RNA–Protein interactions for RNA: ENST00000358278.7

TPM1-206, Transcript of tropomyosin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TPM1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-206ENST00000358278 TMEM171Q8WVE6 324 aa13.12□□□□□ -0.31
TPM1-206ENST00000358278 PBOV1Q9GZY1 135 aa13.12□□□□□ -0.31
TPM1-206ENST00000358278 OR52A1Q9UKL2 312 aa13.12□□□□□ -0.31
TPM1-206ENST00000358278 FZR1Q9UM11 496 aa13.12□□□□□ -0.31
TPM1-206ENST00000358278 CMAHPQ9Y471 501 aa13.12□□□□□ -0.31
TPM1-206ENST00000358278 ASH1LQ9NR48 2969 aaKnown RBP13.11□□□□□ -0.31
TPM1-206ENST00000358278 ACOD1A6NK06 481 aa13.11□□□□□ -0.31
TPM1-206ENST00000358278 XRCC2O43543 280 aa13.11□□□□□ -0.31
TPM1-206ENST00000358278 MRPS14O60783 128 aaKnown RBP13.11□□□□□ -0.31
TPM1-206ENST00000358278 SRSF10O75494 262 aaKnown RBP13.11□□□□□ -0.31
TPM1-206ENST00000358278 TUBG1P23258 451 aa13.11□□□□□ -0.31
TPM1-206ENST00000358278 ANOS1P23352 680 aa13.11□□□□□ -0.31
TPM1-206ENST00000358278 GCH1P30793 250 aa13.11□□□□□ -0.31
TPM1-206ENST00000358278 FABP6P51161 128 aa13.11□□□□□ -0.31
TPM1-206ENST00000358278 CDH15P55291 814 aa13.11□□□□□ -0.31
TPM1-206ENST00000358278 ZNF718Q3SXZ3 478 aa13.11□□□□□ -0.31
TPM1-206ENST00000358278 GLYATL3Q5SZD4 288 aa13.11□□□□□ -0.31
TPM1-206ENST00000358278 COMMD2Q86X83 199 aa13.11□□□□□ -0.31
TPM1-206ENST00000358278 KLBQ86Z14 1044 aa13.11□□□□□ -0.31
TPM1-206ENST00000358278 DHRS9Q9BPW9 319 aa13.11□□□□□ -0.31
TPM1-206ENST00000358278 POFUT1Q9H488 388 aa13.11□□□□□ -0.31
TPM1-206ENST00000358278 TRIM36Q9NQ86 728 aa13.11□□□□□ -0.31
TPM1-206ENST00000358278 TUBG2Q9NRH3 451 aa13.11□□□□□ -0.31
TPM1-206ENST00000358278 NUFIP1Q9UHK0 495 aaKnown RBP13.11□□□□□ -0.31
TPM1-206ENST00000358278 SELENOVP59797 346 aa13.1□□□□□ -0.31
TPM1-206ENST00000358278 IRF3Q14653 427 aa13.1□□□□□ -0.31
TPM1-206ENST00000358278 HLXQ14774 488 aaPredicted RBP13.1□□□□□ -0.31
TPM1-206ENST00000358278 MED22Q15528 200 aa13.1□□□□□ -0.31
TPM1-206ENST00000358278 MRPL21Q7Z2W9 205 aaKnown RBP13.1□□□□□ -0.31
TPM1-206ENST00000358278 CATSPERDQ86XM0 798 aa13.1□□□□□ -0.31
TPM1-206ENST00000358278 SVOPQ8N4V2 548 aa13.1□□□□□ -0.31
TPM1-206ENST00000358278 OR2G2Q8NGZ5 317 aa13.1□□□□□ -0.31
TPM1-206ENST00000358278 KLF14Q8TD94 323 aaPredicted RBP13.1□□□□□ -0.31
TPM1-206ENST00000358278 MARS2Q96GW9 593 aaKnown RBP13.1□□□□□ -0.31
TPM1-206ENST00000358278 REEP6Q96HR9 211 aa13.1□□□□□ -0.31
TPM1-206ENST00000358278 NR1H4Q96RI1 486 aaPredicted RBP13.1□□□□□ -0.31
TPM1-206ENST00000358278 G6PC2Q9NQR9 355 aa13.1□□□□□ -0.31
TPM1-206ENST00000358278 FAIMQ9NVQ4 179 aa13.1□□□□□ -0.31
TPM1-206ENST00000358278 C5orf63A6NC05 138 aa13.1□□□□□ -0.31
TPM1-206ENST00000358278 H3BSA7 217 aa13.1□□□□□ -0.31
TPM1-206ENST00000358278 OR4A8P0C604 315 aa13.1□□□□□ -0.31
TPM1-206ENST00000358278 APOBEC3AP31941 199 aaPredicted RBP13.1□□□□□ -0.31
TPM1-206ENST00000358278 MAP2K4P45985 399 aa13.1□□□□□ -0.31
TPM1-206ENST00000358278 KLF3P57682 345 aaPredicted RBP13.1□□□□□ -0.31
TPM1-206ENST00000358278 GK2Q14410 553 aaPredicted RBP13.1□□□□□ -0.31
TPM1-206ENST00000358278 TBCEQ15813 527 aaPredicted RBP13.1□□□□□ -0.31
TPM1-206ENST00000358278 ADIPOQQ15848 244 aa13.1□□□□□ -0.31
TPM1-206ENST00000358278 ODF4Q2M2E3 257 aa13.1□□□□□ -0.31
TPM1-206ENST00000358278 WDR38Q5JTN6 314 aa13.1□□□□□ -0.31
TPM1-206ENST00000358278 ZNF773Q6PK81 442 aa13.1□□□□□ -0.31
TPM1-206ENST00000358278 PGAP1Q75T13 922 aa13.1□□□□□ -0.31
TPM1-206ENST00000358278 FBXL14Q8N1E6 418 aa13.1□□□□□ -0.31
TPM1-206ENST00000358278 SYNPRQ8TBG9 265 aa13.1□□□□□ -0.31
TPM1-206ENST00000358278 PLK3Q9H4B4 646 aa13.1□□□□□ -0.31
TPM1-206ENST00000358278 OPA3Q9H6K4 179 aa13.1□□□□□ -0.31
TPM1-206ENST00000358278 BABAM2Q9NXR7 383 aa13.1□□□□□ -0.31
TPM1-206ENST00000358278 ZNF319Q9P2F9 582 aa13.1□□□□□ -0.31
TPM1-206ENST00000358278 DUSP13Q9UII6 198 aa13.1□□□□□ -0.31
TPM1-206ENST00000358278 SLC22A13Q9Y226 551 aa13.1□□□□□ -0.31
TPM1-206ENST00000358278 ITPR2Q14571 2701 aa13.1□□□□□ -0.31
TPM1-206ENST00000358278 CHD3Q12873 2000 aaKnown RBP13.09□□□□□ -0.31
TPM1-206ENST00000358278 A0A0U1RQV5 110 aa13.09□□□□□ -0.31
TPM1-206ENST00000358278 E9PI62 339 aa13.09□□□□□ -0.31
TPM1-206ENST00000358278 TTRP02766 147 aa13.09□□□□□ -0.31
TPM1-206ENST00000358278 CFL1P23528 166 aaKnown RBP13.09□□□□□ -0.31
TPM1-206ENST00000358278 SERPINF1P36955 418 aa13.09□□□□□ -0.31
TPM1-206ENST00000358278 GTF2A1P52655 376 aaPredicted RBP13.09□□□□□ -0.31
TPM1-206ENST00000358278 TAS2R43P59537 309 aa13.09□□□□□ -0.31
TPM1-206ENST00000358278 ZNF92Q03936 586 aa13.09□□□□□ -0.31
TPM1-206ENST00000358278 ALKBH1Q13686 389 aaKnown RBP13.09□□□□□ -0.31
TPM1-206ENST00000358278 SPHARQ15513 63 aa13.09□□□□□ -0.31
TPM1-206ENST00000358278 FDX2Q6P4F2 183 aa13.09□□□□□ -0.31
TPM1-206ENST00000358278 MUC15Q8N387 334 aa13.09□□□□□ -0.31
TPM1-206ENST00000358278 PRSS35Q8N3Z0 413 aa13.09□□□□□ -0.31
TPM1-206ENST00000358278 ZNF485Q8NCK3 441 aa13.09□□□□□ -0.31
TPM1-206ENST00000358278 OR51E1Q8TCB6 317 aa13.09□□□□□ -0.31
TPM1-206ENST00000358278 PPP1R14AQ96A00 147 aa13.09□□□□□ -0.31
TPM1-206ENST00000358278 MRPL24Q96A35 216 aaKnown RBP13.09□□□□□ -0.31
TPM1-206ENST00000358278 OR5M11Q96RB7 305 aa13.09□□□□□ -0.31
TPM1-206ENST00000358278 SYT3Q9BQG1 590 aa13.09□□□□□ -0.31
TPM1-206ENST00000358278 RGCCQ9H4X1 137 aa13.09□□□□□ -0.31
TPM1-206ENST00000358278 ZNF391Q9UJN7 358 aa13.09□□□□□ -0.31
TPM1-206ENST00000358278 FLNBO75369 2602 aaKnown RBP13.09□□□□□ -0.31
TPM1-206ENST00000358278 POLQO75417 2590 aa13.09□□□□□ -0.31
TPM1-206ENST00000358278 TRBV2A0A0J9YWF9 115 aa13.08□□□□□ -0.32
TPM1-206ENST00000358278 TRIM64A6NGJ6 449 aa13.08□□□□□ -0.32
TPM1-206ENST00000358278 UBCP0CG48 685 aaKnown RBP13.08□□□□□ -0.32
TPM1-206ENST00000358278 RAC2P15153 192 aa13.08□□□□□ -0.32
TPM1-206ENST00000358278 ZNF250P15622 560 aa13.08□□□□□ -0.32
TPM1-206ENST00000358278 TTKP33981 857 aa13.08□□□□□ -0.32
TPM1-206ENST00000358278 MPV17P39210 176 aa13.08□□□□□ -0.32
TPM1-206ENST00000358278 KIR3DL2P43630 455 aa13.08□□□□□ -0.32
TPM1-206ENST00000358278 TGM4P49221 684 aa13.08□□□□□ -0.32
TPM1-206ENST00000358278 PRSS12P56730 875 aa13.08□□□□□ -0.32
TPM1-206ENST00000358278 NANOS3P60323 173 aaKnown RBP13.08□□□□□ -0.32
TPM1-206ENST00000358278 MSMPQ1L6U9 139 aa13.08□□□□□ -0.32
TPM1-206ENST00000358278 CCDC58Q4VC31 144 aa13.08□□□□□ -0.32
TPM1-206ENST00000358278 MBNL2Q5VZF2 373 aaKnown RBP13.08□□□□□ -0.32
TPM1-206ENST00000358278 XAF1Q6GPH4 301 aa13.08□□□□□ -0.32
TPM1-206ENST00000358278 RPL22L1Q6P5R6 122 aaKnown RBP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms