RNA–Protein interactions for RNA: ENST00000251739.9

VPS50-201, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS50, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-201ENST00000251739 HIST1H1CP16403 213 aaKnown RBP8.57□□□□□ -1.04
VPS50-201ENST00000251739 MDKP21741 143 aaPredicted RBP8.57□□□□□ -1.04
VPS50-201ENST00000251739 FPR3P25089 353 aa8.57□□□□□ -1.04
VPS50-201ENST00000251739 MDH1P40925 334 aaKnown RBP8.57□□□□□ -1.04
VPS50-201ENST00000251739 NUDT2P50583 147 aa8.57□□□□□ -1.04
VPS50-201ENST00000251739 TRAP1Q12931 704 aaKnown RBP8.57□□□□□ -1.04
VPS50-201ENST00000251739 DEFB112Q30KQ8 113 aa8.57□□□□□ -1.04
VPS50-201ENST00000251739 RFX4Q33E94 735 aa8.57□□□□□ -1.04
VPS50-201ENST00000251739 NLRC3Q7RTR2 1065 aa8.57□□□□□ -1.04
VPS50-201ENST00000251739 JAZF1Q86VZ6 243 aa8.57□□□□□ -1.04
VPS50-201ENST00000251739 LINC00346Q8IVM7 164 aa8.57□□□□□ -1.04
VPS50-201ENST00000251739 OR8B3Q8NGG8 313 aa8.57□□□□□ -1.04
VPS50-201ENST00000251739 OR10S1Q8NGN2 331 aa8.57□□□□□ -1.04
VPS50-201ENST00000251739 FANK1Q8TC84 345 aa8.57□□□□□ -1.04
VPS50-201ENST00000251739 TMIGD2Q96BF3 282 aa8.57□□□□□ -1.04
VPS50-201ENST00000251739 ERMAPQ96PL5 475 aaPredicted RBP8.57□□□□□ -1.04
VPS50-201ENST00000251739 OR8B2Q96RD0 313 aa8.57□□□□□ -1.04
VPS50-201ENST00000251739 NMNAT3Q96T66 252 aa8.57□□□□□ -1.04
VPS50-201ENST00000251739 ATF6BQ99941 703 aa8.57□□□□□ -1.04
VPS50-201ENST00000251739 KCTD14Q9BQ13 255 aaPredicted RBP8.57□□□□□ -1.04
VPS50-201ENST00000251739 NUDT16L1Q9BRJ7 211 aaKnown RBP8.57□□□□□ -1.04
VPS50-201ENST00000251739 HCAR1Q9BXC0 346 aa8.57□□□□□ -1.04
VPS50-201ENST00000251739 OR52D1Q9H346 318 aa8.57□□□□□ -1.04
VPS50-201ENST00000251739 TPSG1Q9NRR2 321 aa8.57□□□□□ -1.04
VPS50-201ENST00000251739 TMEM100Q9NV29 134 aa8.57□□□□□ -1.04
VPS50-201ENST00000251739 MRPL22Q9NWU5 206 aaKnown RBP8.57□□□□□ -1.04
VPS50-201ENST00000251739 CTSZQ9UBR2 303 aa8.57□□□□□ -1.04
VPS50-201ENST00000251739 CLN8Q9UBY8 286 aa8.57□□□□□ -1.04
VPS50-201ENST00000251739 SRRM5B3KS81 715 aa8.56□□□□□ -1.04
VPS50-201ENST00000251739 HOXA3O43365 443 aaPredicted RBP8.56□□□□□ -1.04
VPS50-201ENST00000251739 FCN3O75636 299 aa8.56□□□□□ -1.04
VPS50-201ENST00000251739 SLC6A6P31641 620 aa8.56□□□□□ -1.04
VPS50-201ENST00000251739 GSSP48637 474 aa8.56□□□□□ -1.04
VPS50-201ENST00000251739 BPIFB3P59826 476 aa8.56□□□□□ -1.04
VPS50-201ENST00000251739 PSME3P61289 254 aa8.56□□□□□ -1.04
VPS50-201ENST00000251739 FGF12P61328 243 aa8.56□□□□□ -1.04
VPS50-201ENST00000251739 HOXA4Q00056 320 aaPredicted RBP8.56□□□□□ -1.04
VPS50-201ENST00000251739 MPPED2Q15777 294 aa8.56□□□□□ -1.04
VPS50-201ENST00000251739 PRAMEF6Q5VXH4 476 aa8.56□□□□□ -1.04
VPS50-201ENST00000251739 C16orf87Q6PH81 154 aa8.56□□□□□ -1.04
VPS50-201ENST00000251739 BRD3OSQ6XYD6 125 aa8.56□□□□□ -1.04
VPS50-201ENST00000251739 ZNF620Q6ZNG0 422 aa8.56□□□□□ -1.04
VPS50-201ENST00000251739 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.56□□□□□ -1.04
VPS50-201ENST00000251739 NAA40Q86UY6 237 aa8.56□□□□□ -1.04
VPS50-201ENST00000251739 OR4K13Q8NH42 304 aa8.56□□□□□ -1.04
VPS50-201ENST00000251739 OR52J3Q8NH60 311 aa8.56□□□□□ -1.04
VPS50-201ENST00000251739 MAP6Q96JE9 813 aa8.56□□□□□ -1.04
VPS50-201ENST00000251739 TBX15Q96SF7 602 aa8.56□□□□□ -1.04
VPS50-201ENST00000251739 DDOQ99489 341 aa8.56□□□□□ -1.04
VPS50-201ENST00000251739 MYLK2Q9H1R3 596 aa8.56□□□□□ -1.04
VPS50-201ENST00000251739 ZNF446Q9NWS9 450 aa8.56□□□□□ -1.04
VPS50-201ENST00000251739 KCNG2Q9UJ96 466 aa8.56□□□□□ -1.04
VPS50-201ENST00000251739 SAMD4AQ9UPU9 718 aaKnown RBP8.56□□□□□ -1.04
VPS50-201ENST00000251739 AURKCQ9UQB9 309 aa8.56□□□□□ -1.04
VPS50-201ENST00000251739 FAM32AQ9Y421 112 aaKnown RBP8.56□□□□□ -1.04
VPS50-201ENST00000251739 C5orf63A6NC05 138 aa8.55□□□□□ -1.04
VPS50-201ENST00000251739 F5H5K5 113 aa8.55□□□□□ -1.04
VPS50-201ENST00000251739 M0R135 149 aa8.55□□□□□ -1.04
VPS50-201ENST00000251739 LGALS8O00214 317 aa8.55□□□□□ -1.04
VPS50-201ENST00000251739 ENSAO43768 121 aaKnown RBP8.55□□□□□ -1.04
VPS50-201ENST00000251739 IDH3BO43837 385 aa8.55□□□□□ -1.04
VPS50-201ENST00000251739 CCDC22O60826 627 aa8.55□□□□□ -1.04
VPS50-201ENST00000251739 NDUFA7O95182 113 aa8.55□□□□□ -1.04
VPS50-201ENST00000251739 PSKH1P11801 424 aa8.55□□□□□ -1.04
VPS50-201ENST00000251739 CFHR2P36980 270 aa8.55□□□□□ -1.04
VPS50-201ENST00000251739 NPY4RP50391 375 aa8.55□□□□□ -1.04
VPS50-201ENST00000251739 SLC36A3Q495N2 470 aa8.55□□□□□ -1.04
VPS50-201ENST00000251739 PDLIM3Q53GG5 364 aaPredicted RBP8.55□□□□□ -1.04
VPS50-201ENST00000251739 GLYATQ6IB77 296 aa8.55□□□□□ -1.04
VPS50-201ENST00000251739 Q6YL49 198 aa8.55□□□□□ -1.04
VPS50-201ENST00000251739 SPATC1Q76KD6 591 aa8.55□□□□□ -1.04
VPS50-201ENST00000251739 TMEM86BQ8N661 226 aa8.55□□□□□ -1.04
VPS50-201ENST00000251739 C19orf18Q8NEA5 215 aa8.55□□□□□ -1.04
VPS50-201ENST00000251739 ZNF799Q96GE5 643 aa8.55□□□□□ -1.04
VPS50-201ENST00000251739 PITX2Q99697 317 aa8.55□□□□□ -1.04
VPS50-201ENST00000251739 GORASP2Q9H8Y8 452 aa8.55□□□□□ -1.04
VPS50-201ENST00000251739 SMURF1Q9HCE7 757 aa8.55□□□□□ -1.04
VPS50-201ENST00000251739 SPAG4Q9NPE6 437 aa8.55□□□□□ -1.04
VPS50-201ENST00000251739 NOX4Q9NPH5 578 aa8.55□□□□□ -1.04
VPS50-201ENST00000251739 KRCC1Q9NPI7 259 aaPredicted RBP8.55□□□□□ -1.04
VPS50-201ENST00000251739 RPRD1BQ9NQG5 326 aaKnown RBP8.55□□□□□ -1.04
VPS50-201ENST00000251739 TMCC3Q9ULS5 477 aa8.55□□□□□ -1.04
VPS50-201ENST00000251739 A0A1B0GUS0 222 aa8.54□□□□□ -1.04
VPS50-201ENST00000251739 CD300LBA8K4G0 201 aa8.54□□□□□ -1.04
VPS50-201ENST00000251739 ZNF879B4DU55 563 aa8.54□□□□□ -1.04
VPS50-201ENST00000251739 GMDSO60547 372 aa8.54□□□□□ -1.04
VPS50-201ENST00000251739 RENP00797 406 aa8.54□□□□□ -1.04
VPS50-201ENST00000251739 LCATP04180 440 aa8.54□□□□□ -1.04
VPS50-201ENST00000251739 SFTPBP07988 381 aa8.54□□□□□ -1.04
VPS50-201ENST00000251739 MELTFP08582 738 aa8.54□□□□□ -1.04
VPS50-201ENST00000251739 CA6P23280 308 aa8.54□□□□□ -1.04
VPS50-201ENST00000251739 OMGP23515 440 aa8.54□□□□□ -1.04
VPS50-201ENST00000251739 CENPAP49450 140 aa8.54□□□□□ -1.04
VPS50-201ENST00000251739 SMIM11AP58511 58 aa8.54□□□□□ -1.04
VPS50-201ENST00000251739 ZNF92Q03936 586 aa8.54□□□□□ -1.04
VPS50-201ENST00000251739 MALLQ13021 153 aa8.54□□□□□ -1.04
VPS50-201ENST00000251739 DOC2BQ14184 412 aa8.54□□□□□ -1.04
VPS50-201ENST00000251739 PCK2Q16822 640 aa8.54□□□□□ -1.04
VPS50-201ENST00000251739 SNAI3Q3KNW1 292 aa8.54□□□□□ -1.04
VPS50-201ENST00000251739 ZNF362Q5T0B9 420 aaPredicted RBP8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms