RNA–Protein interactions for RNA: ENST00000600137.5

VRK3-219, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 822 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-219ENST00000600137 LAMP5Q9UJQ1 280 aa11.75□□□□□ -0.53
VRK3-219ENST00000600137 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.75□□□□□ -0.53
VRK3-219ENST00000600137 A0A1W2PQL4 384 aaPredicted RBP11.74□□□□□ -0.53
VRK3-219ENST00000600137 PSMD9O00233 223 aa11.74□□□□□ -0.53
VRK3-219ENST00000600137 LCATP04180 440 aa11.74□□□□□ -0.53
VRK3-219ENST00000600137 OR2T7P0C7T2 308 aa11.74□□□□□ -0.53
VRK3-219ENST00000600137 SLC2A1P11166 492 aa11.74□□□□□ -0.53
VRK3-219ENST00000600137 DBTP11182 482 aaKnown RBP11.74□□□□□ -0.53
VRK3-219ENST00000600137 KITLGP21583 273 aa11.74□□□□□ -0.53
VRK3-219ENST00000600137 ALDH3B1P43353 468 aa11.74□□□□□ -0.53
VRK3-219ENST00000600137 SLC15A1P46059 708 aa11.74□□□□□ -0.53
VRK3-219ENST00000600137 PPOXP50336 477 aa11.74□□□□□ -0.53
VRK3-219ENST00000600137 ART1P52961 327 aa11.74□□□□□ -0.53
VRK3-219ENST00000600137 KLF3P57682 345 aaPredicted RBP11.74□□□□□ -0.53
VRK3-219ENST00000600137 CXCR4P61073 352 aa11.74□□□□□ -0.53
VRK3-219ENST00000600137 ZNF85Q03923 595 aa11.74□□□□□ -0.53
VRK3-219ENST00000600137 POU4F2Q12837 409 aa11.74□□□□□ -0.53
VRK3-219ENST00000600137 CDK5R2Q13319 367 aa11.74□□□□□ -0.53
VRK3-219ENST00000600137 IL18R1Q13478 541 aa11.74□□□□□ -0.53
VRK3-219ENST00000600137 GK2Q14410 553 aaPredicted RBP11.74□□□□□ -0.53
VRK3-219ENST00000600137 UNQ6126/PRO20091Q6UXV3 157 aa11.74□□□□□ -0.53
VRK3-219ENST00000600137 DNM1P46Q6ZS02 220 aa11.74□□□□□ -0.53
VRK3-219ENST00000600137 ZNF679Q8IYX0 411 aa11.74□□□□□ -0.53
VRK3-219ENST00000600137 OR2T27Q8NH04 317 aa11.74□□□□□ -0.53
VRK3-219ENST00000600137 CNIH3Q8TBE1 160 aa11.74□□□□□ -0.53
VRK3-219ENST00000600137 GTF3AQ92664 365 aaKnown RBP11.74□□□□□ -0.53
VRK3-219ENST00000600137 CMBLQ96DG6 245 aa11.74□□□□□ -0.53
VRK3-219ENST00000600137 RNFT2Q96EX2 444 aa11.74□□□□□ -0.53
VRK3-219ENST00000600137 SORCS2Q96PQ0 1159 aa11.74□□□□□ -0.53
VRK3-219ENST00000600137 APOL4Q9BPW4 351 aa11.74□□□□□ -0.53
VRK3-219ENST00000600137 PTTG3PQ9NZH4 202 aa11.74□□□□□ -0.53
VRK3-219ENST00000600137 TAAR3PQ9P1P4 343 aa11.74□□□□□ -0.53
VRK3-219ENST00000600137 MRM2Q9UI43 246 aaKnown RBP11.74□□□□□ -0.53
VRK3-219ENST00000600137 LRP12Q9Y561 859 aa11.74□□□□□ -0.53
VRK3-219ENST00000600137 TMEM14AQ9Y6G1 99 aa11.74□□□□□ -0.53
VRK3-219ENST00000600137 HSPE1-MOB4S4R3N1 261 aa11.74□□□□□ -0.53
VRK3-219ENST00000600137 PMF1-BGLAPU3KQ54 211 aa11.74□□□□□ -0.53
VRK3-219ENST00000600137 LILRA1O75019 489 aa11.73□□□□□ -0.53
VRK3-219ENST00000600137 PNPP00491 289 aa11.73□□□□□ -0.53
VRK3-219ENST00000600137 H2BFMP0C1H6 154 aa11.73□□□□□ -0.53
VRK3-219ENST00000600137 RAC2P15153 192 aa11.73□□□□□ -0.53
VRK3-219ENST00000600137 DCTDP32321 178 aa11.73□□□□□ -0.53
VRK3-219ENST00000600137 CX3CR1P49238 355 aa11.73□□□□□ -0.53
VRK3-219ENST00000600137 ZNF121P58317 390 aaPredicted RBP11.73□□□□□ -0.53
VRK3-219ENST00000600137 SNRPD2P62316 118 aaKnown RBP11.73□□□□□ -0.53
VRK3-219ENST00000600137 IL5RAQ01344 420 aa11.73□□□□□ -0.53
VRK3-219ENST00000600137 ZNF92Q03936 586 aa11.73□□□□□ -0.53
VRK3-219ENST00000600137 TAF13Q15543 124 aa11.73□□□□□ -0.53
VRK3-219ENST00000600137 C6orf52Q5T4I8 152 aa11.73□□□□□ -0.53
VRK3-219ENST00000600137 KCTD18Q6PI47 426 aaPredicted RBP11.73□□□□□ -0.53
VRK3-219ENST00000600137 ZNF322Q6U7Q0 402 aaPredicted RBP11.73□□□□□ -0.53
VRK3-219ENST00000600137 Q6ZR03 302 aa11.73□□□□□ -0.53
VRK3-219ENST00000600137 ZNF283Q8N7M2 679 aa11.73□□□□□ -0.53
VRK3-219ENST00000600137 ASB17Q8WXJ9 295 aa11.73□□□□□ -0.53
VRK3-219ENST00000600137 PPP1R14AQ96A00 147 aa11.73□□□□□ -0.53
VRK3-219ENST00000600137 SPSB4Q96A44 273 aa11.73□□□□□ -0.53
VRK3-219ENST00000600137 SGK3Q96BR1 496 aa11.73□□□□□ -0.53
VRK3-219ENST00000600137 PERPQ96FX8 193 aa11.73□□□□□ -0.53
VRK3-219ENST00000600137 Q96MT0 163 aa11.73□□□□□ -0.53
VRK3-219ENST00000600137 COG8Q96MW5 612 aa11.73□□□□□ -0.53
VRK3-219ENST00000600137 TBX5Q99593 518 aa11.73□□□□□ -0.53
VRK3-219ENST00000600137 REPIN1Q9BWE0 567 aaKnown RBP11.73□□□□□ -0.53
VRK3-219ENST00000600137 TTTY10Q9BZA0 68 aa11.73□□□□□ -0.53
VRK3-219ENST00000600137 PURGQ9UJV8 347 aaKnown RBP11.73□□□□□ -0.53
VRK3-219ENST00000600137 ITGB1BP2Q9UKP3 347 aa11.73□□□□□ -0.53
VRK3-219ENST00000600137 MYRFQ9Y2G1 1151 aa11.73□□□□□ -0.53
VRK3-219ENST00000600137 A0A1B0GWJ7 208 aa11.72□□□□□ -0.53
VRK3-219ENST00000600137 ZNF670-ZNF695F2Z2N8 137 aa11.72□□□□□ -0.53
VRK3-219ENST00000600137 ZNF254O75437 659 aa11.72□□□□□ -0.53
VRK3-219ENST00000600137 LY6HO94772 140 aa11.72□□□□□ -0.53
VRK3-219ENST00000600137 IGHA1P01876 353 aa11.72□□□□□ -0.53
VRK3-219ENST00000600137 NAT2P11245 290 aa11.72□□□□□ -0.53
VRK3-219ENST00000600137 GCH1P30793 250 aa11.72□□□□□ -0.53
VRK3-219ENST00000600137 ATP5J2P56134 94 aa11.72□□□□□ -0.53
VRK3-219ENST00000600137 PRSS12P56730 875 aa11.72□□□□□ -0.53
VRK3-219ENST00000600137 EGR3Q06889 387 aa11.72□□□□□ -0.53
VRK3-219ENST00000600137 TNK1Q13470 666 aa11.72□□□□□ -0.53
VRK3-219ENST00000600137 GLYATL3Q5SZD4 288 aa11.72□□□□□ -0.53
VRK3-219ENST00000600137 KRT77Q7Z794 578 aa11.72□□□□□ -0.53
VRK3-219ENST00000600137 OR5L1Q8NGL2 311 aa11.72□□□□□ -0.53
VRK3-219ENST00000600137 OR2AE1Q8NHA4 323 aa11.72□□□□□ -0.53
VRK3-219ENST00000600137 NIPAL2Q9H841 368 aa11.72□□□□□ -0.53
VRK3-219ENST00000600137 FAM206AQ9NX38 181 aa11.72□□□□□ -0.53
VRK3-219ENST00000600137 ZANQ9Y493 2812 aa11.72□□□□□ -0.53
VRK3-219ENST00000600137 FLNAP21333 2647 aaKnown RBP11.72□□□□□ -0.53
VRK3-219ENST00000600137 ACANP16112 2415 aa11.71□□□□□ -0.53
VRK3-219ENST00000600137 ZSCAN5BA6NJL1 495 aa11.71□□□□□ -0.53
VRK3-219ENST00000600137 C17orf100A8MU93 164 aa11.71□□□□□ -0.53
VRK3-219ENST00000600137 M0R233 179 aa11.71□□□□□ -0.53
VRK3-219ENST00000600137 PHYHO14832 338 aa11.71□□□□□ -0.53
VRK3-219ENST00000600137 F12P00748 615 aaPredicted RBP11.71□□□□□ -0.53
VRK3-219ENST00000600137 IGLV3-1P01715 115 aa11.71□□□□□ -0.53
VRK3-219ENST00000600137 ADH4P08319 380 aa11.71□□□□□ -0.53
VRK3-219ENST00000600137 HSD11B1P28845 292 aa11.71□□□□□ -0.53
VRK3-219ENST00000600137 SLC6A9P48067 706 aa11.71□□□□□ -0.53
VRK3-219ENST00000600137 MMP16P51512 607 aa11.71□□□□□ -0.53
VRK3-219ENST00000600137 EFNA4P52798 201 aa11.71□□□□□ -0.53
VRK3-219ENST00000600137 PSMA6P60900 246 aaKnown RBP11.71□□□□□ -0.53
VRK3-219ENST00000600137 SPRNQ5BIV9 151 aa11.71□□□□□ -0.53
VRK3-219ENST00000600137 OR2T2Q6IF00 324 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms