RNA–Protein interactions for RNA: ENST00000621245.4

CPNE3-210, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-210ENST00000621245 CCDC22O60826 627 aa9.56□□□□□ -0.88
CPNE3-210ENST00000621245 WNT2P09544 360 aa9.56□□□□□ -0.88
CPNE3-210ENST00000621245 ACSM4P0C7M7 580 aa9.56□□□□□ -0.88
CPNE3-210ENST00000621245 TNFRSF1AP19438 455 aa9.56□□□□□ -0.88
CPNE3-210ENST00000621245 GGT2P36268 569 aa9.56□□□□□ -0.88
CPNE3-210ENST00000621245 MDH2P40926 338 aaKnown RBP9.56□□□□□ -0.88
CPNE3-210ENST00000621245 COX10Q12887 443 aa9.56□□□□□ -0.88
CPNE3-210ENST00000621245 SLC35F1Q5T1Q4 408 aa9.56□□□□□ -0.88
CPNE3-210ENST00000621245 PRAMEF6Q5VXH4 476 aa9.56□□□□□ -0.88
CPNE3-210ENST00000621245 RRM2BQ7LG56 351 aa9.56□□□□□ -0.88
CPNE3-210ENST00000621245 KLBQ86Z14 1044 aa9.56□□□□□ -0.88
CPNE3-210ENST00000621245 KLHL36Q8N4N3 616 aa9.56□□□□□ -0.88
CPNE3-210ENST00000621245 OR8G5Q8NG78 346 aa9.56□□□□□ -0.88
CPNE3-210ENST00000621245 POP5Q969H6 163 aaKnown RBP9.56□□□□□ -0.88
CPNE3-210ENST00000621245 MAP6Q96JE9 813 aa9.56□□□□□ -0.88
CPNE3-210ENST00000621245 TMEM246Q9BRR3 403 aa9.56□□□□□ -0.88
CPNE3-210ENST00000621245 WACQ9BTA9 647 aa9.56□□□□□ -0.88
CPNE3-210ENST00000621245 CDADC1Q9BWV3 514 aa9.56□□□□□ -0.88
CPNE3-210ENST00000621245 EGLN3Q9H6Z9 239 aa9.56□□□□□ -0.88
CPNE3-210ENST00000621245 SPAG4Q9NPE6 437 aa9.56□□□□□ -0.88
CPNE3-210ENST00000621245 ADA2Q9NZK5 511 aa9.56□□□□□ -0.88
CPNE3-210ENST00000621245 NUP50Q9UKX7 468 aa9.56□□□□□ -0.88
CPNE3-210ENST00000621245 AURKCQ9UQB9 309 aa9.56□□□□□ -0.88
CPNE3-210ENST00000621245 NOTCH1P46531 2555 aa9.55□□□□□ -0.88
CPNE3-210ENST00000621245 A0A1B0GWJ7 208 aa9.55□□□□□ -0.88
CPNE3-210ENST00000621245 F5H5K5 113 aa9.55□□□□□ -0.88
CPNE3-210ENST00000621245 ARPC2O15144 300 aa9.55□□□□□ -0.88
CPNE3-210ENST00000621245 KCNAB3O43448 404 aa9.55□□□□□ -0.88
CPNE3-210ENST00000621245 FCN3O75636 299 aa9.55□□□□□ -0.88
CPNE3-210ENST00000621245 HTR3BO95264 441 aa9.55□□□□□ -0.88
CPNE3-210ENST00000621245 RPS2P15880 293 aaKnown RBP9.55□□□□□ -0.88
CPNE3-210ENST00000621245 PYCR1P32322 319 aa9.55□□□□□ -0.88
CPNE3-210ENST00000621245 GSSP48637 474 aa9.55□□□□□ -0.88
CPNE3-210ENST00000621245 RPS6KA3P51812 740 aa9.55□□□□□ -0.88
CPNE3-210ENST00000621245 PAX8Q06710 450 aa9.55□□□□□ -0.88
CPNE3-210ENST00000621245 MAB21L1Q13394 359 aa9.55□□□□□ -0.88
CPNE3-210ENST00000621245 GK2Q14410 553 aaPredicted RBP9.55□□□□□ -0.88
CPNE3-210ENST00000621245 MPPED2Q15777 294 aa9.55□□□□□ -0.88
CPNE3-210ENST00000621245 RFX4Q33E94 735 aa9.55□□□□□ -0.88
CPNE3-210ENST00000621245 SNAI3Q3KNW1 292 aa9.55□□□□□ -0.88
CPNE3-210ENST00000621245 ESCO2Q56NI9 601 aa9.55□□□□□ -0.88
CPNE3-210ENST00000621245 CLEC12AQ5QGZ9 265 aa9.55□□□□□ -0.88
CPNE3-210ENST00000621245 COLCA1Q6ZS62 124 aa9.55□□□□□ -0.88
CPNE3-210ENST00000621245 TEX29Q8N6K0 151 aa9.55□□□□□ -0.88
CPNE3-210ENST00000621245 CYB561A3Q8NBI2 242 aa9.55□□□□□ -0.88
CPNE3-210ENST00000621245 OR9Q2Q8NGE9 314 aa9.55□□□□□ -0.88
CPNE3-210ENST00000621245 OR8D4Q8NGM9 314 aa9.55□□□□□ -0.88
CPNE3-210ENST00000621245 APOBEC3DQ96AK3 386 aaPredicted RBP9.55□□□□□ -0.88
CPNE3-210ENST00000621245 JMJD8Q96S16 334 aa9.55□□□□□ -0.88
CPNE3-210ENST00000621245 SSBP3Q9BWW4 388 aaPredicted RBP9.55□□□□□ -0.88
CPNE3-210ENST00000621245 FAM107BQ9H098 131 aa9.55□□□□□ -0.88
CPNE3-210ENST00000621245 HDHD2Q9H0R4 259 aa9.55□□□□□ -0.88
CPNE3-210ENST00000621245 ATPIF1Q9UII2 106 aa9.55□□□□□ -0.88
CPNE3-210ENST00000621245 FAM32AQ9Y421 112 aaKnown RBP9.55□□□□□ -0.88
CPNE3-210ENST00000621245 TRAV40A0A0B4J280 105 aa9.54□□□□□ -0.88
CPNE3-210ENST00000621245 IGHV2-70DA0A0C4DH43 119 aa9.54□□□□□ -0.88
CPNE3-210ENST00000621245 TVP23AA6NH52 213 aa9.54□□□□□ -0.88
CPNE3-210ENST00000621245 B2RBV5 119 aa9.54□□□□□ -0.88
CPNE3-210ENST00000621245 C22orf46C9J442 243 aa9.54□□□□□ -0.88
CPNE3-210ENST00000621245 LCE2BO14633 110 aa9.54□□□□□ -0.88
CPNE3-210ENST00000621245 FAM20BO75063 409 aa9.54□□□□□ -0.88
CPNE3-210ENST00000621245 GADD45GO95257 159 aa9.54□□□□□ -0.88
CPNE3-210ENST00000621245 HKR1P10072 659 aa9.54□□□□□ -0.88
CPNE3-210ENST00000621245 FPR3P25089 353 aa9.54□□□□□ -0.88
CPNE3-210ENST00000621245 FPR2P25090 351 aa9.54□□□□□ -0.88
CPNE3-210ENST00000621245 RRM2P31350 389 aa9.54□□□□□ -0.88
CPNE3-210ENST00000621245 RAD23AP54725 363 aa9.54□□□□□ -0.88
CPNE3-210ENST00000621245 TRAP1Q12931 704 aaKnown RBP9.54□□□□□ -0.88
CPNE3-210ENST00000621245 PPP1R8Q12972 351 aaKnown RBP9.54□□□□□ -0.88
CPNE3-210ENST00000621245 ZNF404Q494X3 552 aa9.54□□□□□ -0.88
CPNE3-210ENST00000621245 PGBD2Q6P3X8 592 aa9.54□□□□□ -0.88
CPNE3-210ENST00000621245 ZNF620Q6ZNG0 422 aa9.54□□□□□ -0.88
CPNE3-210ENST00000621245 ZBTB46Q86UZ6 589 aa9.54□□□□□ -0.88
CPNE3-210ENST00000621245 PARP8Q8N3A8 854 aa9.54□□□□□ -0.88
CPNE3-210ENST00000621245 GJC3Q8NFK1 279 aa9.54□□□□□ -0.88
CPNE3-210ENST00000621245 OR51L1Q8NGJ5 315 aa9.54□□□□□ -0.88
CPNE3-210ENST00000621245 OR2AE1Q8NHA4 323 aa9.54□□□□□ -0.88
CPNE3-210ENST00000621245 PYURFQ96I23 114 aa9.54□□□□□ -0.88
CPNE3-210ENST00000621245 ZNF582Q96NG8 517 aaPredicted RBP9.54□□□□□ -0.88
CPNE3-210ENST00000621245 IFT27Q9BW83 186 aa9.54□□□□□ -0.88
CPNE3-210ENST00000621245 NDEL1Q9GZM8 345 aa9.54□□□□□ -0.88
CPNE3-210ENST00000621245 GORASP2Q9H8Y8 452 aa9.54□□□□□ -0.88
CPNE3-210ENST00000621245 DDX28Q9NUL7 540 aaKnown RBP9.54□□□□□ -0.88
CPNE3-210ENST00000621245 UFSP2Q9NUQ7 469 aa9.54□□□□□ -0.88
CPNE3-210ENST00000621245 ARL8BQ9NVJ2 186 aa9.54□□□□□ -0.88
CPNE3-210ENST00000621245 VNN3Q9NY84 501 aa9.54□□□□□ -0.88
CPNE3-210ENST00000621245 CTSZQ9UBR2 303 aa9.54□□□□□ -0.88
CPNE3-210ENST00000621245 OR5V1Q9UGF6 321 aa9.54□□□□□ -0.88
CPNE3-210ENST00000621245 CD300AQ9UGN4 299 aa9.54□□□□□ -0.88
CPNE3-210ENST00000621245 CYB5R1Q9UHQ9 305 aa9.54□□□□□ -0.88
CPNE3-210ENST00000621245 SAMD4AQ9UPU9 718 aaKnown RBP9.54□□□□□ -0.88
CPNE3-210ENST00000621245 LRCH1Q9Y2L9 728 aa9.54□□□□□ -0.88
CPNE3-210ENST00000621245 SURF4O15260 269 aa9.53□□□□□ -0.88
CPNE3-210ENST00000621245 TMPRSS2O15393 492 aa9.53□□□□□ -0.88
CPNE3-210ENST00000621245 OR10H3O60404 316 aa9.53□□□□□ -0.88
CPNE3-210ENST00000621245 ATP6V1B2P21281 511 aa9.53□□□□□ -0.88
CPNE3-210ENST00000621245 TUBG1P23258 451 aa9.53□□□□□ -0.88
CPNE3-210ENST00000621245 PRTN3P24158 256 aa9.53□□□□□ -0.88
CPNE3-210ENST00000621245 CRABP1P29762 137 aa9.53□□□□□ -0.88
CPNE3-210ENST00000621245 SLC6A6P31641 620 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms