RNA–Protein interactions for RNA: ENST00000216211.8

UPK3A-201, Transcript of uroplakin 3A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UPK3A, Length 1,051 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-201ENST00000216211 PPP1R3DO95685 299 aa12.6□□□□□ -0.39
UPK3A-201ENST00000216211 TXNDC12O95881 172 aa12.6□□□□□ -0.39
UPK3A-201ENST00000216211 ZNF12P17014 697 aa12.6□□□□□ -0.39
UPK3A-201ENST00000216211 RGS6P49758 472 aa12.6□□□□□ -0.39
UPK3A-201ENST00000216211 MMP16P51512 607 aa12.6□□□□□ -0.39
UPK3A-201ENST00000216211 UBA52P62987 128 aaKnown RBP12.6□□□□□ -0.39
UPK3A-201ENST00000216211 DBPQ10586 325 aaPredicted RBP12.6□□□□□ -0.39
UPK3A-201ENST00000216211 CORO6Q6QEF8 472 aa12.6□□□□□ -0.39
UPK3A-201ENST00000216211 SMARCD3Q6STE5 483 aa12.6□□□□□ -0.39
UPK3A-201ENST00000216211 FBXW12Q6X9E4 464 aa12.6□□□□□ -0.39
UPK3A-201ENST00000216211 SIGLECL1Q8N7X8 197 aa12.6□□□□□ -0.39
UPK3A-201ENST00000216211 OR8G5Q8NG78 346 aa12.6□□□□□ -0.39
UPK3A-201ENST00000216211 OR10G2Q8NGC3 310 aa12.6□□□□□ -0.39
UPK3A-201ENST00000216211 ERMAPQ96PL5 475 aaPredicted RBP12.6□□□□□ -0.39
UPK3A-201ENST00000216211 FUZQ9BT04 418 aa12.6□□□□□ -0.39
UPK3A-201ENST00000216211 SRA1Q9HD15 236 aaKnown RBP12.6□□□□□ -0.39
UPK3A-201ENST00000216211 GCM1Q9NP62 436 aa12.6□□□□□ -0.39
UPK3A-201ENST00000216211 KRCC1Q9NPI7 259 aaPredicted RBP12.6□□□□□ -0.39
UPK3A-201ENST00000216211 ATPIF1Q9UII2 106 aa12.6□□□□□ -0.39
UPK3A-201ENST00000216211 POLR3KQ9Y2Y1 108 aaPredicted RBP12.6□□□□□ -0.39
UPK3A-201ENST00000216211 INSIG2Q9Y5U4 225 aa12.6□□□□□ -0.39
UPK3A-201ENST00000216211 AUP1Q9Y679 476 aa12.6□□□□□ -0.39
UPK3A-201ENST00000216211 LHFPL6Q9Y693 200 aa12.6□□□□□ -0.39
UPK3A-201ENST00000216211 IGHV3-64DA0A0J9YX35 117 aa12.59□□□□□ -0.39
UPK3A-201ENST00000216211 LOC100130705A0A1B0GUX0 176 aa12.59□□□□□ -0.39
UPK3A-201ENST00000216211 A8MXK9 166 aa12.59□□□□□ -0.39
UPK3A-201ENST00000216211 J3QW42 95 aa12.59□□□□□ -0.39
UPK3A-201ENST00000216211 MITFO75030 526 aaPredicted RBP12.59□□□□□ -0.39
UPK3A-201ENST00000216211 CCNB2O95067 398 aa12.59□□□□□ -0.39
UPK3A-201ENST00000216211 ZNF205O95201 554 aa12.59□□□□□ -0.39
UPK3A-201ENST00000216211 CRABP1P29762 137 aa12.59□□□□□ -0.39
UPK3A-201ENST00000216211 MDH2P40926 338 aaKnown RBP12.59□□□□□ -0.39
UPK3A-201ENST00000216211 HIST1H3AP68431 136 aa12.59□□□□□ -0.39
UPK3A-201ENST00000216211 ESCO2Q56NI9 601 aa12.59□□□□□ -0.39
UPK3A-201ENST00000216211 KLF17Q5JT82 389 aaPredicted RBP12.59□□□□□ -0.39
UPK3A-201ENST00000216211 HIST2H3PS2Q5TEC6 136 aa12.59□□□□□ -0.39
UPK3A-201ENST00000216211 LEG1Q6P5S2 330 aa12.59□□□□□ -0.39
UPK3A-201ENST00000216211 DNM1P34Q6PK57 102 aa12.59□□□□□ -0.39
UPK3A-201ENST00000216211 HIST2H3AQ71DI3 136 aa12.59□□□□□ -0.39
UPK3A-201ENST00000216211 GJC3Q8NFK1 279 aa12.59□□□□□ -0.39
UPK3A-201ENST00000216211 OR5L1Q8NGL2 311 aa12.59□□□□□ -0.39
UPK3A-201ENST00000216211 FANK1Q8TC84 345 aa12.59□□□□□ -0.39
UPK3A-201ENST00000216211 APOBEC3DQ96AK3 386 aaPredicted RBP12.59□□□□□ -0.39
UPK3A-201ENST00000216211 MEGF10Q96KG7 1140 aa12.59□□□□□ -0.39
UPK3A-201ENST00000216211 FEVQ99581 238 aa12.59□□□□□ -0.39
UPK3A-201ENST00000216211 COQ7Q99807 217 aa12.59□□□□□ -0.39
UPK3A-201ENST00000216211 GABARAPL3Q9BY60 117 aa12.59□□□□□ -0.39
UPK3A-201ENST00000216211 HDHD2Q9H0R4 259 aa12.59□□□□□ -0.39
UPK3A-201ENST00000216211 WDR76Q9H967 626 aa12.59□□□□□ -0.39
UPK3A-201ENST00000216211 KRT84Q9NSB2 600 aa12.59□□□□□ -0.39
UPK3A-201ENST00000216211 DDX28Q9NUL7 540 aaKnown RBP12.59□□□□□ -0.39
UPK3A-201ENST00000216211 KIF17Q9P2E2 1029 aa12.59□□□□□ -0.39
UPK3A-201ENST00000216211 ZNF69Q9UC07 566 aa12.59□□□□□ -0.39
UPK3A-201ENST00000216211 NUP50Q9UKX7 468 aa12.59□□□□□ -0.39
UPK3A-201ENST00000216211 B9D1Q9UPM9 204 aa12.59□□□□□ -0.39
UPK3A-201ENST00000216211 MYRFQ9Y2G1 1151 aa12.59□□□□□ -0.39
UPK3A-201ENST00000216211 IGLV1-36A0A0B4J1U3 117 aa12.58□□□□□ -0.4
UPK3A-201ENST00000216211 CEACAM18A8MTB9 384 aa12.58□□□□□ -0.4
UPK3A-201ENST00000216211 MLNRO43193 412 aa12.58□□□□□ -0.4
UPK3A-201ENST00000216211 CLIC3O95833 236 aa12.58□□□□□ -0.4
UPK3A-201ENST00000216211 CYB5R3P00387 301 aaPredicted RBP12.58□□□□□ -0.4
UPK3A-201ENST00000216211 SMIM18P0DKX4 95 aa12.58□□□□□ -0.4
UPK3A-201ENST00000216211 EGR1P18146 543 aa12.58□□□□□ -0.4
UPK3A-201ENST00000216211 RSPO1Q2MKA7 263 aaPredicted RBP12.58□□□□□ -0.4
UPK3A-201ENST00000216211 KCTD21Q4G0X4 260 aa12.58□□□□□ -0.4
UPK3A-201ENST00000216211 AWAT1Q58HT5 328 aa12.58□□□□□ -0.4
UPK3A-201ENST00000216211 ZNF691Q5VV52 312 aa12.58□□□□□ -0.4
UPK3A-201ENST00000216211 ZNF770Q6IQ21 691 aaPredicted RBP12.58□□□□□ -0.4
UPK3A-201ENST00000216211 SLC27A4Q6P1M0 643 aa12.58□□□□□ -0.4
UPK3A-201ENST00000216211 THAP5Q7Z6K1 395 aa12.58□□□□□ -0.4
UPK3A-201ENST00000216211 JAZF1Q86VZ6 243 aa12.58□□□□□ -0.4
UPK3A-201ENST00000216211 LINC00346Q8IVM7 164 aa12.58□□□□□ -0.4
UPK3A-201ENST00000216211 C8orf59Q8N0T1 100 aaPredicted RBP12.58□□□□□ -0.4
UPK3A-201ENST00000216211 BCL6BQ8N143 479 aaPredicted RBP12.58□□□□□ -0.4
UPK3A-201ENST00000216211 OR6V1Q8N148 313 aa12.58□□□□□ -0.4
UPK3A-201ENST00000216211 MUC20Q8N307 709 aaPredicted RBP12.58□□□□□ -0.4
UPK3A-201ENST00000216211 LINC00471Q8N535 108 aa12.58□□□□□ -0.4
UPK3A-201ENST00000216211 BHLHE23Q8NDY6 225 aa12.58□□□□□ -0.4
UPK3A-201ENST00000216211 OR13G1Q8NGZ3 307 aa12.58□□□□□ -0.4
UPK3A-201ENST00000216211 ZMYND19Q96E35 227 aaPredicted RBP12.58□□□□□ -0.4
UPK3A-201ENST00000216211 ZNF582Q96NG8 517 aaPredicted RBP12.58□□□□□ -0.4
UPK3A-201ENST00000216211 DUX5Q96PT3 197 aa12.58□□□□□ -0.4
UPK3A-201ENST00000216211 NMNAT3Q96T66 252 aa12.58□□□□□ -0.4
UPK3A-201ENST00000216211 MRI1Q9BV20 369 aa12.58□□□□□ -0.4
UPK3A-201ENST00000216211 C1QTNF5Q9BXJ0 243 aa12.58□□□□□ -0.4
UPK3A-201ENST00000216211 OR52D1Q9H346 318 aa12.58□□□□□ -0.4
UPK3A-201ENST00000216211 OR5V1Q9UGF6 321 aa12.58□□□□□ -0.4
UPK3A-201ENST00000216211 TMCC3Q9ULS5 477 aa12.58□□□□□ -0.4
UPK3A-201ENST00000216211 HSPE1-MOB4S4R3N1 261 aa12.58□□□□□ -0.4
UPK3A-201ENST00000216211 CMYA5Q8N3K9 4069 aa12.58□□□□□ -0.4
UPK3A-201ENST00000216211 F5H5P2 479 aa12.57□□□□□ -0.4
UPK3A-201ENST00000216211 IFNL4K9M1U5 179 aa12.57□□□□□ -0.4
UPK3A-201ENST00000216211 SPRY1O43609 319 aaPredicted RBP12.57□□□□□ -0.4
UPK3A-201ENST00000216211 RENP00797 406 aa12.57□□□□□ -0.4
UPK3A-201ENST00000216211 WNT2P09544 360 aa12.57□□□□□ -0.4
UPK3A-201ENST00000216211 HIST1H1CP16403 213 aaKnown RBP12.57□□□□□ -0.4
UPK3A-201ENST00000216211 SRP9P49458 86 aaKnown RBP12.57□□□□□ -0.4
UPK3A-201ENST00000216211 GTF2A1P52655 376 aaPredicted RBP12.57□□□□□ -0.4
UPK3A-201ENST00000216211 PRSS12P56730 875 aa12.57□□□□□ -0.4
UPK3A-201ENST00000216211 COX10Q12887 443 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms