RNA–Protein interactions for RNA: ENST00000353411.10

SKP1-202, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SKP1, Length 9,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-202ENST00000353411 PRKRAO75569 313 aaKnown RBP4.59□□□□□ -1.67
SKP1-202ENST00000353411 FCARP24071 287 aa4.59□□□□□ -1.67
SKP1-202ENST00000353411 SYPL1Q16563 259 aa4.59□□□□□ -1.67
SKP1-202ENST00000353411 CTSL3PQ5NE16 218 aa4.59□□□□□ -1.67
SKP1-202ENST00000353411 COX20Q5RI15 118 aa4.59□□□□□ -1.67
SKP1-202ENST00000353411 YOD1Q5VVQ6 348 aaPredicted RBP4.59□□□□□ -1.67
SKP1-202ENST00000353411 NKAIN4Q8IVV8 208 aa4.59□□□□□ -1.67
SKP1-202ENST00000353411 MAML2Q8IZL2 1156 aaPredicted RBP4.59□□□□□ -1.67
SKP1-202ENST00000353411 GCNT2Q8N0V5 402 aa4.59□□□□□ -1.67
SKP1-202ENST00000353411 OR4N2Q8NGD1 307 aa4.59□□□□□ -1.67
SKP1-202ENST00000353411 SCAMP5Q8TAC9 235 aa4.59□□□□□ -1.67
SKP1-202ENST00000353411 HMGCLL1Q8TB92 370 aa4.59□□□□□ -1.67
SKP1-202ENST00000353411 ZNF689Q96CS4 500 aaPredicted RBP4.59□□□□□ -1.67
SKP1-202ENST00000353411 C14orf144Q96I85 54 aa4.59□□□□□ -1.67
SKP1-202ENST00000353411 CHRDL1Q9BU40 450 aa4.59□□□□□ -1.67
SKP1-202ENST00000353411 CA10Q9NS85 328 aa4.59□□□□□ -1.67
SKP1-202ENST00000353411 CYB5R3P00387 301 aaPredicted RBP4.59□□□□□ -1.68
SKP1-202ENST00000353411 NRASP01111 189 aa4.59□□□□□ -1.68
SKP1-202ENST00000353411 HRASP01112 189 aa4.59□□□□□ -1.68
SKP1-202ENST00000353411 KRASP01116 189 aa4.59□□□□□ -1.68
SKP1-202ENST00000353411 RCC1P18754 421 aaPredicted RBP4.59□□□□□ -1.68
SKP1-202ENST00000353411 MPGP29372 298 aa4.59□□□□□ -1.68
SKP1-202ENST00000353411 CXCL9Q07325 125 aa4.59□□□□□ -1.68
SKP1-202ENST00000353411 PNLIPRP3Q17RR3 467 aa4.59□□□□□ -1.68
SKP1-202ENST00000353411 TMEM217Q8N7C4 229 aa4.59□□□□□ -1.68
SKP1-202ENST00000353411 RPUSD4Q96CM3 377 aaKnown RBP4.59□□□□□ -1.68
SKP1-202ENST00000353411 TMEM169Q96HH4 297 aa4.59□□□□□ -1.68
SKP1-202ENST00000353411 ALG12Q9BV10 488 aa4.59□□□□□ -1.68
SKP1-202ENST00000353411 CRISPLD2Q9H0B8 497 aa4.59□□□□□ -1.68
SKP1-202ENST00000353411 PLEKHF2Q9H8W4 249 aa4.59□□□□□ -1.68
SKP1-202ENST00000353411 CHST11Q9NPF2 352 aa4.59□□□□□ -1.68
SKP1-202ENST00000353411 NECAP2Q9NVZ3 263 aa4.59□□□□□ -1.68
SKP1-202ENST00000353411 KCND3Q9UK17 655 aa4.59□□□□□ -1.68
SKP1-202ENST00000353411 SLX4Q8IY92 1834 aa4.59□□□□□ -1.68
SKP1-202ENST00000353411 MAST2Q6P0Q8 1798 aa4.59□□□□□ -1.68
SKP1-202ENST00000353411 HRH1P35367 487 aa4.59□□□□□ -1.68
SKP1-202ENST00000353411 PDLIM3Q53GG5 364 aaPredicted RBP4.59□□□□□ -1.68
SKP1-202ENST00000353411 ATRAIDQ6UW56 229 aa4.59□□□□□ -1.68
SKP1-202ENST00000353411 DPY19L2P2Q6ZN68 376 aa4.59□□□□□ -1.68
SKP1-202ENST00000353411 BCL2L2Q92843 193 aaPredicted RBP4.59□□□□□ -1.68
SKP1-202ENST00000353411 SEH1LQ96EE3 360 aa4.59□□□□□ -1.68
SKP1-202ENST00000353411 P2RY12Q9H244 342 aa4.59□□□□□ -1.68
SKP1-202ENST00000353411 LHX3Q9UBR4 397 aa4.59□□□□□ -1.68
SKP1-202ENST00000353411 RGPD2P0DJD1 1756 aa4.59□□□□□ -1.68
SKP1-202ENST00000353411 NPIPA5A0A0B4J1W7 369 aa4.58□□□□□ -1.68
SKP1-202ENST00000353411 MBPP02686 304 aaPredicted RBP4.58□□□□□ -1.68
SKP1-202ENST00000353411 GAPDHP04406 335 aaKnown RBP4.58□□□□□ -1.68
SKP1-202ENST00000353411 C8orf89P0DMQ9 161 aa4.58□□□□□ -1.68
SKP1-202ENST00000353411 CRISP2P16562 243 aa4.58□□□□□ -1.68
SKP1-202ENST00000353411 NOVP48745 357 aa4.58□□□□□ -1.68
SKP1-202ENST00000353411 MVDP53602 400 aa4.58□□□□□ -1.68
SKP1-202ENST00000353411 OR1Q1Q15612 314 aa4.58□□□□□ -1.68
SKP1-202ENST00000353411 PMCHL1Q16048 86 aa4.58□□□□□ -1.68
SKP1-202ENST00000353411 HYAL4Q2M3T9 481 aa4.58□□□□□ -1.68
SKP1-202ENST00000353411 PRRT3Q5FWE3 981 aa4.58□□□□□ -1.68
SKP1-202ENST00000353411 WDR74Q6RFH5 385 aaPredicted RBP4.58□□□□□ -1.68
SKP1-202ENST00000353411 SLC24A5Q71RS6 500 aa4.58□□□□□ -1.68
SKP1-202ENST00000353411 CBARPQ8N350 705 aaPredicted RBP4.58□□□□□ -1.68
SKP1-202ENST00000353411 LHX4Q969G2 390 aa4.58□□□□□ -1.68
SKP1-202ENST00000353411 JSRP1Q96MG2 331 aaPredicted RBP4.58□□□□□ -1.68
SKP1-202ENST00000353411 DERL3Q96Q80 235 aa4.58□□□□□ -1.68
SKP1-202ENST00000353411 SMOQ99835 787 aa4.58□□□□□ -1.68
SKP1-202ENST00000353411 ELOVL3Q9HB03 270 aa4.58□□□□□ -1.68
SKP1-202ENST00000353411 TRAV27A0A087WT01 109 aa4.58□□□□□ -1.68
SKP1-202ENST00000353411 GLOD5A6NK44 160 aa4.58□□□□□ -1.68
SKP1-202ENST00000353411 BSGP35613 385 aa4.58□□□□□ -1.68
SKP1-202ENST00000353411 FAM3AP98173 230 aa4.58□□□□□ -1.68
SKP1-202ENST00000353411 SLC22A6Q4U2R8 563 aa4.58□□□□□ -1.68
SKP1-202ENST00000353411 FAM129CQ86XR2 697 aa4.58□□□□□ -1.68
SKP1-202ENST00000353411 PRSS58Q8IYP2 241 aa4.58□□□□□ -1.68
SKP1-202ENST00000353411 OR5AR1Q8NGP9 310 aa4.58□□□□□ -1.68
SKP1-202ENST00000353411 BORCS8Q96FH0 119 aa4.58□□□□□ -1.68
SKP1-202ENST00000353411 OR5B2Q96R09 309 aa4.58□□□□□ -1.68
SKP1-202ENST00000353411 SFXN1Q9H9B4 322 aa4.58□□□□□ -1.68
SKP1-202ENST00000353411 ISG20L2Q9H9L3 353 aaKnown RBP4.58□□□□□ -1.68
SKP1-202ENST00000353411 LRIT1Q9P2V4 623 aa4.58□□□□□ -1.68
SKP1-202ENST00000353411 USP3Q9Y6I4 520 aa4.58□□□□□ -1.68
SKP1-202ENST00000353411 GOSR1O95249 250 aa4.58□□□□□ -1.68
SKP1-202ENST00000353411 FUT1P19526 365 aa4.58□□□□□ -1.68
SKP1-202ENST00000353411 PDX1P52945 283 aa4.58□□□□□ -1.68
SKP1-202ENST00000353411 GAGE1Q13065 139 aa4.58□□□□□ -1.68
SKP1-202ENST00000353411 TMEM207Q6UWW9 146 aa4.58□□□□□ -1.68
SKP1-202ENST00000353411 NIT1Q86X76 327 aa4.58□□□□□ -1.68
SKP1-202ENST00000353411 TP53INP2Q8IXH6 220 aa4.58□□□□□ -1.68
SKP1-202ENST00000353411 PNPLA1Q8N8W4 532 aa4.58□□□□□ -1.68
SKP1-202ENST00000353411 VN1R17PQ8TDU5 208 aa4.58□□□□□ -1.68
SKP1-202ENST00000353411 PHPT1Q9NRX4 125 aaPredicted RBP4.58□□□□□ -1.68
SKP1-202ENST00000353411 TBX21Q9UL17 535 aa4.58□□□□□ -1.68
SKP1-202ENST00000353411 STARD10Q9Y365 291 aa4.58□□□□□ -1.68
SKP1-202ENST00000353411 RHBDD3Q9Y3P4 386 aa4.58□□□□□ -1.68
SKP1-202ENST00000353411 WIPI2Q9Y4P8 454 aa4.58□□□□□ -1.68
SKP1-202ENST00000353411 PRAMEF27A3QJZ7 478 aa4.58□□□□□ -1.68
SKP1-202ENST00000353411 PRAMEF25A6NGN4 478 aa4.58□□□□□ -1.68
SKP1-202ENST00000353411 PRAMEF4O60810 478 aa4.58□□□□□ -1.68
SKP1-202ENST00000353411 GLCEO94923 617 aa4.58□□□□□ -1.68
SKP1-202ENST00000353411 PRNPP04156 253 aa4.58□□□□□ -1.68
SKP1-202ENST00000353411 LIMS3P0CW19 117 aa4.58□□□□□ -1.68
SKP1-202ENST00000353411 LIMS4P0CW20 117 aa4.58□□□□□ -1.68
SKP1-202ENST00000353411 AOAHP28039 575 aa4.58□□□□□ -1.68
SKP1-202ENST00000353411 SRP14P37108 136 aaKnown RBP4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms