RNA–Protein interactions for RNA: ENST00000254667.7

PTPRE-201, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRE, Length 5,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-201ENST00000254667 ZNF468Q5VIY5 522 aaPredicted RBP17.09■□□□□ 0.33
PTPRE-201ENST00000254667 SLC35E1Q96K37 410 aa17.09■□□□□ 0.33
PTPRE-201ENST00000254667 ISG20L2Q9H9L3 353 aaKnown RBP17.09■□□□□ 0.33
PTPRE-201ENST00000254667 DNAJB12Q9NXW2 375 aaKnown RBP17.09■□□□□ 0.33
PTPRE-201ENST00000254667 K7EQM0 130 aa17.09■□□□□ 0.33
PTPRE-201ENST00000254667 SIX6O95475 246 aa17.09■□□□□ 0.33
PTPRE-201ENST00000254667 C1QBP02746 253 aa17.09■□□□□ 0.33
PTPRE-201ENST00000254667 OXA1LQ15070 435 aa17.09■□□□□ 0.33
PTPRE-201ENST00000254667 ZIC1Q15915 447 aa17.09■□□□□ 0.33
PTPRE-201ENST00000254667 CLPPQ16740 277 aaPredicted RBP17.09■□□□□ 0.33
PTPRE-201ENST00000254667 SMIM21Q3B7S5 101 aa17.09■□□□□ 0.33
PTPRE-201ENST00000254667 RGS7BPQ6MZT1 257 aaPredicted RBP17.09■□□□□ 0.33
PTPRE-201ENST00000254667 ABI3BPQ7Z7G0 1075 aa17.09■□□□□ 0.33
PTPRE-201ENST00000254667 OR1F12Q8NHA8 337 aa17.09■□□□□ 0.33
PTPRE-201ENST00000254667 CORO2AQ92828 525 aa17.09■□□□□ 0.33
PTPRE-201ENST00000254667 LIN37Q96GY3 246 aaPredicted RBP17.09■□□□□ 0.33
PTPRE-201ENST00000254667 MN1Q10571 1320 aaPredicted RBP17.09■□□□□ 0.33
PTPRE-201ENST00000254667 HLA-HP01893 362 aa17.09■□□□□ 0.33
PTPRE-201ENST00000254667 HAAOP46952 286 aa17.09■□□□□ 0.33
PTPRE-201ENST00000254667 RAB35Q15286 201 aa17.09■□□□□ 0.33
PTPRE-201ENST00000254667 ZNF766Q5HY98 468 aa17.09■□□□□ 0.33
PTPRE-201ENST00000254667 CMTM3Q96MX0 182 aa17.09■□□□□ 0.33
PTPRE-201ENST00000254667 SAMD10Q9BYL1 202 aa17.09■□□□□ 0.33
PTPRE-201ENST00000254667 PLA2G12AQ9BZM1 189 aa17.09■□□□□ 0.33
PTPRE-201ENST00000254667 FBXO4Q9UKT5 387 aa17.09■□□□□ 0.33
PTPRE-201ENST00000254667 RPH3ALQ9UNE2 315 aa17.09■□□□□ 0.33
PTPRE-201ENST00000254667 NUP205Q92621 2012 aa17.09■□□□□ 0.33
PTPRE-201ENST00000254667 RPA2P15927 270 aa17.09■□□□□ 0.33
PTPRE-201ENST00000254667 SDHBP21912 280 aa17.09■□□□□ 0.33
PTPRE-201ENST00000254667 SOX18P35713 384 aa17.09■□□□□ 0.33
PTPRE-201ENST00000254667 TAF9Q16594 264 aa17.09■□□□□ 0.33
PTPRE-201ENST00000254667 Q6ZRG5 221 aa17.09■□□□□ 0.33
PTPRE-201ENST00000254667 SLC25A26Q70HW3 274 aa17.09■□□□□ 0.33
PTPRE-201ENST00000254667 CMTM2Q8TAZ6 248 aa17.09■□□□□ 0.33
PTPRE-201ENST00000254667 GPX8Q8TED1 209 aa17.09■□□□□ 0.33
PTPRE-201ENST00000254667 COL24A1Q17RW2 1714 aa17.09■□□□□ 0.33
PTPRE-201ENST00000254667 HIST2H3PS2Q5TEC6 136 aa17.08■□□□□ 0.33
PTPRE-201ENST00000254667 CDC20BQ86Y33 519 aa17.08■□□□□ 0.33
PTPRE-201ENST00000254667 OSR2Q8N2R0 312 aa17.08■□□□□ 0.33
PTPRE-201ENST00000254667 NIPSNAP3BQ9BS92 247 aa17.08■□□□□ 0.33
PTPRE-201ENST00000254667 FBXL4Q9UKA2 621 aa17.08■□□□□ 0.33
PTPRE-201ENST00000254667 RPS10-NUDT3A0A1W2PQS6 291 aa17.08■□□□□ 0.33
PTPRE-201ENST00000254667 SERPINE3A8MV23 424 aa17.08■□□□□ 0.33
PTPRE-201ENST00000254667 K7EQS6 105 aa17.08■□□□□ 0.33
PTPRE-201ENST00000254667 ABCD4O14678 606 aa17.08■□□□□ 0.33
PTPRE-201ENST00000254667 CD160O95971 181 aa17.08■□□□□ 0.33
PTPRE-201ENST00000254667 RPS10P46783 165 aaKnown RBP17.08■□□□□ 0.33
PTPRE-201ENST00000254667 CDK5Q00535 292 aa17.08■□□□□ 0.33
PTPRE-201ENST00000254667 DHODHQ02127 395 aa17.08■□□□□ 0.33
PTPRE-201ENST00000254667 MSRB3Q8IXL7 192 aa17.08■□□□□ 0.33
PTPRE-201ENST00000254667 FAM185AQ8N0U4 392 aa17.08■□□□□ 0.33
PTPRE-201ENST00000254667 ZFP82Q8N141 532 aa17.08■□□□□ 0.33
PTPRE-201ENST00000254667 C15orf54Q8N8G6 183 aa17.08■□□□□ 0.33
PTPRE-201ENST00000254667 OR10X1Q8NGY0 326 aa17.08■□□□□ 0.33
PTPRE-201ENST00000254667 GPR119Q8TDV5 335 aa17.08■□□□□ 0.33
PTPRE-201ENST00000254667 TAF9BQ9HBM6 251 aa17.08■□□□□ 0.33
PTPRE-201ENST00000254667 LAMP3Q9UQV4 416 aa17.08■□□□□ 0.33
PTPRE-201ENST00000254667 FUT7Q11130 342 aa17.08■□□□□ 0.32
PTPRE-201ENST00000254667 FAM74A1Q5RGS3 127 aa17.08■□□□□ 0.32
PTPRE-201ENST00000254667 VN1R4Q7Z5H5 301 aa17.08■□□□□ 0.32
PTPRE-201ENST00000254667 BATF2Q8N1L9 274 aa17.08■□□□□ 0.32
PTPRE-201ENST00000254667 EDARADDQ8WWZ3 215 aa17.08■□□□□ 0.32
PTPRE-201ENST00000254667 SPSB1Q96BD6 273 aa17.08■□□□□ 0.32
PTPRE-201ENST00000254667 PRRX2Q99811 253 aa17.08■□□□□ 0.32
PTPRE-201ENST00000254667 SIRT5Q9NXA8 310 aa17.08■□□□□ 0.32
PTPRE-201ENST00000254667 PCYT1BQ9Y5K3 369 aaPredicted RBP17.08■□□□□ 0.32
PTPRE-201ENST00000254667 MGMTP16455 207 aa17.08■□□□□ 0.32
PTPRE-201ENST00000254667 OR10A3P58181 314 aa17.08■□□□□ 0.32
PTPRE-201ENST00000254667 WIPI1Q5MNZ9 446 aaPredicted RBP17.08■□□□□ 0.32
PTPRE-201ENST00000254667 RHOUQ7L0Q8 258 aa17.08■□□□□ 0.32
PTPRE-201ENST00000254667 DTWD2Q8NBA8 298 aa17.08■□□□□ 0.32
PTPRE-201ENST00000254667 ASB13Q8WXK3 278 aa17.08■□□□□ 0.32
PTPRE-201ENST00000254667 YIPF5Q969M3 257 aa17.08■□□□□ 0.32
PTPRE-201ENST00000254667 EPXP11678 715 aa17.07■□□□□ 0.32
PTPRE-201ENST00000254667 RAB4AP20338 218 aa17.07■□□□□ 0.32
PTPRE-201ENST00000254667 EPHA2P29317 976 aa17.07■□□□□ 0.32
PTPRE-201ENST00000254667 NKG7Q16617 165 aa17.07■□□□□ 0.32
PTPRE-201ENST00000254667 OR8G2PQ6IF36 304 aa17.07■□□□□ 0.32
PTPRE-201ENST00000254667 DHRS13Q6UX07 377 aa17.07■□□□□ 0.32
PTPRE-201ENST00000254667 NLRC3Q7RTR2 1065 aa17.07■□□□□ 0.32
PTPRE-201ENST00000254667 OR5H6Q8NGV6 325 aa17.07■□□□□ 0.32
PTPRE-201ENST00000254667 ALKBH3Q96Q83 286 aaPredicted RBP17.07■□□□□ 0.32
PTPRE-201ENST00000254667 SPACA5Q96QH8 159 aa17.07■□□□□ 0.32
PTPRE-201ENST00000254667 KIAA1456Q9P272 454 aa17.07■□□□□ 0.32
PTPRE-201ENST00000254667 ST3GAL6Q9Y274 331 aa17.07■□□□□ 0.32
PTPRE-201ENST00000254667 SNRPGP15A8MWD9 76 aa17.07■□□□□ 0.32
PTPRE-201ENST00000254667 SLC17A2O00624 439 aa17.07■□□□□ 0.32
PTPRE-201ENST00000254667 OR5H8P0DN80 308 aa17.07■□□□□ 0.32
PTPRE-201ENST00000254667 ZNF141Q15928 474 aa17.07■□□□□ 0.32
PTPRE-201ENST00000254667 ZNF425Q6IV72 752 aa17.07■□□□□ 0.32
PTPRE-201ENST00000254667 GFRALQ6UXV0 394 aa17.07■□□□□ 0.32
PTPRE-201ENST00000254667 OR4C3Q8NH37 302 aa17.07■□□□□ 0.32
PTPRE-201ENST00000254667 STRCP1A6NGW2 1772 aa17.07■□□□□ 0.32
PTPRE-201ENST00000254667 NUDT19A8MXV4 375 aa17.07■□□□□ 0.32
PTPRE-201ENST00000254667 JTBO76095 146 aa17.07■□□□□ 0.32
PTPRE-201ENST00000254667 RPL35P42766 123 aaKnown RBP17.07■□□□□ 0.32
PTPRE-201ENST00000254667 FOXC1Q12948 553 aa17.07■□□□□ 0.32
PTPRE-201ENST00000254667 ACER2Q5QJU3 275 aa17.07■□□□□ 0.32
PTPRE-201ENST00000254667 OR10G3Q8NGC4 313 aa17.07■□□□□ 0.32
PTPRE-201ENST00000254667 OR4Q3Q8NH05 313 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms