RNA–Protein interactions for RNA: ENST00000581631.1

SMCHD1-206, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 729 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-206ENST00000581631 SMKR1H3BMG3 65 aa1.21□□□□□ -2.22
SMCHD1-206ENST00000581631 H7C1H1 209 aa1.21□□□□□ -2.22
SMCHD1-206ENST00000581631 AIM2O14862 343 aa1.21□□□□□ -2.22
SMCHD1-206ENST00000581631 CHMP2AO43633 222 aa1.21□□□□□ -2.22
SMCHD1-206ENST00000581631 ZNF35P13682 527 aa1.21□□□□□ -2.22
SMCHD1-206ENST00000581631 UBE2E1P51965 193 aa1.21□□□□□ -2.22
SMCHD1-206ENST00000581631 CMC4P56277 68 aaPredicted RBP1.21□□□□□ -2.22
SMCHD1-206ENST00000581631 SP4Q02446 784 aa1.21□□□□□ -2.22
SMCHD1-206ENST00000581631 TNFRSF9Q07011 255 aa1.21□□□□□ -2.22
SMCHD1-206ENST00000581631 NCF4Q15080 339 aa1.21□□□□□ -2.22
SMCHD1-206ENST00000581631 TAF7Q15545 349 aaPredicted RBP1.21□□□□□ -2.22
SMCHD1-206ENST00000581631 PRAMEF5Q5TYX0 476 aa1.21□□□□□ -2.22
SMCHD1-206ENST00000581631 PRAMEF6Q5VXH4 476 aa1.21□□□□□ -2.22
SMCHD1-206ENST00000581631 RNASEKQ6P5S7 137 aaKnown RBP1.21□□□□□ -2.22
SMCHD1-206ENST00000581631 DEGS2Q6QHC5 323 aa1.21□□□□□ -2.22
SMCHD1-206ENST00000581631 PPP1R42Q7Z4L9 355 aa1.21□□□□□ -2.22
SMCHD1-206ENST00000581631 OR10G6Q8NH81 332 aa1.21□□□□□ -2.22
SMCHD1-206ENST00000581631 APH1BQ8WW43 257 aa1.21□□□□□ -2.22
SMCHD1-206ENST00000581631 ZBTB18Q99592 522 aa1.21□□□□□ -2.22
SMCHD1-206ENST00000581631 NEUROG2Q9H2A3 272 aa1.21□□□□□ -2.22
SMCHD1-206ENST00000581631 MYOZ1Q9NP98 299 aaPredicted RBP1.21□□□□□ -2.22
SMCHD1-206ENST00000581631 MED4Q9NPJ6 270 aa1.21□□□□□ -2.22
SMCHD1-206ENST00000581631 PISDQ9UG56 409 aa1.21□□□□□ -2.22
SMCHD1-206ENST00000581631 TICRRQ7Z2Z1 1910 aa1.21□□□□□ -2.22
SMCHD1-206ENST00000581631 A0A1B0GUH1 482 aa1.2□□□□□ -2.22
SMCHD1-206ENST00000581631 NCBP2LA6PVI3 153 aaKnown RBP1.2□□□□□ -2.22
SMCHD1-206ENST00000581631 PRAMEF26H0Y7S4 382 aa1.2□□□□□ -2.22
SMCHD1-206ENST00000581631 K7EMT4 169 aa1.2□□□□□ -2.22
SMCHD1-206ENST00000581631 RAD51CO43502 376 aa1.2□□□□□ -2.22
SMCHD1-206ENST00000581631 SERPINB7O75635 380 aa1.2□□□□□ -2.22
SMCHD1-206ENST00000581631 SERPINA3P01011 423 aa1.2□□□□□ -2.22
SMCHD1-206ENST00000581631 PTMAP06454 111 aaKnown RBP1.2□□□□□ -2.22
SMCHD1-206ENST00000581631 CD28P10747 220 aa1.2□□□□□ -2.22
SMCHD1-206ENST00000581631 NCF2P19878 526 aaPredicted RBP1.2□□□□□ -2.22
SMCHD1-206ENST00000581631 TGFBR2P37173 567 aa1.2□□□□□ -2.22
SMCHD1-206ENST00000581631 PRPHP41219 470 aa1.2□□□□□ -2.22
SMCHD1-206ENST00000581631 GALR1P47211 349 aa1.2□□□□□ -2.22
SMCHD1-206ENST00000581631 ACLYP53396 1101 aa1.2□□□□□ -2.22
SMCHD1-206ENST00000581631 TAS2R46P59540 309 aa1.2□□□□□ -2.22
SMCHD1-206ENST00000581631 PNOCQ13519 176 aa1.2□□□□□ -2.22
SMCHD1-206ENST00000581631 SLC25A35Q3KQZ1 300 aa1.2□□□□□ -2.22
SMCHD1-206ENST00000581631 CENPPQ6IPU0 288 aa1.2□□□□□ -2.22
SMCHD1-206ENST00000581631 CASC1Q6TDU7 716 aa1.2□□□□□ -2.22
SMCHD1-206ENST00000581631 C12orf54Q6X4T0 127 aa1.2□□□□□ -2.22
SMCHD1-206ENST00000581631 RGS9BPQ6ZS82 235 aa1.2□□□□□ -2.22
SMCHD1-206ENST00000581631 CDR2LQ86X02 465 aaPredicted RBP1.2□□□□□ -2.22
SMCHD1-206ENST00000581631 FAM71AQ8IYT1 594 aa1.2□□□□□ -2.22
SMCHD1-206ENST00000581631 TBC1D21Q8IYX1 336 aa1.2□□□□□ -2.22
SMCHD1-206ENST00000581631 UBE2J2Q8N2K1 259 aa1.2□□□□□ -2.22
SMCHD1-206ENST00000581631 CBR4Q8N4T8 237 aa1.2□□□□□ -2.22
SMCHD1-206ENST00000581631 TMEM243Q9BU79 118 aa1.2□□□□□ -2.22
SMCHD1-206ENST00000581631 GCOM2Q9BZD3 368 aaPredicted RBP1.2□□□□□ -2.22
SMCHD1-206ENST00000581631 SLC17A7Q9P2U7 560 aa1.2□□□□□ -2.22
SMCHD1-206ENST00000581631 AKNAQ7Z591 1439 aa1.2□□□□□ -2.22
SMCHD1-206ENST00000581631 USP47Q96K76 1375 aa1.2□□□□□ -2.22
SMCHD1-206ENST00000581631 SYCE1LA8MT33 242 aa1.19□□□□□ -2.22
SMCHD1-206ENST00000581631 C4orf51C9J302 202 aa1.19□□□□□ -2.22
SMCHD1-206ENST00000581631 TNFRSF11BO00300 401 aa1.19□□□□□ -2.22
SMCHD1-206ENST00000581631 CXCL11O14625 94 aa1.19□□□□□ -2.22
SMCHD1-206ENST00000581631 FLOT1O75955 427 aa1.19□□□□□ -2.22
SMCHD1-206ENST00000581631 IGLV7-43P04211 117 aa1.19□□□□□ -2.22
SMCHD1-206ENST00000581631 RPN2P04844 631 aa1.19□□□□□ -2.22
SMCHD1-206ENST00000581631 INAFM2P0DMQ5 153 aa1.19□□□□□ -2.22
SMCHD1-206ENST00000581631 CT45A6P0DMU7 189 aa1.19□□□□□ -2.22
SMCHD1-206ENST00000581631 CT45A5P0DMU8 189 aa1.19□□□□□ -2.22
SMCHD1-206ENST00000581631 CT45A7P0DMV0 189 aa1.19□□□□□ -2.22
SMCHD1-206ENST00000581631 IL32P24001 234 aa1.19□□□□□ -2.22
SMCHD1-206ENST00000581631 POLR2IP36954 125 aaKnown RBP1.19□□□□□ -2.22
SMCHD1-206ENST00000581631 EIF3EP60228 445 aaKnown RBP1.19□□□□□ -2.22
SMCHD1-206ENST00000581631 ZMYND11Q15326 602 aa1.19□□□□□ -2.22
SMCHD1-206ENST00000581631 KRTAP13-4Q3LI77 160 aa1.19□□□□□ -2.22
SMCHD1-206ENST00000581631 CT45A1Q5HYN5 189 aa1.19□□□□□ -2.22
SMCHD1-206ENST00000581631 TMEM107Q6UX40 140 aa1.19□□□□□ -2.22
SMCHD1-206ENST00000581631 NPSR1Q6W5P4 371 aa1.19□□□□□ -2.22
SMCHD1-206ENST00000581631 CERS6Q6ZMG9 384 aa1.19□□□□□ -2.22
SMCHD1-206ENST00000581631 ERO1BQ86YB8 467 aa1.19□□□□□ -2.22
SMCHD1-206ENST00000581631 OR2Z1Q8NG97 314 aa1.19□□□□□ -2.22
SMCHD1-206ENST00000581631 CT45A3Q8NHU0 189 aa1.19□□□□□ -2.22
SMCHD1-206ENST00000581631 NUBPLQ8TB37 319 aa1.19□□□□□ -2.22
SMCHD1-206ENST00000581631 OR51E1Q8TCB6 317 aa1.19□□□□□ -2.22
SMCHD1-206ENST00000581631 GHSRQ92847 366 aa1.19□□□□□ -2.22
SMCHD1-206ENST00000581631 NT5C3BQ969T7 300 aa1.19□□□□□ -2.22
SMCHD1-206ENST00000581631 ECHDC3Q96DC8 303 aa1.19□□□□□ -2.22
SMCHD1-206ENST00000581631 STACQ99469 402 aa1.19□□□□□ -2.22
SMCHD1-206ENST00000581631 KLF6Q99612 283 aaPredicted RBP1.19□□□□□ -2.22
SMCHD1-206ENST00000581631 NUDT9Q9BW91 350 aa1.19□□□□□ -2.22
SMCHD1-206ENST00000581631 ANKRD60Q9BZ19 345 aa1.19□□□□□ -2.22
SMCHD1-206ENST00000581631 ILKAPQ9H0C8 392 aaPredicted RBP1.19□□□□□ -2.22
SMCHD1-206ENST00000581631 RACGAP1Q9H0H5 632 aa1.19□□□□□ -2.22
SMCHD1-206ENST00000581631 SLC2A8Q9NY64 477 aa1.19□□□□□ -2.22
SMCHD1-206ENST00000581631 PDP1Q9P0J1 537 aaPredicted RBP1.19□□□□□ -2.22
SMCHD1-206ENST00000581631 ASB3Q9Y575 518 aa1.19□□□□□ -2.22
SMCHD1-206ENST00000581631 PCNX2A6NKB5 2137 aa1.19□□□□□ -2.22
SMCHD1-206ENST00000581631 ADGRA3Q8IWK6 1321 aa1.18□□□□□ -2.22
SMCHD1-206ENST00000581631 PDZK1P1A8MUH7 402 aa1.18□□□□□ -2.22
SMCHD1-206ENST00000581631 SERPINE2P07093 398 aa1.18□□□□□ -2.22
SMCHD1-206ENST00000581631 ZNF24P17028 368 aa1.18□□□□□ -2.22
SMCHD1-206ENST00000581631 TCP1P17987 556 aaKnown RBP1.18□□□□□ -2.22
SMCHD1-206ENST00000581631 GZMMP51124 257 aa1.18□□□□□ -2.22
SMCHD1-206ENST00000581631 ELF3P78545 371 aaPredicted RBP1.18□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms