RNA–Protein interactions for RNA: ENST00000594973.5

SHKBP1-205, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-205ENST00000594973 PCOLCEQ15113 449 aa15.23■□□□□ 0.03
SHKBP1-205ENST00000594973 KIF26BQ2KJY2 2108 aa15.23■□□□□ 0.03
SHKBP1-205ENST00000594973 LRRC69Q6ZNQ3 347 aa15.23■□□□□ 0.03
SHKBP1-205ENST00000594973 ZNF519Q8TB69 540 aa15.23■□□□□ 0.03
SHKBP1-205ENST00000594973 SLC25A28Q96A46 364 aa15.23■□□□□ 0.03
SHKBP1-205ENST00000594973 SLC25A38Q96DW6 304 aa15.23■□□□□ 0.03
SHKBP1-205ENST00000594973 S100A16Q96FQ6 103 aaKnown RBP15.23■□□□□ 0.03
SHKBP1-205ENST00000594973 NXT1Q9UKK6 140 aaKnown RBP15.23■□□□□ 0.03
SHKBP1-205ENST00000594973 A0A1B0GTH9 108 aa15.23■□□□□ 0.03
SHKBP1-205ENST00000594973 FTCDNL1E5RQL4 147 aa15.23■□□□□ 0.03
SHKBP1-205ENST00000594973 TACSTD2P09758 323 aa15.23■□□□□ 0.03
SHKBP1-205ENST00000594973 PTAFRP25105 342 aa15.23■□□□□ 0.03
SHKBP1-205ENST00000594973 DCTDP32321 178 aa15.23■□□□□ 0.03
SHKBP1-205ENST00000594973 APOBEC1P41238 236 aaKnown RBP15.23■□□□□ 0.03
SHKBP1-205ENST00000594973 INSM1Q01101 510 aaPredicted RBP15.23■□□□□ 0.03
SHKBP1-205ENST00000594973 H3F3CQ6NXT2 135 aa15.23■□□□□ 0.03
SHKBP1-205ENST00000594973 DNM1P46Q6ZS02 220 aa15.23■□□□□ 0.03
SHKBP1-205ENST00000594973 KRT77Q7Z794 578 aa15.23■□□□□ 0.03
SHKBP1-205ENST00000594973 ZFP82Q8N141 532 aa15.23■□□□□ 0.03
SHKBP1-205ENST00000594973 MUC20Q8N307 709 aaPredicted RBP15.23■□□□□ 0.03
SHKBP1-205ENST00000594973 OR1S2Q8NGQ3 325 aa15.23■□□□□ 0.03
SHKBP1-205ENST00000594973 RNF166Q96A37 237 aaPredicted RBP15.23■□□□□ 0.03
SHKBP1-205ENST00000594973 SEC11CQ9BY50 192 aa15.23■□□□□ 0.03
SHKBP1-205ENST00000594973 TMEM185BQ9H7F4 350 aa15.23■□□□□ 0.03
SHKBP1-205ENST00000594973 NOX4Q9NPH5 578 aa15.23■□□□□ 0.03
SHKBP1-205ENST00000594973 KCNG2Q9UJ96 466 aa15.23■□□□□ 0.03
SHKBP1-205ENST00000594973 FBXO4Q9UKT5 387 aa15.23■□□□□ 0.03
SHKBP1-205ENST00000594973 B9D1Q9UPM9 204 aa15.23■□□□□ 0.03
SHKBP1-205ENST00000594973 AK6Q9Y3D8 172 aaKnown RBP15.23■□□□□ 0.03
SHKBP1-205ENST00000594973 WIF1Q9Y5W5 379 aa15.23■□□□□ 0.03
SHKBP1-205ENST00000594973 EXPH5Q8NEV8 1989 aa15.23■□□□□ 0.03
SHKBP1-205ENST00000594973 TRAV14DV4A0A0A6YYC5 116 aa15.22■□□□□ 0.03
SHKBP1-205ENST00000594973 C9J4A7 227 aa15.22■□□□□ 0.03
SHKBP1-205ENST00000594973 H3BSH0 61 aa15.22■□□□□ 0.03
SHKBP1-205ENST00000594973 M0R296 226 aa15.22■□□□□ 0.03
SHKBP1-205ENST00000594973 KLF7O75840 302 aaPredicted RBP15.22■□□□□ 0.03
SHKBP1-205ENST00000594973 CD1AP06126 327 aa15.22■□□□□ 0.03
SHKBP1-205ENST00000594973 FBXO45P0C2W1 286 aa15.22■□□□□ 0.03
SHKBP1-205ENST00000594973 CTLA4P16410 223 aa15.22■□□□□ 0.03
SHKBP1-205ENST00000594973 BTF3P20290 206 aaKnown RBP15.22■□□□□ 0.03
SHKBP1-205ENST00000594973 DPP4P27487 766 aa15.22■□□□□ 0.03
SHKBP1-205ENST00000594973 BDKRB2P30411 391 aa15.22■□□□□ 0.03
SHKBP1-205ENST00000594973 PTGDSP41222 190 aa15.22■□□□□ 0.03
SHKBP1-205ENST00000594973 HABP2Q14520 560 aaPredicted RBP15.22■□□□□ 0.03
SHKBP1-205ENST00000594973 SMCO1Q147U7 214 aa15.22■□□□□ 0.03
SHKBP1-205ENST00000594973 PRAMEF20Q5VT98 475 aa15.22■□□□□ 0.03
SHKBP1-205ENST00000594973 SLC35D2Q76EJ3 337 aa15.22■□□□□ 0.03
SHKBP1-205ENST00000594973 RHBDD1Q8TEB9 315 aa15.22■□□□□ 0.03
SHKBP1-205ENST00000594973 TNFAIP8L1Q8WVP5 186 aa15.22■□□□□ 0.03
SHKBP1-205ENST00000594973 EDARADDQ8WWZ3 215 aa15.22■□□□□ 0.03
SHKBP1-205ENST00000594973 GCDHQ92947 438 aaPredicted RBP15.22■□□□□ 0.03
SHKBP1-205ENST00000594973 SPACA9Q96E40 222 aaPredicted RBP15.22■□□□□ 0.03
SHKBP1-205ENST00000594973 AMELYQ99218 206 aa15.22■□□□□ 0.03
SHKBP1-205ENST00000594973 PAPOLGQ9BWT3 736 aaKnown RBP15.22■□□□□ 0.03
SHKBP1-205ENST00000594973 FOXJ3Q9UPW0 622 aa15.22■□□□□ 0.03
SHKBP1-205ENST00000594973 UPK3AO75631 287 aa15.22■□□□□ 0.03
SHKBP1-205ENST00000594973 ABOP16442 354 aa15.22■□□□□ 0.03
SHKBP1-205ENST00000594973 ALOX5APP20292 161 aa15.22■□□□□ 0.03
SHKBP1-205ENST00000594973 MPLP40238 635 aa15.22■□□□□ 0.03
SHKBP1-205ENST00000594973 SUMO3P55854 103 aaPredicted RBP15.22■□□□□ 0.03
SHKBP1-205ENST00000594973 FOXK1P85037 733 aa15.22■□□□□ 0.03
SHKBP1-205ENST00000594973 ODF4Q2M2E3 257 aa15.22■□□□□ 0.03
SHKBP1-205ENST00000594973 C11orf88Q6PI97 169 aa15.22■□□□□ 0.03
SHKBP1-205ENST00000594973 RBMS3Q6XE24 437 aaKnown RBP15.22■□□□□ 0.03
SHKBP1-205ENST00000594973 ZNF248Q8NDW4 579 aa15.22■□□□□ 0.03
SHKBP1-205ENST00000594973 SLC25A18Q9H1K4 315 aa15.22■□□□□ 0.03
SHKBP1-205ENST00000594973 TCF7L1Q9HCS4 588 aa15.22■□□□□ 0.03
SHKBP1-205ENST00000594973 ZNF281Q9Y2X9 895 aa15.22■□□□□ 0.03
SHKBP1-205ENST00000594973 IGHV1-45A0A0A0MS14 117 aa15.21■□□□□ 0.03
SHKBP1-205ENST00000594973 MASP2O00187 686 aa15.21■□□□□ 0.03
SHKBP1-205ENST00000594973 CD8AP01732 235 aa15.21■□□□□ 0.03
SHKBP1-205ENST00000594973 LUMP51884 338 aaPredicted RBP15.21■□□□□ 0.03
SHKBP1-205ENST00000594973 CXADRP78310 365 aa15.21■□□□□ 0.03
SHKBP1-205ENST00000594973 MEP1BQ16820 701 aa15.21■□□□□ 0.03
SHKBP1-205ENST00000594973 TMEM69Q5SWH9 247 aa15.21■□□□□ 0.03
SHKBP1-205ENST00000594973 FAAP20Q6NZ36 180 aa15.21■□□□□ 0.03
SHKBP1-205ENST00000594973 ZNF813Q6ZN06 617 aa15.21■□□□□ 0.03
SHKBP1-205ENST00000594973 OR6N1Q8NGY5 312 aa15.21■□□□□ 0.03
SHKBP1-205ENST00000594973 RGP1Q92546 391 aaPredicted RBP15.21■□□□□ 0.03
SHKBP1-205ENST00000594973 DDIT4LQ96D03 193 aa15.21■□□□□ 0.03
SHKBP1-205ENST00000594973 ADAT1Q9BUB4 502 aaKnown RBP15.21■□□□□ 0.03
SHKBP1-205ENST00000594973 EGLN1Q9GZT9 426 aa15.21■□□□□ 0.03
SHKBP1-205ENST00000594973 FRRS1LQ9P0K9 344 aa15.21■□□□□ 0.03
SHKBP1-205ENST00000594973 B3GALT1Q9Y5Z6 326 aa15.21■□□□□ 0.03
SHKBP1-205ENST00000594973 ZNF729A6NN14 1252 aaPredicted RBP15.21■□□□□ 0.02
SHKBP1-205ENST00000594973 ZNF879B4DU55 563 aa15.21■□□□□ 0.02
SHKBP1-205ENST00000594973 MS4A18H0YCH9 400 aa15.21■□□□□ 0.02
SHKBP1-205ENST00000594973 FGF16O43320 207 aa15.21■□□□□ 0.02
SHKBP1-205ENST00000594973 EFNA2O43921 213 aa15.21■□□□□ 0.02
SHKBP1-205ENST00000594973 GPRIN2O60269 458 aa15.21■□□□□ 0.02
SHKBP1-205ENST00000594973 SLC25A4P12235 298 aa15.21■□□□□ 0.02
SHKBP1-205ENST00000594973 MS4A18Q3C1V0 323 aa15.21■□□□□ 0.02
SHKBP1-205ENST00000594973 OR1J4Q8NGS1 313 aa15.21■□□□□ 0.02
SHKBP1-205ENST00000594973 RNF138Q8WVD3 245 aa15.21■□□□□ 0.02
SHKBP1-205ENST00000594973 TMEM41AQ96HV5 264 aa15.21■□□□□ 0.02
SHKBP1-205ENST00000594973 C5orf34Q96MH7 638 aa15.21■□□□□ 0.02
SHKBP1-205ENST00000594973 ALX4Q9H161 411 aaPredicted RBP15.21■□□□□ 0.02
SHKBP1-205ENST00000594973 TMEM272A0A1B0GTI8 110 aa15.2■□□□□ 0.02
SHKBP1-205ENST00000594973 IFITM5A6NNB3 132 aa15.2■□□□□ 0.02
SHKBP1-205ENST00000594973 ABHD16AO95870 558 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms