RNA–Protein interactions for RNA: ENST00000576713.6

NPLOC4-219, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-219ENST00000576713 PLEK2Q9NYT0 353 aa8.1□□□□□ -1.11
NPLOC4-219ENST00000576713 NKX1-2Q9UD57 310 aaPredicted RBP8.1□□□□□ -1.11
NPLOC4-219ENST00000576713 KCNG2Q9UJ96 466 aa8.1□□□□□ -1.11
NPLOC4-219ENST00000576713 F8P00451 2351 aa8.1□□□□□ -1.11
NPLOC4-219ENST00000576713 TEP1Q99973 2627 aaKnown RBP8.09□□□□□ -1.11
NPLOC4-219ENST00000576713 DSCAMO60469 2012 aa8.09□□□□□ -1.11
NPLOC4-219ENST00000576713 ZNF593O00488 134 aaPredicted RBP8.09□□□□□ -1.11
NPLOC4-219ENST00000576713 TLX2O43763 284 aaPredicted RBP8.09□□□□□ -1.11
NPLOC4-219ENST00000576713 HMGN1P05114 100 aa8.09□□□□□ -1.11
NPLOC4-219ENST00000576713 MRPL3P09001 348 aaKnown RBP8.09□□□□□ -1.11
NPLOC4-219ENST00000576713 SPARCP09486 303 aa8.09□□□□□ -1.11
NPLOC4-219ENST00000576713 COX5BP10606 129 aa8.09□□□□□ -1.11
NPLOC4-219ENST00000576713 PEX2P28328 305 aa8.09□□□□□ -1.11
NPLOC4-219ENST00000576713 PCSK6P29122 969 aa8.09□□□□□ -1.11
NPLOC4-219ENST00000576713 NAA10P41227 235 aaPredicted RBP8.09□□□□□ -1.11
NPLOC4-219ENST00000576713 GUCA1AP43080 201 aaPredicted RBP8.09□□□□□ -1.11
NPLOC4-219ENST00000576713 ALDH3B1P43353 468 aa8.09□□□□□ -1.11
NPLOC4-219ENST00000576713 ENTPD1P49961 510 aa8.09□□□□□ -1.11
NPLOC4-219ENST00000576713 GDI2P50395 445 aaKnown RBP8.09□□□□□ -1.11
NPLOC4-219ENST00000576713 MLANAQ16655 118 aa8.09□□□□□ -1.11
NPLOC4-219ENST00000576713 LRRC36Q1X8D7 754 aa8.09□□□□□ -1.11
NPLOC4-219ENST00000576713 KLHL12Q53G59 568 aa8.09□□□□□ -1.11
NPLOC4-219ENST00000576713 Q5PR19 223 aa8.09□□□□□ -1.11
NPLOC4-219ENST00000576713 ELFN2Q5R3F8 820 aa8.09□□□□□ -1.11
NPLOC4-219ENST00000576713 AGAP6Q5VW22 663 aa8.09□□□□□ -1.11
NPLOC4-219ENST00000576713 DNM1P46Q6ZS02 220 aa8.09□□□□□ -1.11
NPLOC4-219ENST00000576713 DPY19L4Q7Z388 723 aa8.09□□□□□ -1.11
NPLOC4-219ENST00000576713 DCXRQ7Z4W1 244 aa8.09□□□□□ -1.11
NPLOC4-219ENST00000576713 THNSL2Q86YJ6 484 aa8.09□□□□□ -1.11
NPLOC4-219ENST00000576713 ERI1Q8IV48 349 aaKnown RBP8.09□□□□□ -1.11
NPLOC4-219ENST00000576713 CIARTQ8N365 385 aaPredicted RBP8.09□□□□□ -1.11
NPLOC4-219ENST00000576713 GJC3Q8NFK1 279 aa8.09□□□□□ -1.11
NPLOC4-219ENST00000576713 OR10H5Q8NGA6 315 aa8.09□□□□□ -1.11
NPLOC4-219ENST00000576713 OR1J1Q8NGS3 322 aa8.09□□□□□ -1.11
NPLOC4-219ENST00000576713 SLC25A40Q8TBP6 338 aa8.09□□□□□ -1.11
NPLOC4-219ENST00000576713 TMEM163Q8TC26 289 aa8.09□□□□□ -1.11
NPLOC4-219ENST00000576713 IPCEF1Q8WWN9 437 aaPredicted RBP8.09□□□□□ -1.11
NPLOC4-219ENST00000576713 MARS2Q96GW9 593 aaKnown RBP8.09□□□□□ -1.11
NPLOC4-219ENST00000576713 C4orf45Q96LM5 186 aa8.09□□□□□ -1.11
NPLOC4-219ENST00000576713 OR2J1Q9GZK6 312 aa8.09□□□□□ -1.11
NPLOC4-219ENST00000576713 C1orf198Q9H425 327 aa8.09□□□□□ -1.11
NPLOC4-219ENST00000576713 TOR3AQ9H497 397 aa8.09□□□□□ -1.11
NPLOC4-219ENST00000576713 FBXL3Q9UKT7 428 aa8.09□□□□□ -1.11
NPLOC4-219ENST00000576713 EDARQ9UNE0 448 aa8.09□□□□□ -1.11
NPLOC4-219ENST00000576713 POLR1DQ9Y2S0 133 aa8.09□□□□□ -1.11
NPLOC4-219ENST00000576713 STARD10Q9Y365 291 aa8.09□□□□□ -1.11
NPLOC4-219ENST00000576713 ZFHX3Q15911 3703 aa8.08□□□□□ -1.12
NPLOC4-219ENST00000576713 IGLV3-9A0A075B6K5 115 aa8.08□□□□□ -1.12
NPLOC4-219ENST00000576713 TRIM64A6NGJ6 449 aa8.08□□□□□ -1.12
NPLOC4-219ENST00000576713 TRIM64BA6NI03 449 aa8.08□□□□□ -1.12
NPLOC4-219ENST00000576713 H7C417 338 aa8.08□□□□□ -1.12
NPLOC4-219ENST00000576713 APOL3O95236 402 aa8.08□□□□□ -1.12
NPLOC4-219ENST00000576713 AMY2AP04746 511 aa8.08□□□□□ -1.12
NPLOC4-219ENST00000576713 LCKP06239 509 aa8.08□□□□□ -1.12
NPLOC4-219ENST00000576713 ACSM4P0C7M7 580 aa8.08□□□□□ -1.12
NPLOC4-219ENST00000576713 ZNF250P15622 560 aa8.08□□□□□ -1.12
NPLOC4-219ENST00000576713 ZNF823P16415 610 aa8.08□□□□□ -1.12
NPLOC4-219ENST00000576713 AMY2BP19961 511 aa8.08□□□□□ -1.12
NPLOC4-219ENST00000576713 FMO3P31513 532 aa8.08□□□□□ -1.12
NPLOC4-219ENST00000576713 ATP5J2P56134 94 aa8.08□□□□□ -1.12
NPLOC4-219ENST00000576713 PPP1CBP62140 327 aa8.08□□□□□ -1.12
NPLOC4-219ENST00000576713 GALK2Q01415 458 aa8.08□□□□□ -1.12
NPLOC4-219ENST00000576713 HLXQ14774 488 aaPredicted RBP8.08□□□□□ -1.12
NPLOC4-219ENST00000576713 SNAI3Q3KNW1 292 aa8.08□□□□□ -1.12
NPLOC4-219ENST00000576713 TMEM177Q53S58 311 aa8.08□□□□□ -1.12
NPLOC4-219ENST00000576713 SPRNQ5BIV9 151 aa8.08□□□□□ -1.12
NPLOC4-219ENST00000576713 TEX30Q5JUR7 227 aa8.08□□□□□ -1.12
NPLOC4-219ENST00000576713 LRRC75A-AS1Q8N1F1 130 aa8.08□□□□□ -1.12
NPLOC4-219ENST00000576713 OR6N2Q8NGY6 317 aa8.08□□□□□ -1.12
NPLOC4-219ENST00000576713 KLF14Q8TD94 323 aaPredicted RBP8.08□□□□□ -1.12
NPLOC4-219ENST00000576713 STMN2Q93045 179 aa8.08□□□□□ -1.12
NPLOC4-219ENST00000576713 SLAMF6Q96DU3 332 aa8.08□□□□□ -1.12
NPLOC4-219ENST00000576713 TEAD3Q99594 435 aa8.08□□□□□ -1.12
NPLOC4-219ENST00000576713 PITX2Q99697 317 aa8.08□□□□□ -1.12
NPLOC4-219ENST00000576713 COQ7Q99807 217 aa8.08□□□□□ -1.12
NPLOC4-219ENST00000576713 ATF6BQ99941 703 aa8.08□□□□□ -1.12
NPLOC4-219ENST00000576713 WACQ9BTA9 647 aa8.08□□□□□ -1.12
NPLOC4-219ENST00000576713 TTTY10Q9BZA0 68 aa8.08□□□□□ -1.12
NPLOC4-219ENST00000576713 TPK1Q9H3S4 243 aa8.08□□□□□ -1.12
NPLOC4-219ENST00000576713 DDX28Q9NUL7 540 aaKnown RBP8.08□□□□□ -1.12
NPLOC4-219ENST00000576713 FAIMQ9NVQ4 179 aa8.08□□□□□ -1.12
NPLOC4-219ENST00000576713 DNAJC27Q9NZQ0 273 aa8.08□□□□□ -1.12
NPLOC4-219ENST00000576713 COPS3Q9UNS2 423 aa8.08□□□□□ -1.12
NPLOC4-219ENST00000576713 GRIP1Q9Y3R0 1128 aa8.08□□□□□ -1.12
NPLOC4-219ENST00000576713 CMAHPQ9Y471 501 aa8.08□□□□□ -1.12
NPLOC4-219ENST00000576713 MED13LQ71F56 2210 aa8.08□□□□□ -1.12
NPLOC4-219ENST00000576713 USF3Q68DE3 2245 aa8.07□□□□□ -1.12
NPLOC4-219ENST00000576713 LOC100996750A0A140TA64 210 aa8.07□□□□□ -1.12
NPLOC4-219ENST00000576713 B9A039 149 aa8.07□□□□□ -1.12
NPLOC4-219ENST00000576713 ZNF561-AS1K7EIQ3 104 aa8.07□□□□□ -1.12
NPLOC4-219ENST00000576713 MAGEB4O15481 346 aaPredicted RBP8.07□□□□□ -1.12
NPLOC4-219ENST00000576713 NCR1O76036 304 aa8.07□□□□□ -1.12
NPLOC4-219ENST00000576713 ABHD16AO95870 558 aa8.07□□□□□ -1.12
NPLOC4-219ENST00000576713 PTHP01270 115 aa8.07□□□□□ -1.12
NPLOC4-219ENST00000576713 ADRA2AP08913 450 aa8.07□□□□□ -1.12
NPLOC4-219ENST00000576713 SLC2A1P11166 492 aa8.07□□□□□ -1.12
NPLOC4-219ENST00000576713 GABRB1P18505 474 aa8.07□□□□□ -1.12
NPLOC4-219ENST00000576713 PAICSP22234 425 aaKnown RBP8.07□□□□□ -1.12
NPLOC4-219ENST00000576713 OTX1P32242 354 aaPredicted RBP8.07□□□□□ -1.12
NPLOC4-219ENST00000576713 MMP15P51511 669 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms