RNA–Protein interactions for RNA: ENST00000620675.4

NEK3-210, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-210ENST00000620675 FABP6P51161 128 aa11.72□□□□□ -0.53
NEK3-210ENST00000620675 TPTEP56180 551 aa11.72□□□□□ -0.53
NEK3-210ENST00000620675 PPP1CBP62140 327 aa11.72□□□□□ -0.53
NEK3-210ENST00000620675 GRB2P62993 217 aaKnown RBP11.72□□□□□ -0.53
NEK3-210ENST00000620675 SLC35A2P78381 396 aa11.72□□□□□ -0.53
NEK3-210ENST00000620675 GALEQ14376 348 aa11.72□□□□□ -0.53
NEK3-210ENST00000620675 CDONQ4KMG0 1287 aa11.72□□□□□ -0.53
NEK3-210ENST00000620675 LIPNQ5VXI9 398 aa11.72□□□□□ -0.53
NEK3-210ENST00000620675 KCTD18Q6PI47 426 aaPredicted RBP11.72□□□□□ -0.53
NEK3-210ENST00000620675 FAM57BQ71RH2 274 aa11.72□□□□□ -0.53
NEK3-210ENST00000620675 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.72□□□□□ -0.53
NEK3-210ENST00000620675 YIPF7Q8N8F6 280 aa11.72□□□□□ -0.53
NEK3-210ENST00000620675 NUP37Q8NFH4 326 aa11.72□□□□□ -0.53
NEK3-210ENST00000620675 SNX33Q8WV41 574 aa11.72□□□□□ -0.53
NEK3-210ENST00000620675 ASB17Q8WXJ9 295 aa11.72□□□□□ -0.53
NEK3-210ENST00000620675 SPTSSAQ969W0 71 aa11.72□□□□□ -0.53
NEK3-210ENST00000620675 C4orf36Q96KX1 117 aa11.72□□□□□ -0.53
NEK3-210ENST00000620675 FAM206AQ9NX38 181 aa11.72□□□□□ -0.53
NEK3-210ENST00000620675 DIMT1Q9UNQ2 313 aaKnown RBP11.72□□□□□ -0.53
NEK3-210ENST00000620675 ZNF469Q96JG9 3925 aaPredicted RBP11.71□□□□□ -0.53
NEK3-210ENST00000620675 J3QLW9 94 aa11.71□□□□□ -0.53
NEK3-210ENST00000620675 ANXA2P07355 339 aaKnown RBP11.71□□□□□ -0.53
NEK3-210ENST00000620675 PIPP12273 146 aaPredicted RBP11.71□□□□□ -0.53
NEK3-210ENST00000620675 ZNF19P17023 458 aa11.71□□□□□ -0.53
NEK3-210ENST00000620675 DCKP27707 260 aa11.71□□□□□ -0.53
NEK3-210ENST00000620675 EGR3Q06889 387 aa11.71□□□□□ -0.53
NEK3-210ENST00000620675 MED21Q13503 144 aa11.71□□□□□ -0.53
NEK3-210ENST00000620675 XAF1Q6GPH4 301 aa11.71□□□□□ -0.53
NEK3-210ENST00000620675 RHOUQ7L0Q8 258 aa11.71□□□□□ -0.53
NEK3-210ENST00000620675 RORBQ92753 470 aa11.71□□□□□ -0.53
NEK3-210ENST00000620675 MARS2Q96GW9 593 aaKnown RBP11.71□□□□□ -0.53
NEK3-210ENST00000620675 TMEM80Q96HE8 168 aa11.71□□□□□ -0.53
NEK3-210ENST00000620675 SIGLEC11Q96RL6 698 aa11.71□□□□□ -0.53
NEK3-210ENST00000620675 MNTQ99583 582 aa11.71□□□□□ -0.53
NEK3-210ENST00000620675 SYT3Q9BQG1 590 aa11.71□□□□□ -0.53
NEK3-210ENST00000620675 MRPL37Q9BZE1 423 aaKnown RBP11.71□□□□□ -0.53
NEK3-210ENST00000620675 Q9H521 79 aa11.71□□□□□ -0.53
NEK3-210ENST00000620675 DUSP21Q9H596 190 aa11.71□□□□□ -0.53
NEK3-210ENST00000620675 TBCCD1Q9NVR7 557 aa11.71□□□□□ -0.53
NEK3-210ENST00000620675 PTTG3PQ9NZH4 202 aa11.71□□□□□ -0.53
NEK3-210ENST00000620675 CNOT2Q9NZN8 540 aaKnown RBP11.71□□□□□ -0.53
NEK3-210ENST00000620675 CELSR1Q9NYQ6 3014 aa11.71□□□□□ -0.53
NEK3-210ENST00000620675 TMEM129A0AVI4 362 aa11.71□□□□□ -0.54
NEK3-210ENST00000620675 EFCAB10A6NFE3 127 aa11.71□□□□□ -0.54
NEK3-210ENST00000620675 METTL15A6NJ78 407 aa11.71□□□□□ -0.54
NEK3-210ENST00000620675 H3BSH0 61 aa11.71□□□□□ -0.54
NEK3-210ENST00000620675 LALBAP00709 142 aa11.71□□□□□ -0.54
NEK3-210ENST00000620675 CD8AP01732 235 aa11.71□□□□□ -0.54
NEK3-210ENST00000620675 OR4A8P0C604 315 aa11.71□□□□□ -0.54
NEK3-210ENST00000620675 CCDC159P0C7I6 412 aa11.71□□□□□ -0.54
NEK3-210ENST00000620675 DANCRP0C864 163 aa11.71□□□□□ -0.54
NEK3-210ENST00000620675 SSTR2P30874 369 aa11.71□□□□□ -0.54
NEK3-210ENST00000620675 GLRXP35754 106 aa11.71□□□□□ -0.54
NEK3-210ENST00000620675 RIDAP52758 137 aaKnown RBP11.71□□□□□ -0.54
NEK3-210ENST00000620675 PSMA6P60900 246 aaKnown RBP11.71□□□□□ -0.54
NEK3-210ENST00000620675 ACTC1P68032 377 aa11.71□□□□□ -0.54
NEK3-210ENST00000620675 ACTA1P68133 377 aa11.71□□□□□ -0.54
NEK3-210ENST00000620675 MST1LQ2TV78 715 aa11.71□□□□□ -0.54
NEK3-210ENST00000620675 DRAM2Q6UX65 266 aa11.71□□□□□ -0.54
NEK3-210ENST00000620675 OR8B12Q8NGG6 310 aa11.71□□□□□ -0.54
NEK3-210ENST00000620675 IPCEF1Q8WWN9 437 aaPredicted RBP11.71□□□□□ -0.54
NEK3-210ENST00000620675 GTF3AQ92664 365 aaKnown RBP11.71□□□□□ -0.54
NEK3-210ENST00000620675 FBXW5Q969U6 566 aa11.71□□□□□ -0.54
NEK3-210ENST00000620675 PELI1Q96FA3 418 aa11.71□□□□□ -0.54
NEK3-210ENST00000620675 EIF3KQ9UBQ5 218 aaKnown RBP11.71□□□□□ -0.54
NEK3-210ENST00000620675 SLC22A13Q9Y226 551 aa11.71□□□□□ -0.54
NEK3-210ENST00000620675 TMEM269A0A1B0GVZ9 245 aa11.7□□□□□ -0.54
NEK3-210ENST00000620675 PHYHO14832 338 aa11.7□□□□□ -0.54
NEK3-210ENST00000620675 LILRA1O75019 489 aa11.7□□□□□ -0.54
NEK3-210ENST00000620675 MT-ND2P03891 347 aa11.7□□□□□ -0.54
NEK3-210ENST00000620675 KRT8P05787 483 aa11.7□□□□□ -0.54
NEK3-210ENST00000620675 CDK1P06493 297 aa11.7□□□□□ -0.54
NEK3-210ENST00000620675 GTF2A1P52655 376 aaPredicted RBP11.7□□□□□ -0.54
NEK3-210ENST00000620675 CDH15P55291 814 aa11.7□□□□□ -0.54
NEK3-210ENST00000620675 NANOS3P60323 173 aaKnown RBP11.7□□□□□ -0.54
NEK3-210ENST00000620675 ZNF92Q03936 586 aa11.7□□□□□ -0.54
NEK3-210ENST00000620675 ODF4Q2M2E3 257 aa11.7□□□□□ -0.54
NEK3-210ENST00000620675 GFOD2Q3B7J2 385 aa11.7□□□□□ -0.54
NEK3-210ENST00000620675 GLYATL3Q5SZD4 288 aa11.7□□□□□ -0.54
NEK3-210ENST00000620675 DEGS2Q6QHC5 323 aa11.7□□□□□ -0.54
NEK3-210ENST00000620675 STX19Q8N4C7 294 aa11.7□□□□□ -0.54
NEK3-210ENST00000620675 KLF14Q8TD94 323 aaPredicted RBP11.7□□□□□ -0.54
NEK3-210ENST00000620675 DHRS9Q9BPW9 319 aa11.7□□□□□ -0.54
NEK3-210ENST00000620675 JAM3Q9BX67 310 aa11.7□□□□□ -0.54
NEK3-210ENST00000620675 G6PC2Q9NQR9 355 aa11.7□□□□□ -0.54
NEK3-210ENST00000620675 GTF2A1LQ9UNN4 478 aa11.7□□□□□ -0.54
NEK3-210ENST00000620675 PCDHGB1Q9Y5G3 927 aa11.7□□□□□ -0.54
NEK3-210ENST00000620675 TBX1O43435 398 aa11.69□□□□□ -0.54
NEK3-210ENST00000620675 TTKP33981 857 aa11.69□□□□□ -0.54
NEK3-210ENST00000620675 RAD52P43351 418 aa11.69□□□□□ -0.54
NEK3-210ENST00000620675 GK2Q14410 553 aaPredicted RBP11.69□□□□□ -0.54
NEK3-210ENST00000620675 RGS7BPQ6MZT1 257 aaPredicted RBP11.69□□□□□ -0.54
NEK3-210ENST00000620675 ZCCHC24Q8N2G6 241 aaKnown RBP11.69□□□□□ -0.54
NEK3-210ENST00000620675 PRSS35Q8N3Z0 413 aa11.69□□□□□ -0.54
NEK3-210ENST00000620675 ZNF485Q8NCK3 441 aa11.69□□□□□ -0.54
NEK3-210ENST00000620675 SPRYD4Q8WW59 207 aaPredicted RBP11.69□□□□□ -0.54
NEK3-210ENST00000620675 APOBEC3DQ96AK3 386 aaPredicted RBP11.69□□□□□ -0.54
NEK3-210ENST00000620675 LYZL4Q96KX0 146 aa11.69□□□□□ -0.54
NEK3-210ENST00000620675 DCLRE1CQ96SD1 692 aaKnown RBP11.69□□□□□ -0.54
NEK3-210ENST00000620675 BCL2L14Q9BZR8 327 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms