RNA–Protein interactions for RNA: ENST00000620394.1

SRRT-218, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-218ENST00000620394 CDH10Q9Y6N8 788 aa18.48■□□□□ 0.55
SRRT-218ENST00000620394 CEACAM18A8MTB9 384 aa18.47■□□□□ 0.55
SRRT-218ENST00000620394 SELEP16581 610 aa18.47■□□□□ 0.55
SRRT-218ENST00000620394 GATA4P43694 442 aa18.47■□□□□ 0.55
SRRT-218ENST00000620394 RPL13AP3Q6NVV1 102 aa18.47■□□□□ 0.55
SRRT-218ENST00000620394 ZDHHC21Q8IVQ6 265 aa18.47■□□□□ 0.55
SRRT-218ENST00000620394 GNPDA2Q8TDQ7 276 aa18.47■□□□□ 0.55
SRRT-218ENST00000620394 DDOQ99489 341 aa18.47■□□□□ 0.55
SRRT-218ENST00000620394 ARL2BPQ9Y2Y0 163 aa18.47■□□□□ 0.55
SRRT-218ENST00000620394 LYVE1Q9Y5Y7 322 aa18.47■□□□□ 0.55
SRRT-218ENST00000620394 POM121CA8CG34 1229 aa18.46■□□□□ 0.55
SRRT-218ENST00000620394 H0YL77 283 aa18.46■□□□□ 0.55
SRRT-218ENST00000620394 BHLHE40O14503 412 aa18.46■□□□□ 0.55
SRRT-218ENST00000620394 KRT36O76013 467 aa18.46■□□□□ 0.55
SRRT-218ENST00000620394 MAGEA2P43356 314 aa18.46■□□□□ 0.55
SRRT-218ENST00000620394 KHDRBS1Q07666 443 aaKnown RBP eCLIP18.46■□□□□ 0.55
SRRT-218ENST00000620394 TRAP1Q12931 704 aaKnown RBP18.46■□□□□ 0.55
SRRT-218ENST00000620394 GK2Q14410 553 aaPredicted RBP18.46■□□□□ 0.55
SRRT-218ENST00000620394 ESCO2Q56NI9 601 aa18.46■□□□□ 0.55
SRRT-218ENST00000620394 C16orf89Q6UX73 402 aa18.46■□□□□ 0.55
SRRT-218ENST00000620394 PIGWQ7Z7B1 504 aa18.46■□□□□ 0.55
SRRT-218ENST00000620394 DEFB107AQ8IZN7 70 aa18.46■□□□□ 0.55
SRRT-218ENST00000620394 OR52E2Q8NGJ4 325 aa18.46■□□□□ 0.55
SRRT-218ENST00000620394 PITX2Q99697 317 aa18.46■□□□□ 0.55
SRRT-218ENST00000620394 BTBD10Q9BSF8 475 aa18.46■□□□□ 0.55
SRRT-218ENST00000620394 HCAR1Q9BXC0 346 aa18.46■□□□□ 0.55
SRRT-218ENST00000620394 RNASE1P07998 156 aaKnown RBP18.45■□□□□ 0.54
SRRT-218ENST00000620394 WNT2P09544 360 aa18.45■□□□□ 0.54
SRRT-218ENST00000620394 PAX2Q02962 417 aa18.45■□□□□ 0.54
SRRT-218ENST00000620394 ZNF770Q6IQ21 691 aaPredicted RBP18.45■□□□□ 0.54
SRRT-218ENST00000620394 CELF2-AS1Q8N7Q2 184 aa18.45■□□□□ 0.54
SRRT-218ENST00000620394 BHLHE23Q8NDY6 225 aa18.45■□□□□ 0.54
SRRT-218ENST00000620394 OR52L1Q8NGH7 329 aa18.45■□□□□ 0.54
SRRT-218ENST00000620394 OR2AJ1Q8NGZ0 328 aa18.45■□□□□ 0.54
SRRT-218ENST00000620394 ZNF420Q8TAQ5 688 aaPredicted RBP18.45■□□□□ 0.54
SRRT-218ENST00000620394 DACT3Q96B18 629 aaPredicted RBP18.45■□□□□ 0.54
SRRT-218ENST00000620394 MAP6Q96JE9 813 aa18.45■□□□□ 0.54
SRRT-218ENST00000620394 SLITRK2Q9H156 845 aa18.45■□□□□ 0.54
SRRT-218ENST00000620394 EGLN3Q9H6Z9 239 aa18.45■□□□□ 0.54
SRRT-218ENST00000620394 WDR76Q9H967 626 aa18.45■□□□□ 0.54
SRRT-218ENST00000620394 IL20Q9NYY1 176 aa18.45■□□□□ 0.54
SRRT-218ENST00000620394 NUP50Q9UKX7 468 aa18.45■□□□□ 0.54
SRRT-218ENST00000620394 AUP1Q9Y679 476 aa18.45■□□□□ 0.54
SRRT-218ENST00000620394 F5H5K5 113 aa18.44■□□□□ 0.54
SRRT-218ENST00000620394 F5H5P2 479 aa18.44■□□□□ 0.54
SRRT-218ENST00000620394 DCTN3O75935 186 aa18.44■□□□□ 0.54
SRRT-218ENST00000620394 ATP6V1B2P21281 511 aa18.44■□□□□ 0.54
SRRT-218ENST00000620394 OTX1P32242 354 aaPredicted RBP18.44■□□□□ 0.54
SRRT-218ENST00000620394 KLF17Q5JT82 389 aaPredicted RBP18.44■□□□□ 0.54
SRRT-218ENST00000620394 LINC00471Q8N535 108 aa18.44■□□□□ 0.54
SRRT-218ENST00000620394 OR9Q2Q8NGE9 314 aa18.44■□□□□ 0.54
SRRT-218ENST00000620394 OR4C15Q8NGM1 316 aa18.44■□□□□ 0.54
SRRT-218ENST00000620394 OR10S1Q8NGN2 331 aa18.44■□□□□ 0.54
SRRT-218ENST00000620394 Q8TCH9 128 aa18.44■□□□□ 0.54
SRRT-218ENST00000620394 SLC25A28Q96A46 364 aa18.44■□□□□ 0.54
SRRT-218ENST00000620394 DUX5Q96PT3 197 aa18.44■□□□□ 0.54
SRRT-218ENST00000620394 TRIM15Q9C019 465 aa18.44■□□□□ 0.54
SRRT-218ENST00000620394 TMEM165Q9HC07 324 aa18.44■□□□□ 0.54
SRRT-218ENST00000620394 TMEM100Q9NV29 134 aa18.44■□□□□ 0.54
SRRT-218ENST00000620394 ACTR3BQ9P1U1 418 aa18.44■□□□□ 0.54
SRRT-218ENST00000620394 OR5V1Q9UGF6 321 aa18.44■□□□□ 0.54
SRRT-218ENST00000620394 CLDN34H7C241 214 aa18.43■□□□□ 0.54
SRRT-218ENST00000620394 CYB5R3P00387 301 aaPredicted RBP18.43■□□□□ 0.54
SRRT-218ENST00000620394 HLA-DQA2P01906 255 aa18.43■□□□□ 0.54
SRRT-218ENST00000620394 PPIAL4GP0DN37 164 aa18.43■□□□□ 0.54
SRRT-218ENST00000620394 RAD23AP54725 363 aa18.43■□□□□ 0.54
SRRT-218ENST00000620394 PAX8Q06710 450 aa18.43■□□□□ 0.54
SRRT-218ENST00000620394 BAMBIQ13145 260 aa18.43■□□□□ 0.54
SRRT-218ENST00000620394 ZNF404Q494X3 552 aa18.43■□□□□ 0.54
SRRT-218ENST00000620394 CLEC12AQ5QGZ9 265 aa18.43■□□□□ 0.54
SRRT-218ENST00000620394 ZNF362Q5T0B9 420 aaPredicted RBP18.43■□□□□ 0.54
SRRT-218ENST00000620394 SLC35F1Q5T1Q4 408 aa18.43■□□□□ 0.54
SRRT-218ENST00000620394 MOGAT3Q86VF5 341 aa18.43■□□□□ 0.54
SRRT-218ENST00000620394 C1orf87Q8N0U7 546 aa18.43■□□□□ 0.54
SRRT-218ENST00000620394 OR8D4Q8NGM9 314 aa18.43■□□□□ 0.54
SRRT-218ENST00000620394 C1orf147Q96MC9 270 aaPredicted RBP18.43■□□□□ 0.54
SRRT-218ENST00000620394 MRI1Q9BV20 369 aa18.43■□□□□ 0.54
SRRT-218ENST00000620394 CDADC1Q9BWV3 514 aa18.43■□□□□ 0.54
SRRT-218ENST00000620394 SSBP3Q9BWW4 388 aaPredicted RBP18.43■□□□□ 0.54
SRRT-218ENST00000620394 LRRC30A6NM36 301 aa18.42■□□□□ 0.54
SRRT-218ENST00000620394 M0R135 149 aa18.42■□□□□ 0.54
SRRT-218ENST00000620394 RPS2P15880 293 aaKnown RBP18.42■□□□□ 0.54
SRRT-218ENST00000620394 PMELP40967 661 aa18.42■□□□□ 0.54
SRRT-218ENST00000620394 CD200P41217 278 aa18.42■□□□□ 0.54
SRRT-218ENST00000620394 TPTEP56180 551 aa18.42■□□□□ 0.54
SRRT-218ENST00000620394 GNGT1P63211 74 aa18.42■□□□□ 0.54
SRRT-218ENST00000620394 MALLQ13021 153 aa18.42■□□□□ 0.54
SRRT-218ENST00000620394 MAB21L1Q13394 359 aa18.42■□□□□ 0.54
SRRT-218ENST00000620394 OCLNQ16625 522 aa18.42■□□□□ 0.54
SRRT-218ENST00000620394 RASSF6Q6ZTQ3 369 aa18.42■□□□□ 0.54
SRRT-218ENST00000620394 NAA40Q86UY6 237 aa18.42■□□□□ 0.54
SRRT-218ENST00000620394 KLBQ86Z14 1044 aa18.42■□□□□ 0.54
SRRT-218ENST00000620394 OR2T4Q8NH00 348 aa18.42■□□□□ 0.54
SRRT-218ENST00000620394 ERGIC1Q969X5 290 aa18.42■□□□□ 0.54
SRRT-218ENST00000620394 ZNF799Q96GE5 643 aa18.42■□□□□ 0.54
SRRT-218ENST00000620394 TMEM246Q9BRR3 403 aa18.42■□□□□ 0.54
SRRT-218ENST00000620394 ZNF69Q9UC07 566 aa18.42■□□□□ 0.54
SRRT-218ENST00000620394 MIOXQ9UGB7 285 aa18.42■□□□□ 0.54
SRRT-218ENST00000620394 TCRBV5S2A0A599 114 aa18.41■□□□□ 0.54
SRRT-218ENST00000620394 TNFRSF11BO00300 401 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms