000362378 FAM78AQ5JUQ0 283 aa2.3□□□□□ -2.04
RNU6-28P-201ENST00000362378 MLIPQ5VWP3 458 aa2.3□□□□□ -2.04
RNU6-28P-201ENST00000362378 TIFABQ6ZNK6 161 aa2.3□□□□□ -2.04
RNU6-28P-201ENST00000362378 SLC16A13Q7RTY0 426 aa2.3□□□□□ -2.04
RNU6-28P-201ENST00000362378 RIMKLAQ8IXN7 391 aa2.3□□□□□ -2.04
RNU6-28P-201ENST00000362378 GATSQ8NAP1 163 aa2.3□□□□□ -2.04
RNU6-28P-201ENST00000362378 GPR26Q8NDV2 337 aa2.3□□□□□ -2.04
RNU6-28P-201ENST00000362378 OR6N1Q8NGY5 312 aa2.3□□□□□ -2.04
RNU6-28P-201ENST00000362378 UBALD1Q8TB05 177 aa2.3□□□□□ -2.04
RNU6-28P-201ENST00000362378 TCP10LQ8TDR4 215 aa2.3□□□□□ -2.04
RNU6-28P-201ENST00000362378 ASZ1Q8WWH4 475 aa2.3□□□□□ -2.04
RNU6-28P-201ENST00000362378 BAALCQ8WXS3 180 aa2.3□□□□□ -2.04
RNU6-28P-201ENST00000362378 NARS2Q96I59 477 aaKnown RBP2.3□□□□□ -2.04
RNU6-28P-201ENST00000362378 SCGB3A2Q96PL1 93 aa2.3□□□□□ -2.04
RNU6-28P-201ENST00000362378 TEAD3Q99594 435 aa2.3□□□□□ -2.04
RNU6-28P-201ENST00000362378 TOLLIPQ9H0E2 274 aa2.3□□□□□ -2.04
RNU6-28P-201ENST00000362378 OR52D1Q9H346 318 aa2.3□□□□□ -2.04
RNU6-28P-201ENST00000362378 ZNF442Q9H7R0 627 aa2.3□□□□□ -2.04
RNU6-28P-201ENST00000362378 REEP1Q9H902 201 aa2.3□□□□□ -2.04
RNU6-28P-201ENST00000362378 IFNKQ9P0W0 207 aa2.3□□□□□ -2.04
RNU6-28P-201ENST00000362378 ZMAT5Q9UDW3 170 aaKnown RBP2.3□□□□□ -2.04
RNU6-28P-201ENST00000362378 PSG11Q9UQ72 335 aa2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms