RNA–Protein interactions for RNA: ENST00000343483.6

HOXA9-201, Transcript of homeobox A9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA9, Length 2,060 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-201ENST00000343483 INTS12Q96CB8 462 aaKnown RBP16.4■□□□□ 0.22
HOXA9-201ENST00000343483 ZNF837Q96EG3 531 aaPredicted RBP16.4■□□□□ 0.22
HOXA9-201ENST00000343483 ZNF845Q96IR2 970 aaPredicted RBP16.4■□□□□ 0.22
HOXA9-201ENST00000343483 MOB1AQ9H8S9 216 aa16.4■□□□□ 0.22
HOXA9-201ENST00000343483 EMC3Q9P0I2 261 aa16.4■□□□□ 0.22
HOXA9-201ENST00000343483 ARGFXA6NJG6 315 aa16.39■□□□□ 0.21
HOXA9-201ENST00000343483 ARPC1BO15143 372 aaKnown RBP16.39■□□□□ 0.21
HOXA9-201ENST00000343483 SULT1A3P0DMM9 295 aa16.39■□□□□ 0.21
HOXA9-201ENST00000343483 SULT1A4P0DMN0 295 aa16.39■□□□□ 0.21
HOXA9-201ENST00000343483 ENDOGQ14249 297 aaKnown RBP16.39■□□□□ 0.21
HOXA9-201ENST00000343483 DNM1P46Q6ZS02 220 aa16.39■□□□□ 0.21
HOXA9-201ENST00000343483 GALNT16Q8N428 558 aa16.39■□□□□ 0.21
HOXA9-201ENST00000343483 C9orf62Q8N4C0 152 aa16.39■□□□□ 0.21
HOXA9-201ENST00000343483 JAGN1Q8N5M9 183 aa16.39■□□□□ 0.21
HOXA9-201ENST00000343483 ZNF283Q8N7M2 679 aa16.39■□□□□ 0.21
HOXA9-201ENST00000343483 NABP1Q96AH0 204 aa16.39■□□□□ 0.21
HOXA9-201ENST00000343483 TTTY12Q9BZ98 90 aa16.39■□□□□ 0.21
HOXA9-201ENST00000343483 RANBP3Q9H6Z4 567 aaPredicted RBP16.39■□□□□ 0.21
HOXA9-201ENST00000343483 A0A1B0GVI7 797 aa16.39■□□□□ 0.21
HOXA9-201ENST00000343483 MED19A0JLT2 244 aaPredicted RBP16.39■□□□□ 0.21
HOXA9-201ENST00000343483 PRAF2O60831 178 aa16.39■□□□□ 0.21
HOXA9-201ENST00000343483 RBBP9O75884 186 aa16.39■□□□□ 0.21
HOXA9-201ENST00000343483 HPXP02790 462 aa16.39■□□□□ 0.21
HOXA9-201ENST00000343483 HTR2CP28335 458 aa16.39■□□□□ 0.21
HOXA9-201ENST00000343483 NTF4P34130 210 aa16.39■□□□□ 0.21
HOXA9-201ENST00000343483 MAGEA5P43359 124 aa16.39■□□□□ 0.21
HOXA9-201ENST00000343483 GRB2P62993 217 aaKnown RBP16.39■□□□□ 0.21
HOXA9-201ENST00000343483 PLGLB1Q02325 96 aa16.39■□□□□ 0.21
HOXA9-201ENST00000343483 SRYQ05066 204 aa16.39■□□□□ 0.21
HOXA9-201ENST00000343483 ABLIM2Q6H8Q1 611 aa16.39■□□□□ 0.21
HOXA9-201ENST00000343483 ABHD12BQ7Z5M8 362 aaPredicted RBP16.39■□□□□ 0.21
HOXA9-201ENST00000343483 DTX1Q86Y01 620 aa16.39■□□□□ 0.21
HOXA9-201ENST00000343483 OR8B12Q8NGG6 310 aa16.39■□□□□ 0.21
HOXA9-201ENST00000343483 CPNE4Q96A23 557 aaPredicted RBP16.39■□□□□ 0.21
HOXA9-201ENST00000343483 SLC5A6Q9Y289 635 aa16.39■□□□□ 0.21
HOXA9-201ENST00000343483 MEGF11A6BM72 1044 aa16.38■□□□□ 0.21
HOXA9-201ENST00000343483 ALDOBP05062 364 aa16.38■□□□□ 0.21
HOXA9-201ENST00000343483 GFOD2Q3B7J2 385 aa16.38■□□□□ 0.21
HOXA9-201ENST00000343483 LINC00303Q3SY05 128 aa16.38■□□□□ 0.21
HOXA9-201ENST00000343483 FAM166AQ6J272 317 aa16.38■□□□□ 0.21
HOXA9-201ENST00000343483 FOXL2NBQ6ZUU3 175 aa16.38■□□□□ 0.21
HOXA9-201ENST00000343483 AAED1Q7RTV5 226 aa16.38■□□□□ 0.21
HOXA9-201ENST00000343483 GJC3Q8NFK1 279 aa16.38■□□□□ 0.21
HOXA9-201ENST00000343483 ZNF431Q8TF32 576 aaPredicted RBP16.38■□□□□ 0.21
HOXA9-201ENST00000343483 ABHD3Q8WU67 409 aa16.38■□□□□ 0.21
HOXA9-201ENST00000343483 ADAT3Q96EY9 351 aaPredicted RBP16.38■□□□□ 0.21
HOXA9-201ENST00000343483 NOX3Q9HBY0 568 aa16.38■□□□□ 0.21
HOXA9-201ENST00000343483 MGAT4AQ9UM21 535 aa16.38■□□□□ 0.21
HOXA9-201ENST00000343483 TRAV18A0A075B6X5 111 aa16.38■□□□□ 0.21
HOXA9-201ENST00000343483 MEIKINA0A087WXM9 373 aa16.38■□□□□ 0.21
HOXA9-201ENST00000343483 TMEM272A0A1B0GTI8 110 aa16.38■□□□□ 0.21
HOXA9-201ENST00000343483 H7C417 338 aa16.38■□□□□ 0.21
HOXA9-201ENST00000343483 LINC01387J3KSC0 135 aa16.38■□□□□ 0.21
HOXA9-201ENST00000343483 KDM4BO94953 1096 aa16.38■□□□□ 0.21
HOXA9-201ENST00000343483 TGM6O95932 706 aa16.38■□□□□ 0.21
HOXA9-201ENST00000343483 HPNP05981 417 aa16.38■□□□□ 0.21
HOXA9-201ENST00000343483 CD82P27701 267 aa16.38■□□□□ 0.21
HOXA9-201ENST00000343483 PCGF3Q3KNV8 242 aa16.38■□□□□ 0.21
HOXA9-201ENST00000343483 PDSS1Q5T2R2 415 aa16.38■□□□□ 0.21
HOXA9-201ENST00000343483 C6orf183Q5T699 404 aa16.38■□□□□ 0.21
HOXA9-201ENST00000343483 FAM57BQ71RH2 274 aa16.38■□□□□ 0.21
HOXA9-201ENST00000343483 GALNTL5Q7Z4T8 443 aa16.38■□□□□ 0.21
HOXA9-201ENST00000343483 BIVMQ86UB2 503 aa16.38■□□□□ 0.21
HOXA9-201ENST00000343483 VASH2Q86V25 355 aa16.38■□□□□ 0.21
HOXA9-201ENST00000343483 OR1J2Q8NGS2 313 aa16.38■□□□□ 0.21
HOXA9-201ENST00000343483 ALKBH3Q96Q83 286 aaPredicted RBP16.38■□□□□ 0.21
HOXA9-201ENST00000343483 ATG5Q9H1Y0 275 aa16.38■□□□□ 0.21
HOXA9-201ENST00000343483 CRLF2Q9HC73 371 aa16.38■□□□□ 0.21
HOXA9-201ENST00000343483 SLC17A5Q9NRA2 495 aa16.38■□□□□ 0.21
HOXA9-201ENST00000343483 MTFP1Q9UDX5 166 aa16.38■□□□□ 0.21
HOXA9-201ENST00000343483 A0A1B0GUH1 482 aa16.37■□□□□ 0.21
HOXA9-201ENST00000343483 CIB4A0PJX0 185 aa16.37■□□□□ 0.21
HOXA9-201ENST00000343483 OR5H15A6NDH6 313 aa16.37■□□□□ 0.21
HOXA9-201ENST00000343483 CDRT15L2A8MXV6 281 aa16.37■□□□□ 0.21
HOXA9-201ENST00000343483 ANOS1P23352 680 aa16.37■□□□□ 0.21
HOXA9-201ENST00000343483 METTL11BQ5VVY1 283 aa16.37■□□□□ 0.21
HOXA9-201ENST00000343483 SLC25A25Q6KCM7 469 aa16.37■□□□□ 0.21
HOXA9-201ENST00000343483 NKAIN3Q8N8D7 197 aa16.37■□□□□ 0.21
HOXA9-201ENST00000343483 OR6M1Q8NGM8 313 aa16.37■□□□□ 0.21
HOXA9-201ENST00000343483 SLC25A28Q96A46 364 aa16.37■□□□□ 0.21
HOXA9-201ENST00000343483 SLC6A15Q9H2J7 730 aa16.37■□□□□ 0.21
HOXA9-201ENST00000343483 ZNF319Q9P2F9 582 aa16.37■□□□□ 0.21
HOXA9-201ENST00000343483 A0A1B0GTI1 187 aa16.36■□□□□ 0.21
HOXA9-201ENST00000343483 SP1P08047 785 aa16.36■□□□□ 0.21
HOXA9-201ENST00000343483 ZNF20P17024 532 aa16.36■□□□□ 0.21
HOXA9-201ENST00000343483 FAUP35544 74 aaKnown RBP16.36■□□□□ 0.21
HOXA9-201ENST00000343483 GPR137CQ8N3F9 429 aa16.36■□□□□ 0.21
HOXA9-201ENST00000343483 TMEM251Q8N6I4 163 aa16.36■□□□□ 0.21
HOXA9-201ENST00000343483 GPR84Q9NQS5 396 aa16.36■□□□□ 0.21
HOXA9-201ENST00000343483 PHF3Q92576 2039 aaKnown RBP16.36■□□□□ 0.21
HOXA9-201ENST00000343483 F5H5K5 113 aa16.36■□□□□ 0.21
HOXA9-201ENST00000343483 CSF1P09603 554 aa16.36■□□□□ 0.21
HOXA9-201ENST00000343483 RAD52P43351 418 aa16.36■□□□□ 0.21
HOXA9-201ENST00000343483 SLC6A9P48067 706 aa16.36■□□□□ 0.21
HOXA9-201ENST00000343483 LHX2P50458 406 aa16.36■□□□□ 0.21
HOXA9-201ENST00000343483 MRPS34P82930 218 aaKnown RBP16.36■□□□□ 0.21
HOXA9-201ENST00000343483 GUCA2AQ02747 115 aa16.36■□□□□ 0.21
HOXA9-201ENST00000343483 FOXC1Q12948 553 aa16.36■□□□□ 0.21
HOXA9-201ENST00000343483 Q6ZTK2 550 aa16.36■□□□□ 0.21
HOXA9-201ENST00000343483 ZC3HAV1Q7Z2W4 902 aaKnown RBP16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms