RNA–Protein interactions for RNA: ENST00000591782.1

VMP1-212, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 729 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-212ENST00000591782 SMARCD3Q6STE5 483 aa2.93□□□□□ -1.94
VMP1-212ENST00000591782 TMEM107Q6UX40 140 aa2.93□□□□□ -1.94
VMP1-212ENST00000591782 MBOAT1Q6ZNC8 495 aa2.93□□□□□ -1.94
VMP1-212ENST00000591782 GCNT7Q6ZNI0 430 aa2.93□□□□□ -1.94
VMP1-212ENST00000591782 FCRLAQ7L513 359 aa2.93□□□□□ -1.94
VMP1-212ENST00000591782 ANKRD33Q7Z3H0 272 aa2.93□□□□□ -1.94
VMP1-212ENST00000591782 HSD17B13Q7Z5P4 300 aaPredicted RBP2.93□□□□□ -1.94
VMP1-212ENST00000591782 NRARPQ7Z6K4 114 aa2.93□□□□□ -1.94
VMP1-212ENST00000591782 SLC22A16Q86VW1 577 aa2.93□□□□□ -1.94
VMP1-212ENST00000591782 THOC6Q86W42 341 aaKnown RBP2.93□□□□□ -1.94
VMP1-212ENST00000591782 WDFY1Q8IWB7 410 aa2.93□□□□□ -1.94
VMP1-212ENST00000591782 MFSD6LQ8IWD5 586 aa2.93□□□□□ -1.94
VMP1-212ENST00000591782 LGI3Q8N145 548 aa2.93□□□□□ -1.94
VMP1-212ENST00000591782 LRRC75A-AS1Q8N1F1 130 aa2.93□□□□□ -1.94
VMP1-212ENST00000591782 C9orf62Q8N4C0 152 aa2.93□□□□□ -1.94
VMP1-212ENST00000591782 TEX26Q8N6G2 289 aa2.93□□□□□ -1.94
VMP1-212ENST00000591782 Q8N9G6 341 aaPredicted RBP2.93□□□□□ -1.94
VMP1-212ENST00000591782 OR11H1Q8NG94 326 aa2.93□□□□□ -1.94
VMP1-212ENST00000591782 OR6M1Q8NGM8 313 aa2.93□□□□□ -1.94
VMP1-212ENST00000591782 OR11H2Q8NH07 326 aa2.93□□□□□ -1.94
VMP1-212ENST00000591782 OR5AK3PQ8NH89 298 aa2.93□□□□□ -1.94
VMP1-212ENST00000591782 M1APQ8TC57 530 aa2.93□□□□□ -1.94
VMP1-212ENST00000591782 ASB17Q8WXJ9 295 aa2.93□□□□□ -1.94
VMP1-212ENST00000591782 ASB13Q8WXK3 278 aa2.93□□□□□ -1.94
VMP1-212ENST00000591782 ACOT12Q8WYK0 555 aa2.93□□□□□ -1.94
VMP1-212ENST00000591782 RGP1Q92546 391 aaPredicted RBP2.93□□□□□ -1.94
VMP1-212ENST00000591782 FAM46BQ96A09 425 aa2.93□□□□□ -1.94
VMP1-212ENST00000591782 RERGQ96A58 199 aaPredicted RBP2.93□□□□□ -1.94
VMP1-212ENST00000591782 PINX1Q96BK5 328 aaKnown RBP2.93□□□□□ -1.94
VMP1-212ENST00000591782 ZNF689Q96CS4 500 aaPredicted RBP2.93□□□□□ -1.94
VMP1-212ENST00000591782 DTD2Q96FN9 168 aa2.93□□□□□ -1.94
VMP1-212ENST00000591782 CDKN2AIPNLQ96HQ2 116 aa2.93□□□□□ -1.94
VMP1-212ENST00000591782 SLC45A3Q96JT2 553 aa2.93□□□□□ -1.94
VMP1-212ENST00000591782 ZNF382Q96SR6 550 aa2.93□□□□□ -1.94
VMP1-212ENST00000591782 NPY6RQ99463 290 aa2.93□□□□□ -1.94
VMP1-212ENST00000591782 CBWD1Q9BRT8 395 aa2.93□□□□□ -1.94
VMP1-212ENST00000591782 RSG1Q9BU20 258 aa2.93□□□□□ -1.94
VMP1-212ENST00000591782 FTHL17Q9BXU8 183 aa2.93□□□□□ -1.94
VMP1-212ENST00000591782 FGFBP2Q9BYJ0 223 aa2.93□□□□□ -1.94
VMP1-212ENST00000591782 ULBP2Q9BZM5 246 aa2.93□□□□□ -1.94
VMP1-212ENST00000591782 ZNF436Q9C0F3 470 aaPredicted RBP2.93□□□□□ -1.94
VMP1-212ENST00000591782 STRADBQ9C0K7 418 aa2.93□□□□□ -1.94
VMP1-212ENST00000591782 ELOVL4Q9GZR5 314 aa2.93□□□□□ -1.94
VMP1-212ENST00000591782 DCSTAMPQ9H295 470 aa2.93□□□□□ -1.94
VMP1-212ENST00000591782 RPF2Q9H7B2 306 aaKnown RBP2.93□□□□□ -1.94
VMP1-212ENST00000591782 ROPN1Q9HAT0 212 aaPredicted RBP2.93□□□□□ -1.94
VMP1-212ENST00000591782 LYRM4Q9HD34 91 aa2.93□□□□□ -1.94
VMP1-212ENST00000591782 SLCO1B3Q9NPD5 702 aa2.93□□□□□ -1.94
VMP1-212ENST00000591782 PHPT1Q9NRX4 125 aaPredicted RBP2.93□□□□□ -1.94
VMP1-212ENST00000591782 C14orf105Q9NVL8 296 aa2.93□□□□□ -1.94
VMP1-212ENST00000591782 CNOT2Q9NZN8 540 aaKnown RBP2.93□□□□□ -1.94
VMP1-212ENST00000591782 GHRLQ9UBU3 117 aa2.93□□□□□ -1.94
VMP1-212ENST00000591782 FBXL3Q9UKT7 428 aa2.93□□□□□ -1.94
VMP1-212ENST00000591782 PRPF19Q9UMS4 504 aaKnown RBP2.93□□□□□ -1.94
VMP1-212ENST00000591782 NIP7Q9Y221 180 aaKnown RBP eCLIP2.93□□□□□ -1.94
VMP1-212ENST00000591782 SLC6A5Q9Y345 797 aa2.93□□□□□ -1.94
VMP1-212ENST00000591782 MMP24Q9Y5R2 645 aa2.93□□□□□ -1.94
VMP1-212ENST00000591782 MAP2P11137 1827 aaKnown RBP2.93□□□□□ -1.94
VMP1-212ENST00000591782 CPS1P31327 1500 aa2.93□□□□□ -1.94
VMP1-212ENST00000591782 ABCC5O15440 1437 aa2.93□□□□□ -1.94
VMP1-212ENST00000591782 NPHP4O75161 1426 aaPredicted RBP2.93□□□□□ -1.94
VMP1-212ENST00000591782 RIC1Q4ADV7 1423 aa2.93□□□□□ -1.94
VMP1-212ENST00000591782 CD109Q6YHK3 1445 aa2.93□□□□□ -1.94
VMP1-212ENST00000591782 NSD3Q9BZ95 1437 aa2.93□□□□□ -1.94
VMP1-212ENST00000591782 GCC2Q8IWJ2 1684 aa2.92□□□□□ -1.94
VMP1-212ENST00000591782 DENND4BO75064 1496 aaPredicted RBP2.92□□□□□ -1.94
VMP1-212ENST00000591782 PZPP20742 1482 aa2.92□□□□□ -1.94
VMP1-212ENST00000591782 TRAV26-1A0A087WT03 109 aa2.92□□□□□ -1.94
VMP1-212ENST00000591782 KCNE1BA0A087WTH5 132 aa2.92□□□□□ -1.94
VMP1-212ENST00000591782 A0A096LPI6 279 aa2.92□□□□□ -1.94
VMP1-212ENST00000591782 A0A0J9YWU9 116 aa2.92□□□□□ -1.94
VMP1-212ENST00000591782 TRBV11-1A0A0K0K1C0 115 aa2.92□□□□□ -1.94
VMP1-212ENST00000591782 GLTPD2A6NH11 291 aa2.92□□□□□ -1.94
VMP1-212ENST00000591782 C17orf105B2RV13 164 aa2.92□□□□□ -1.94
VMP1-212ENST00000591782 ANHXE9PGG2 379 aa2.92□□□□□ -1.94
VMP1-212ENST00000591782 H0Y980 276 aa2.92□□□□□ -1.94
VMP1-212ENST00000591782 H3BMQ9 156 aa2.92□□□□□ -1.94
VMP1-212ENST00000591782 M0R296 226 aa2.92□□□□□ -1.94
VMP1-212ENST00000591782 RFXANKO14593 260 aa2.92□□□□□ -1.94
VMP1-212ENST00000591782 MAGEB4O15481 346 aaPredicted RBP2.92□□□□□ -1.94
VMP1-212ENST00000591782 RGS16O15492 202 aaPredicted RBP2.92□□□□□ -1.94
VMP1-212ENST00000591782 XRCC2O43543 280 aa2.92□□□□□ -1.94
VMP1-212ENST00000591782 PRAF2O60831 178 aa2.92□□□□□ -1.94
VMP1-212ENST00000591782 LYPLA1O75608 230 aaPredicted RBP2.92□□□□□ -1.94
VMP1-212ENST00000591782 UPK1BO75841 260 aa2.92□□□□□ -1.94
VMP1-212ENST00000591782 OR4F21O95013 312 aa2.92□□□□□ -1.94
VMP1-212ENST00000591782 VAMP5O95183 116 aa2.92□□□□□ -1.94
VMP1-212ENST00000591782 GADD45GO95257 159 aa2.92□□□□□ -1.94
VMP1-212ENST00000591782 TBX6O95947 436 aaPredicted RBP2.92□□□□□ -1.94
VMP1-212ENST00000591782 LALBAP00709 142 aa2.92□□□□□ -1.94
VMP1-212ENST00000591782 MT-ND1P03886 318 aa2.92□□□□□ -1.94
VMP1-212ENST00000591782 OR8U9P0C7N5 309 aa2.92□□□□□ -1.94
VMP1-212ENST00000591782 GABRA1P14867 456 aa2.92□□□□□ -1.94
VMP1-212ENST00000591782 HLA-GP17693 338 aa2.92□□□□□ -1.94
VMP1-212ENST00000591782 CELP19835 753 aa2.92□□□□□ -1.94
VMP1-212ENST00000591782 MMP11P24347 488 aa2.92□□□□□ -1.94
VMP1-212ENST00000591782 CEACAM3P40198 252 aa2.92□□□□□ -1.94
VMP1-212ENST00000591782 CD200P41217 278 aa2.92□□□□□ -1.94
VMP1-212ENST00000591782 SOX3P41225 446 aa2.92□□□□□ -1.94
VMP1-212ENST00000591782 AKR1C3P42330 323 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms