RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 GDE1Q9NZC3 331 aa11.54□□□□□ -0.56
SYNCRIP-201ENST00000355238 ZNF891A8MT65 544 aaPredicted RBP11.54□□□□□ -0.56
SYNCRIP-201ENST00000355238 MPC2O95563 127 aa11.54□□□□□ -0.56
SYNCRIP-201ENST00000355238 SLC25A4P12235 298 aa11.54□□□□□ -0.56
SYNCRIP-201ENST00000355238 THEM4Q5T1C6 240 aa11.54□□□□□ -0.56
SYNCRIP-201ENST00000355238 FIGNL2A6NMB9 653 aa11.53□□□□□ -0.56
SYNCRIP-201ENST00000355238 TMPRSS11DO60235 418 aa11.53□□□□□ -0.56
SYNCRIP-201ENST00000355238 BMPR1AP36894 532 aa11.53□□□□□ -0.56
SYNCRIP-201ENST00000355238 RPL18Q07020 188 aaKnown RBP11.53□□□□□ -0.56
SYNCRIP-201ENST00000355238 OR4S1Q8NGB4 309 aa11.53□□□□□ -0.56
SYNCRIP-201ENST00000355238 OR51F2Q8NH61 342 aa11.53□□□□□ -0.56
SYNCRIP-201ENST00000355238 ARRDC3Q96B67 414 aa11.53□□□□□ -0.56
SYNCRIP-201ENST00000355238 APH1AQ96BI3 265 aa11.53□□□□□ -0.56
SYNCRIP-201ENST00000355238 IL20Q9NYY1 176 aa11.53□□□□□ -0.56
SYNCRIP-201ENST00000355238 LRIT1Q9P2V4 623 aa11.53□□□□□ -0.56
SYNCRIP-201ENST00000355238 PRSS37A4D1T9 235 aa11.53□□□□□ -0.56
SYNCRIP-201ENST00000355238 RPL13AP40429 203 aaKnown RBP11.53□□□□□ -0.56
SYNCRIP-201ENST00000355238 PKIAP61925 76 aa11.53□□□□□ -0.56
SYNCRIP-201ENST00000355238 CEBPEQ15744 281 aa11.53□□□□□ -0.56
SYNCRIP-201ENST00000355238 DEFB133Q30KQ1 61 aa11.53□□□□□ -0.56
SYNCRIP-201ENST00000355238 TMEM52BQ4KMG9 183 aa11.53□□□□□ -0.56
SYNCRIP-201ENST00000355238 ZNF813Q6ZN06 617 aa11.53□□□□□ -0.56
SYNCRIP-201ENST00000355238 GOT1L1Q8NHS2 421 aaPredicted RBP11.53□□□□□ -0.56
SYNCRIP-201ENST00000355238 M1APQ8TC57 530 aa11.53□□□□□ -0.56
SYNCRIP-201ENST00000355238 TAAR9Q96RI9 348 aa11.53□□□□□ -0.56
SYNCRIP-201ENST00000355238 HDAC8Q9BY41 377 aa11.53□□□□□ -0.56
SYNCRIP-201ENST00000355238 PLEKHB1Q9UF11 243 aaPredicted RBP11.53□□□□□ -0.56
SYNCRIP-201ENST00000355238 PISDQ9UG56 409 aa11.53□□□□□ -0.56
SYNCRIP-201ENST00000355238 RAC1P63000 192 aa11.53□□□□□ -0.56
SYNCRIP-201ENST00000355238 TMEM241Q24JQ0 296 aa11.53□□□□□ -0.56
SYNCRIP-201ENST00000355238 PLPP6Q8IY26 295 aa11.53□□□□□ -0.56
SYNCRIP-201ENST00000355238 C19orf43Q9BQ61 176 aa11.53□□□□□ -0.56
SYNCRIP-201ENST00000355238 NUDT9Q9BW91 350 aa11.53□□□□□ -0.56
SYNCRIP-201ENST00000355238 GPR84Q9NQS5 396 aa11.53□□□□□ -0.56
SYNCRIP-201ENST00000355238 SLC22A13Q9Y226 551 aa11.53□□□□□ -0.56
SYNCRIP-201ENST00000355238 EXOGQ9Y2C4 368 aaKnown RBP11.53□□□□□ -0.56
SYNCRIP-201ENST00000355238 V9GYH0 126 aa11.53□□□□□ -0.56
SYNCRIP-201ENST00000355238 OR5K3A6NET4 321 aa11.53□□□□□ -0.56
SYNCRIP-201ENST00000355238 CTDSPLO15194 276 aa11.53□□□□□ -0.56
SYNCRIP-201ENST00000355238 TIMM8AO60220 97 aaPredicted RBP11.53□□□□□ -0.56
SYNCRIP-201ENST00000355238 OPN1MWP04001 364 aa11.53□□□□□ -0.56
SYNCRIP-201ENST00000355238 OPN1MW2P0DN77 364 aa11.53□□□□□ -0.56
SYNCRIP-201ENST00000355238 OPN1MW3P0DN78 364 aa11.53□□□□□ -0.56
SYNCRIP-201ENST00000355238 SLC25A6P12236 298 aa11.53□□□□□ -0.56
SYNCRIP-201ENST00000355238 EEF1A2Q05639 463 aaKnown RBP11.53□□□□□ -0.56
SYNCRIP-201ENST00000355238 PNRC1Q12796 327 aaPredicted RBP11.53□□□□□ -0.56
SYNCRIP-201ENST00000355238 CDONQ4KMG0 1287 aa11.53□□□□□ -0.56
SYNCRIP-201ENST00000355238 PRSS54Q6PEW0 395 aa11.53□□□□□ -0.56
SYNCRIP-201ENST00000355238 NPAS1Q99742 590 aa11.53□□□□□ -0.56
SYNCRIP-201ENST00000355238 CEBPBP17676 345 aa11.53□□□□□ -0.56
SYNCRIP-201ENST00000355238 VWA2Q5GFL6 755 aa11.53□□□□□ -0.56
SYNCRIP-201ENST00000355238 C9orf135Q5VTT2 229 aa11.53□□□□□ -0.56
SYNCRIP-201ENST00000355238 METRNLQ641Q3 311 aa11.53□□□□□ -0.56
SYNCRIP-201ENST00000355238 MAML2Q8IZL2 1156 aaPredicted RBP11.53□□□□□ -0.56
SYNCRIP-201ENST00000355238 FAM174AQ8TBP5 190 aa11.53□□□□□ -0.56
SYNCRIP-201ENST00000355238 HCFC1R1Q9NWW0 138 aa11.53□□□□□ -0.56
SYNCRIP-201ENST00000355238 A4GNTQ9UNA3 340 aa11.53□□□□□ -0.56
SYNCRIP-201ENST00000355238 AQP7O14520 342 aa11.52□□□□□ -0.56
SYNCRIP-201ENST00000355238 SFT2D2O95562 160 aa11.52□□□□□ -0.56
SYNCRIP-201ENST00000355238 IAPPP10997 89 aa11.52□□□□□ -0.56
SYNCRIP-201ENST00000355238 PMCHP20382 165 aa11.52□□□□□ -0.56
SYNCRIP-201ENST00000355238 ABCD3P28288 659 aa11.52□□□□□ -0.56
SYNCRIP-201ENST00000355238 CD200P41217 278 aa11.52□□□□□ -0.56
SYNCRIP-201ENST00000355238 CASP6P55212 293 aa11.52□□□□□ -0.56
SYNCRIP-201ENST00000355238 C9orf152Q5JTZ5 239 aa11.52□□□□□ -0.56
SYNCRIP-201ENST00000355238 HLA-CQ95604 372 aa11.52□□□□□ -0.56
SYNCRIP-201ENST00000355238 NXPE3Q969Y0 559 aa11.52□□□□□ -0.56
SYNCRIP-201ENST00000355238 PBOV1Q9GZY1 135 aa11.52□□□□□ -0.56
SYNCRIP-201ENST00000355238 SHARPINQ9H0F6 387 aa11.52□□□□□ -0.56
SYNCRIP-201ENST00000355238 A0A1W2PPH5 198 aa11.52□□□□□ -0.57
SYNCRIP-201ENST00000355238 GSTZ1O43708 216 aaPredicted RBP11.52□□□□□ -0.57
SYNCRIP-201ENST00000355238 SULT1A3P0DMM9 295 aa11.52□□□□□ -0.57
SYNCRIP-201ENST00000355238 SULT1A4P0DMN0 295 aa11.52□□□□□ -0.57
SYNCRIP-201ENST00000355238 CYBAP13498 195 aa11.52□□□□□ -0.57
SYNCRIP-201ENST00000355238 OPRM1P35372 400 aa11.52□□□□□ -0.57
SYNCRIP-201ENST00000355238 PLA1AQ53H76 456 aa11.52□□□□□ -0.57
SYNCRIP-201ENST00000355238 CYHR1Q6ZMK1 362 aa11.52□□□□□ -0.57
SYNCRIP-201ENST00000355238 TAS1R1Q7RTX1 841 aa11.52□□□□□ -0.57
SYNCRIP-201ENST00000355238 ARSGQ96EG1 525 aa11.52□□□□□ -0.57
SYNCRIP-201ENST00000355238 USB1Q9BQ65 265 aaKnown RBP11.52□□□□□ -0.57
SYNCRIP-201ENST00000355238 ANKRD20A5PA0PJZ0 165 aa11.52□□□□□ -0.57
SYNCRIP-201ENST00000355238 EN2P19622 333 aaPredicted RBP11.52□□□□□ -0.57
SYNCRIP-201ENST00000355238 PRTGQ2VWP7 1150 aa11.52□□□□□ -0.57
SYNCRIP-201ENST00000355238 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.52□□□□□ -0.57
SYNCRIP-201ENST00000355238 LAT2Q9GZY6 243 aa11.52□□□□□ -0.57
SYNCRIP-201ENST00000355238 MAGT1Q9H0U3 335 aa11.52□□□□□ -0.57
SYNCRIP-201ENST00000355238 RIMS4Q9H426 269 aaPredicted RBP11.52□□□□□ -0.57
SYNCRIP-201ENST00000355238 LPAR3Q9UBY5 353 aa11.52□□□□□ -0.57
SYNCRIP-201ENST00000355238 C9orf170A2RU37 121 aa11.52□□□□□ -0.57
SYNCRIP-201ENST00000355238 SOCS7O14512 581 aa11.52□□□□□ -0.57
SYNCRIP-201ENST00000355238 FCMRO60667 390 aa11.52□□□□□ -0.57
SYNCRIP-201ENST00000355238 SLCO1C1Q9NYB5 712 aa11.52□□□□□ -0.57
SYNCRIP-201ENST00000355238 FAM166BA8MTA8 275 aa11.52□□□□□ -0.57
SYNCRIP-201ENST00000355238 KLKB1P03952 638 aa11.52□□□□□ -0.57
SYNCRIP-201ENST00000355238 ASTLQ6HA08 431 aaPredicted RBP11.52□□□□□ -0.57
SYNCRIP-201ENST00000355238 DGAT2L6Q6ZPD8 337 aa11.52□□□□□ -0.57
SYNCRIP-201ENST00000355238 NOL4LQ96MY1 436 aaPredicted RBP11.52□□□□□ -0.57
SYNCRIP-201ENST00000355238 RSRP1Q9BUV0 290 aa11.52□□□□□ -0.57
SYNCRIP-201ENST00000355238 TMED3Q9Y3Q3 217 aa11.52□□□□□ -0.57
SYNCRIP-201ENST00000355238 IL3RAP26951 378 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms