RNA–Protein interactions for RNA: ENST00000600320.5

SHKBP1-222, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-222ENST00000600320 PLEKHF2Q9H8W4 249 aa17.22■□□□□ 0.35
SHKBP1-222ENST00000600320 CA10Q9NS85 328 aa17.22■□□□□ 0.35
SHKBP1-222ENST00000600320 ACOXLQ9NUZ1 547 aa17.22■□□□□ 0.35
SHKBP1-222ENST00000600320 FAM206AQ9NX38 181 aa17.22■□□□□ 0.35
SHKBP1-222ENST00000600320 GNG8Q9UK08 70 aa17.22■□□□□ 0.35
SHKBP1-222ENST00000600320 FZR1Q9UM11 496 aa17.22■□□□□ 0.35
SHKBP1-222ENST00000600320 RAI1Q7Z5J4 1906 aaPredicted RBP17.21■□□□□ 0.35
SHKBP1-222ENST00000600320 J3QLW9 94 aa17.21■□□□□ 0.35
SHKBP1-222ENST00000600320 HS3ST1O14792 307 aa17.21■□□□□ 0.35
SHKBP1-222ENST00000600320 RPP14O95059 124 aaKnown RBP17.21■□□□□ 0.35
SHKBP1-222ENST00000600320 ANXA2P07355 339 aaKnown RBP17.21■□□□□ 0.35
SHKBP1-222ENST00000600320 ZNF19P17023 458 aa17.21■□□□□ 0.35
SHKBP1-222ENST00000600320 DCTDP32321 178 aa17.21■□□□□ 0.35
SHKBP1-222ENST00000600320 PSMB10P40306 273 aa17.21■□□□□ 0.35
SHKBP1-222ENST00000600320 RAD52P43351 418 aa17.21■□□□□ 0.35
SHKBP1-222ENST00000600320 RGS6P49758 472 aa17.21■□□□□ 0.35
SHKBP1-222ENST00000600320 ADIPOQQ15848 244 aa17.21■□□□□ 0.35
SHKBP1-222ENST00000600320 ARL9Q6T311 187 aa17.21■□□□□ 0.35
SHKBP1-222ENST00000600320 SPRYD4Q8WW59 207 aaPredicted RBP17.21■□□□□ 0.35
SHKBP1-222ENST00000600320 IPCEF1Q8WWN9 437 aaPredicted RBP17.21■□□□□ 0.35
SHKBP1-222ENST00000600320 PPP1R14AQ96A00 147 aa17.21■□□□□ 0.35
SHKBP1-222ENST00000600320 BCL2L14Q9BZR8 327 aa17.21■□□□□ 0.35
SHKBP1-222ENST00000600320 OR2J1Q9GZK6 312 aa17.21■□□□□ 0.35
SHKBP1-222ENST00000600320 ZNF442Q9H7R0 627 aa17.21■□□□□ 0.35
SHKBP1-222ENST00000600320 UBTD1Q9HAC8 227 aa17.21■□□□□ 0.35
SHKBP1-222ENST00000600320 PTTG3PQ9NZH4 202 aa17.21■□□□□ 0.35
SHKBP1-222ENST00000600320 ROS1P08922 2347 aa17.21■□□□□ 0.35
SHKBP1-222ENST00000600320 HTR1AP08908 422 aa17.2■□□□□ 0.34
SHKBP1-222ENST00000600320 MYL12AP19105 171 aa17.2■□□□□ 0.34
SHKBP1-222ENST00000600320 DOC2BQ14184 412 aa17.2■□□□□ 0.34
SHKBP1-222ENST00000600320 TMEM255AQ5JRV8 349 aa17.2■□□□□ 0.34
SHKBP1-222ENST00000600320 RGS7BPQ6MZT1 257 aaPredicted RBP17.2■□□□□ 0.34
SHKBP1-222ENST00000600320 SYS1Q8N2H4 156 aa17.2■□□□□ 0.34
SHKBP1-222ENST00000600320 RORBQ92753 470 aa17.2■□□□□ 0.34
SHKBP1-222ENST00000600320 MYDGFQ969H8 173 aa17.2■□□□□ 0.34
SHKBP1-222ENST00000600320 PELI1Q96FA3 418 aa17.2■□□□□ 0.34
SHKBP1-222ENST00000600320 MARS2Q96GW9 593 aaKnown RBP17.2■□□□□ 0.34
SHKBP1-222ENST00000600320 DHRS9Q9BPW9 319 aa17.2■□□□□ 0.34
SHKBP1-222ENST00000600320 R4GMQ9 66 aa17.2■□□□□ 0.34
SHKBP1-222ENST00000600320 PLCE1Q9P212 2302 aa17.19■□□□□ 0.34
SHKBP1-222ENST00000600320 TMEM269A0A1B0GVZ9 245 aa17.19■□□□□ 0.34
SHKBP1-222ENST00000600320 E9PI62 339 aa17.19■□□□□ 0.34
SHKBP1-222ENST00000600320 APOC1P02654 83 aa17.19■□□□□ 0.34
SHKBP1-222ENST00000600320 MT-ND2P03891 347 aa17.19■□□□□ 0.34
SHKBP1-222ENST00000600320 MPV17P39210 176 aa17.19■□□□□ 0.34
SHKBP1-222ENST00000600320 FABP6P51161 128 aa17.19■□□□□ 0.34
SHKBP1-222ENST00000600320 PRSS12P56730 875 aa17.19■□□□□ 0.34
SHKBP1-222ENST00000600320 ACTA2P62736 377 aa17.19■□□□□ 0.34
SHKBP1-222ENST00000600320 ACTG2P63267 376 aa17.19■□□□□ 0.34
SHKBP1-222ENST00000600320 IRF3Q14653 427 aa17.19■□□□□ 0.34
SHKBP1-222ENST00000600320 ZNF829Q3KNS6 432 aaPredicted RBP17.19■□□□□ 0.34
SHKBP1-222ENST00000600320 GLYATL3Q5SZD4 288 aa17.19■□□□□ 0.34
SHKBP1-222ENST00000600320 FAM220AQ7Z4H9 259 aa17.19■□□□□ 0.34
SHKBP1-222ENST00000600320 LRP11Q86VZ4 500 aa17.19■□□□□ 0.34
SHKBP1-222ENST00000600320 OR8B12Q8NGG6 310 aa17.19■□□□□ 0.34
SHKBP1-222ENST00000600320 OR2AE1Q8NHA4 323 aa17.19■□□□□ 0.34
SHKBP1-222ENST00000600320 NRGNQ92686 78 aa17.19■□□□□ 0.34
SHKBP1-222ENST00000600320 FBXW5Q969U6 566 aa17.19■□□□□ 0.34
SHKBP1-222ENST00000600320 PGAM5Q96HS1 289 aa17.19■□□□□ 0.34
SHKBP1-222ENST00000600320 G6PC2Q9NQR9 355 aa17.19■□□□□ 0.34
SHKBP1-222ENST00000600320 LRCH1Q9Y2L9 728 aa17.19■□□□□ 0.34
SHKBP1-222ENST00000600320 CAB39Q9Y376 341 aaPredicted RBP17.19■□□□□ 0.34
SHKBP1-222ENST00000600320 LOC110117498-PIK3R3F6TDL0 507 aa17.18■□□□□ 0.34
SHKBP1-222ENST00000600320 J3QW42 95 aa17.18■□□□□ 0.34
SHKBP1-222ENST00000600320 TBX1O43435 398 aa17.18■□□□□ 0.34
SHKBP1-222ENST00000600320 RGS10O43665 173 aa17.18■□□□□ 0.34
SHKBP1-222ENST00000600320 CLPTM1O96005 669 aa17.18■□□□□ 0.34
SHKBP1-222ENST00000600320 OR4A8P0C604 315 aa17.18■□□□□ 0.34
SHKBP1-222ENST00000600320 APOBEC3AP31941 199 aaPredicted RBP17.18■□□□□ 0.34
SHKBP1-222ENST00000600320 MMP16P51512 607 aa17.18■□□□□ 0.34
SHKBP1-222ENST00000600320 RPS23P62266 143 aaKnown RBP17.18■□□□□ 0.34
SHKBP1-222ENST00000600320 HLXQ14774 488 aaPredicted RBP17.18■□□□□ 0.34
SHKBP1-222ENST00000600320 ZNF544Q6NX49 715 aa17.18■□□□□ 0.34
SHKBP1-222ENST00000600320 KCTD20Q7Z5Y7 419 aa17.18■□□□□ 0.34
SHKBP1-222ENST00000600320 KLHL36Q8N4N3 616 aa17.18■□□□□ 0.34
SHKBP1-222ENST00000600320 ZNF611Q8N823 705 aa17.18■□□□□ 0.34
SHKBP1-222ENST00000600320 ZNF485Q8NCK3 441 aa17.18■□□□□ 0.34
SHKBP1-222ENST00000600320 KLF14Q8TD94 323 aaPredicted RBP17.18■□□□□ 0.34
SHKBP1-222ENST00000600320 MRPL24Q96A35 216 aaKnown RBP17.18■□□□□ 0.34
SHKBP1-222ENST00000600320 SGK3Q96BR1 496 aa17.18■□□□□ 0.34
SHKBP1-222ENST00000600320 SYT3Q9BQG1 590 aa17.18■□□□□ 0.34
SHKBP1-222ENST00000600320 YTHDF1Q9BYJ9 559 aaKnown RBP17.18■□□□□ 0.34
SHKBP1-222ENST00000600320 MRPL37Q9BZE1 423 aaKnown RBP17.18■□□□□ 0.34
SHKBP1-222ENST00000600320 PBOV1Q9GZY1 135 aa17.18■□□□□ 0.34
SHKBP1-222ENST00000600320 MYEF2Q9P2K5 600 aaKnown RBP17.18■□□□□ 0.34
SHKBP1-222ENST00000600320 BLOC1S6Q9UL45 172 aa17.18■□□□□ 0.34
SHKBP1-222ENST00000600320 SLC22A13Q9Y226 551 aa17.18■□□□□ 0.34
SHKBP1-222ENST00000600320 CMAHPQ9Y471 501 aa17.18■□□□□ 0.34
SHKBP1-222ENST00000600320 TMEM129A0AVI4 362 aa17.17■□□□□ 0.34
SHKBP1-222ENST00000600320 TTKP33981 857 aa17.17■□□□□ 0.34
SHKBP1-222ENST00000600320 CDH15P55291 814 aa17.17■□□□□ 0.34
SHKBP1-222ENST00000600320 GABARAPL2P60520 117 aa17.17■□□□□ 0.34
SHKBP1-222ENST00000600320 ZNF92Q03936 586 aa17.17■□□□□ 0.34
SHKBP1-222ENST00000600320 MST1LQ2TV78 715 aa17.17■□□□□ 0.34
SHKBP1-222ENST00000600320 RNLSQ5VYX0 342 aa17.17■□□□□ 0.34
SHKBP1-222ENST00000600320 UNQ6126/PRO20091Q6UXV3 157 aa17.17■□□□□ 0.34
SHKBP1-222ENST00000600320 CATSPERDQ86XM0 798 aa17.17■□□□□ 0.34
SHKBP1-222ENST00000600320 OR52N1Q8NH53 320 aa17.17■□□□□ 0.34
SHKBP1-222ENST00000600320 MRPL48Q96GC5 212 aaKnown RBP17.17■□□□□ 0.34
SHKBP1-222ENST00000600320 SOX7Q9BT81 388 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms