RNA–Protein interactions for RNA: ENST00000623056.3

LDB3-209, Transcript of LIM domain binding 3, humanhuman

TSL 5 BASIC

Gene LDB3, Length 2,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-209ENST00000623056 ACTR1BP42025 376 aa12.61□□□□□ -0.39
LDB3-209ENST00000623056 DVL1P1P54792 670 aaPredicted RBP12.61□□□□□ -0.39
LDB3-209ENST00000623056 ACTR1AP61163 376 aa12.61□□□□□ -0.39
LDB3-209ENST00000623056 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.61□□□□□ -0.39
LDB3-209ENST00000623056 NKAIN3Q8N8D7 197 aa12.61□□□□□ -0.39
LDB3-209ENST00000623056 OR14C36Q8NHC7 312 aa12.61□□□□□ -0.39
LDB3-209ENST00000623056 SLC39A7Q92504 469 aa12.61□□□□□ -0.39
LDB3-209ENST00000623056 OR5B2Q96R09 309 aa12.61□□□□□ -0.39
LDB3-209ENST00000623056 REV3LO60673 3130 aa12.6□□□□□ -0.39
LDB3-209ENST00000623056 A0A0A6YYC8 382 aaPredicted RBP12.6□□□□□ -0.39
LDB3-209ENST00000623056 IGLV1-36A0A0B4J1U3 117 aa12.6□□□□□ -0.39
LDB3-209ENST00000623056 PRSS37A4D1T9 235 aa12.6□□□□□ -0.39
LDB3-209ENST00000623056 I3L1I5 382 aaPredicted RBP12.6□□□□□ -0.39
LDB3-209ENST00000623056 HCRTR1O43613 425 aa12.6□□□□□ -0.39
LDB3-209ENST00000623056 NDUFS6O75380 124 aaKnown RBP12.6□□□□□ -0.39
LDB3-209ENST00000623056 SRSF10O75494 262 aaKnown RBP12.6□□□□□ -0.39
LDB3-209ENST00000623056 HTR3BO95264 441 aa12.6□□□□□ -0.39
LDB3-209ENST00000623056 ADH1BP00325 375 aa12.6□□□□□ -0.39
LDB3-209ENST00000623056 OR8U8P0C7N1 319 aa12.6□□□□□ -0.39
LDB3-209ENST00000623056 TBPP20226 339 aa12.6□□□□□ -0.39
LDB3-209ENST00000623056 SULT1A2P50226 295 aa12.6□□□□□ -0.39
LDB3-209ENST00000623056 INSM1Q01101 510 aaPredicted RBP12.6□□□□□ -0.39
LDB3-209ENST00000623056 EBPQ15125 230 aaKnown RBP12.6□□□□□ -0.39
LDB3-209ENST00000623056 FAM78AQ5JUQ0 283 aa12.6□□□□□ -0.39
LDB3-209ENST00000623056 EIF5AL1Q6IS14 154 aaKnown RBP12.6□□□□□ -0.39
LDB3-209ENST00000623056 CLEC18BQ6UXF7 455 aa12.6□□□□□ -0.39
LDB3-209ENST00000623056 DTWD2Q8NBA8 298 aa12.6□□□□□ -0.39
LDB3-209ENST00000623056 OR4K15Q8NH41 348 aa12.6□□□□□ -0.39
LDB3-209ENST00000623056 SECTM1Q8WVN6 248 aa12.6□□□□□ -0.39
LDB3-209ENST00000623056 TMEM230Q96A57 120 aa12.6□□□□□ -0.39
LDB3-209ENST00000623056 C5orf66Q9H5L9 145 aa12.6□□□□□ -0.39
LDB3-209ENST00000623056 PARP11Q9NR21 331 aa12.6□□□□□ -0.39
LDB3-209ENST00000623056 PLA2G2EQ9NZK7 142 aa12.6□□□□□ -0.39
LDB3-209ENST00000623056 KPTNQ9Y664 436 aa12.6□□□□□ -0.39
LDB3-209ENST00000623056 R4GMQ9 66 aa12.6□□□□□ -0.39
LDB3-209ENST00000623056 SZT2Q5T011 3432 aa12.6□□□□□ -0.39
LDB3-209ENST00000623056 TBC1D3DA0A087WVF3 549 aa12.6□□□□□ -0.39
LDB3-209ENST00000623056 POM121BA6NF01 834 aa12.6□□□□□ -0.39
LDB3-209ENST00000623056 TBC1D3LB9A6J9 549 aa12.6□□□□□ -0.39
LDB3-209ENST00000623056 SFT2D2O95562 160 aa12.6□□□□□ -0.39
LDB3-209ENST00000623056 CTSBP07858 339 aa12.6□□□□□ -0.39
LDB3-209ENST00000623056 HNRNPA1P09651 372 aaKnown RBP eCLIP12.6□□□□□ -0.39
LDB3-209ENST00000623056 TBC1D3HP0C7X1 549 aa12.6□□□□□ -0.39
LDB3-209ENST00000623056 HPGDP15428 266 aa12.6□□□□□ -0.39
LDB3-209ENST00000623056 NQO2P16083 231 aa12.6□□□□□ -0.39
LDB3-209ENST00000623056 CTLA4P16410 223 aa12.6□□□□□ -0.39
LDB3-209ENST00000623056 GPR3P46089 330 aa12.6□□□□□ -0.39
LDB3-209ENST00000623056 EIF5AP63241 154 aaKnown RBP12.6□□□□□ -0.39
LDB3-209ENST00000623056 RAB32Q13637 225 aa12.6□□□□□ -0.39
LDB3-209ENST00000623056 TBC1D3CQ6IPX1 549 aa12.6□□□□□ -0.39
LDB3-209ENST00000623056 TBC1D3Q8IZP1 549 aaPredicted RBP12.6□□□□□ -0.39
LDB3-209ENST00000623056 TERB2Q8NHR7 220 aa12.6□□□□□ -0.39
LDB3-209ENST00000623056 METTL21AQ8WXB1 218 aa12.6□□□□□ -0.39
LDB3-209ENST00000623056 ISOC2Q96AB3 205 aa12.6□□□□□ -0.39
LDB3-209ENST00000623056 OR10C1Q96KK4 312 aa12.6□□□□□ -0.39
LDB3-209ENST00000623056 RSRP1Q9BUV0 290 aa12.6□□□□□ -0.39
LDB3-209ENST00000623056 OR10A5Q9H207 317 aa12.6□□□□□ -0.39
LDB3-209ENST00000623056 G6PC2Q9NQR9 355 aa12.6□□□□□ -0.39
LDB3-209ENST00000623056 FLVCR1Q9Y5Y0 555 aa12.6□□□□□ -0.39
LDB3-209ENST00000623056 POMT1Q9Y6A1 747 aa12.6□□□□□ -0.39
LDB3-209ENST00000623056 A0A1W2PPH5 198 aa12.59□□□□□ -0.39
LDB3-209ENST00000623056 PMS2P1A4D2B8 440 aa12.59□□□□□ -0.39
LDB3-209ENST00000623056 SNRNP70P08621 437 aaKnown RBP12.59□□□□□ -0.39
LDB3-209ENST00000623056 FBP1P09467 338 aa12.59□□□□□ -0.39
LDB3-209ENST00000623056 OR8U9P0C7N5 309 aa12.59□□□□□ -0.39
LDB3-209ENST00000623056 PRF1P14222 555 aa12.59□□□□□ -0.39
LDB3-209ENST00000623056 ACKR3P25106 362 aa12.59□□□□□ -0.39
LDB3-209ENST00000623056 NPY4RP50391 375 aa12.59□□□□□ -0.39
LDB3-209ENST00000623056 ACKR1Q16570 336 aa12.59□□□□□ -0.39
LDB3-209ENST00000623056 AWAT1Q58HT5 328 aa12.59□□□□□ -0.39
LDB3-209ENST00000623056 KRBOX4Q5JUW0 171 aa12.59□□□□□ -0.39
LDB3-209ENST00000623056 C1QL3Q5VWW1 255 aa12.59□□□□□ -0.39
LDB3-209ENST00000623056 MED25Q71SY5 747 aa12.59□□□□□ -0.39
LDB3-209ENST00000623056 FAM160A2Q8N612 972 aaPredicted RBP12.59□□□□□ -0.39
LDB3-209ENST00000623056 OR2I1PQ8NGU4 316 aa12.59□□□□□ -0.39
LDB3-209ENST00000623056 OR8U1Q8NH10 309 aa12.59□□□□□ -0.39
LDB3-209ENST00000623056 OR52N5Q8NH56 324 aa12.59□□□□□ -0.39
LDB3-209ENST00000623056 TSACCQ96A04 125 aaPredicted RBP12.59□□□□□ -0.39
LDB3-209ENST00000623056 ZNF285Q96NJ3 590 aa12.59□□□□□ -0.39
LDB3-209ENST00000623056 TAAR9Q96RI9 348 aa12.59□□□□□ -0.39
LDB3-209ENST00000623056 CCDC3Q9BQI4 270 aa12.59□□□□□ -0.39
LDB3-209ENST00000623056 PCOLCE2Q9UKZ9 415 aa12.59□□□□□ -0.39
LDB3-209ENST00000623056 LOC101059948A0A1B0GTJ6 334 aa12.59□□□□□ -0.39
LDB3-209ENST00000623056 hCG_1809904A0A1W2PP81 198 aa12.59□□□□□ -0.39
LDB3-209ENST00000623056 A0A1W2PR64 198 aa12.59□□□□□ -0.39
LDB3-209ENST00000623056 A0A1W2PRV1 198 aa12.59□□□□□ -0.39
LDB3-209ENST00000623056 C7orf77A4D0Y5 90 aa12.59□□□□□ -0.39
LDB3-209ENST00000623056 GMFGO60234 142 aa12.59□□□□□ -0.39
LDB3-209ENST00000623056 BGLAPP02818 100 aa12.59□□□□□ -0.39
LDB3-209ENST00000623056 RAB5AP20339 215 aa12.59□□□□□ -0.39
LDB3-209ENST00000623056 PMELP40967 661 aa12.59□□□□□ -0.39
LDB3-209ENST00000623056 EIF2S3P41091 472 aaKnown RBP12.59□□□□□ -0.39
LDB3-209ENST00000623056 CSNK1EP49674 416 aaKnown RBP12.59□□□□□ -0.39
LDB3-209ENST00000623056 STARD6P59095 220 aa12.59□□□□□ -0.39
LDB3-209ENST00000623056 QRFPP83859 136 aa12.59□□□□□ -0.39
LDB3-209ENST00000623056 ANKRD55Q3KP44 614 aa12.59□□□□□ -0.39
LDB3-209ENST00000623056 POMZP3Q6PJE2 187 aa12.59□□□□□ -0.39
LDB3-209ENST00000623056 CHRDL2Q6WN34 429 aa12.59□□□□□ -0.39
LDB3-209ENST00000623056 Q6ZRG5 221 aa12.59□□□□□ -0.39
LDB3-209ENST00000623056 RTL10Q7L3V2 364 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms