RNA–Protein interactions for RNA: ENST00000574226.5

TVP23B-206, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TVP23B, Length 1,080 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-206ENST00000574226 PHC2Q8IXK0 858 aa13.93□□□□□ -0.18
TVP23B-206ENST00000574226 C1orf87Q8N0U7 546 aa13.93□□□□□ -0.18
TVP23B-206ENST00000574226 CELF2-AS1Q8N7Q2 184 aa13.93□□□□□ -0.18
TVP23B-206ENST00000574226 BCAS4Q8TDM0 211 aa13.93□□□□□ -0.18
TVP23B-206ENST00000574226 ITLN1Q8WWA0 313 aa13.93□□□□□ -0.18
TVP23B-206ENST00000574226 ERGIC1Q969X5 290 aa13.93□□□□□ -0.18
TVP23B-206ENST00000574226 ZNF799Q96GE5 643 aa13.93□□□□□ -0.18
TVP23B-206ENST00000574226 NMNAT2Q9BZQ4 307 aa13.93□□□□□ -0.18
TVP23B-206ENST00000574226 OPA3Q9H6K4 179 aa13.93□□□□□ -0.18
TVP23B-206ENST00000574226 PNRC2Q9NPJ4 139 aaKnown RBP13.93□□□□□ -0.18
TVP23B-206ENST00000574226 CMC2Q9NRP2 79 aa13.93□□□□□ -0.18
TVP23B-206ENST00000574226 TMEM100Q9NV29 134 aa13.93□□□□□ -0.18
TVP23B-206ENST00000574226 COMMD3-BMI1R4GMX3 469 aa13.93□□□□□ -0.18
TVP23B-206ENST00000574226 APOC1P02654 83 aa13.92□□□□□ -0.18
TVP23B-206ENST00000574226 SBK2P0C263 348 aa13.92□□□□□ -0.18
TVP23B-206ENST00000574226 PYCR1P32322 319 aa13.92□□□□□ -0.18
TVP23B-206ENST00000574226 MDH2P40926 338 aaKnown RBP13.92□□□□□ -0.18
TVP23B-206ENST00000574226 SLC15A1P46059 708 aa13.92□□□□□ -0.18
TVP23B-206ENST00000574226 ENTPD1P49961 510 aa13.92□□□□□ -0.18
TVP23B-206ENST00000574226 BTG1P62324 171 aa13.92□□□□□ -0.18
TVP23B-206ENST00000574226 CRMP1Q14194 572 aa13.92□□□□□ -0.18
TVP23B-206ENST00000574226 GK2Q14410 553 aaPredicted RBP13.92□□□□□ -0.18
TVP23B-206ENST00000574226 DCAF12L2Q5VW00 463 aa13.92□□□□□ -0.18
TVP23B-206ENST00000574226 RHOUQ7L0Q8 258 aa13.92□□□□□ -0.18
TVP23B-206ENST00000574226 ADGRG5Q8IZF4 528 aa13.92□□□□□ -0.18
TVP23B-206ENST00000574226 OR5AS1Q8N127 324 aa13.92□□□□□ -0.18
TVP23B-206ENST00000574226 MAP6Q96JE9 813 aa13.92□□□□□ -0.18
TVP23B-206ENST00000574226 MEGF10Q96KG7 1140 aa13.92□□□□□ -0.18
TVP23B-206ENST00000574226 FEVQ99581 238 aa13.92□□□□□ -0.18
TVP23B-206ENST00000574226 SP140LQ9H930 580 aa13.92□□□□□ -0.18
TVP23B-206ENST00000574226 ZNF556Q9HAH1 456 aa13.92□□□□□ -0.18
TVP23B-206ENST00000574226 GCM1Q9NP62 436 aa13.92□□□□□ -0.18
TVP23B-206ENST00000574226 VNN3Q9NY84 501 aa13.92□□□□□ -0.18
TVP23B-206ENST00000574226 FAM53CQ9NYF3 392 aa13.92□□□□□ -0.18
TVP23B-206ENST00000574226 UBAP1Q9NZ09 502 aa13.92□□□□□ -0.18
TVP23B-206ENST00000574226 SVEP1Q4LDE5 3571 aa13.91□□□□□ -0.18
TVP23B-206ENST00000574226 H3BN98 237 aa13.91□□□□□ -0.18
TVP23B-206ENST00000574226 TMEM178BH3BS89 294 aa13.91□□□□□ -0.18
TVP23B-206ENST00000574226 SPI1P17947 270 aa13.91□□□□□ -0.18
TVP23B-206ENST00000574226 PAICSP22234 425 aaKnown RBP13.91□□□□□ -0.18
TVP23B-206ENST00000574226 GRK5P34947 590 aa13.91□□□□□ -0.18
TVP23B-206ENST00000574226 GATA4P43694 442 aa13.91□□□□□ -0.18
TVP23B-206ENST00000574226 SLC6A9P48067 706 aa13.91□□□□□ -0.18
TVP23B-206ENST00000574226 PPP1R8Q12972 351 aaKnown RBP13.91□□□□□ -0.18
TVP23B-206ENST00000574226 FLOT2Q14254 428 aa13.91□□□□□ -0.18
TVP23B-206ENST00000574226 TAF13Q15543 124 aa13.91□□□□□ -0.18
TVP23B-206ENST00000574226 MRPL21Q7Z2W9 205 aaKnown RBP13.91□□□□□ -0.18
TVP23B-206ENST00000574226 DCXRQ7Z4W1 244 aa13.91□□□□□ -0.18
TVP23B-206ENST00000574226 ZFAND2BQ8WV99 257 aa13.91□□□□□ -0.18
TVP23B-206ENST00000574226 CANT1Q8WVQ1 401 aa13.91□□□□□ -0.18
TVP23B-206ENST00000574226 CLPTM1LQ96KA5 538 aa13.91□□□□□ -0.18
TVP23B-206ENST00000574226 TEX12Q9BXU0 123 aa13.91□□□□□ -0.18
TVP23B-206ENST00000574226 METTL17Q9H7H0 456 aaPredicted RBP13.91□□□□□ -0.18
TVP23B-206ENST00000574226 PATZ1Q9HBE1 687 aaKnown RBP13.91□□□□□ -0.18
TVP23B-206ENST00000574226 POLR3KQ9Y2Y1 108 aaPredicted RBP13.91□□□□□ -0.18
TVP23B-206ENST00000574226 CUBNO60494 3623 aa13.9□□□□□ -0.18
TVP23B-206ENST00000574226 TVP23AA6NH52 213 aa13.9□□□□□ -0.18
TVP23B-206ENST00000574226 ZNF878C9JN71 531 aa13.9□□□□□ -0.18
TVP23B-206ENST00000574226 ZNF593O00488 134 aaPredicted RBP13.9□□□□□ -0.18
TVP23B-206ENST00000574226 E2F6O75461 281 aa13.9□□□□□ -0.18
TVP23B-206ENST00000574226 SOX14O95416 240 aa13.9□□□□□ -0.18
TVP23B-206ENST00000574226 ANXA8P13928 327 aa13.9□□□□□ -0.18
TVP23B-206ENST00000574226 ERFP50548 548 aa13.9□□□□□ -0.18
TVP23B-206ENST00000574226 MMP16P51512 607 aa13.9□□□□□ -0.18
TVP23B-206ENST00000574226 RAD23AP54725 363 aa13.9□□□□□ -0.18
TVP23B-206ENST00000574226 GRB2P62993 217 aaKnown RBP13.9□□□□□ -0.18
TVP23B-206ENST00000574226 KRTAP24-1Q3LI83 254 aa13.9□□□□□ -0.18
TVP23B-206ENST00000574226 SPRNQ5BIV9 151 aa13.9□□□□□ -0.18
TVP23B-206ENST00000574226 KLBQ86Z14 1044 aa13.9□□□□□ -0.18
TVP23B-206ENST00000574226 OR10AD1Q8NGE0 317 aa13.9□□□□□ -0.18
TVP23B-206ENST00000574226 OR9Q1Q8NGQ5 310 aa13.9□□□□□ -0.18
TVP23B-206ENST00000574226 OR6K6Q8NGW6 343 aa13.9□□□□□ -0.18
TVP23B-206ENST00000574226 OR4Q3Q8NH05 313 aa13.9□□□□□ -0.18
TVP23B-206ENST00000574226 NANPQ8TBE9 248 aa13.9□□□□□ -0.18
TVP23B-206ENST00000574226 ZNF418Q8TF45 676 aaPredicted RBP13.9□□□□□ -0.18
TVP23B-206ENST00000574226 SPRYD4Q8WW59 207 aaPredicted RBP13.9□□□□□ -0.18
TVP23B-206ENST00000574226 SIGLEC11Q96RL6 698 aa13.9□□□□□ -0.18
TVP23B-206ENST00000574226 KCNJ15Q99712 375 aa13.9□□□□□ -0.18
TVP23B-206ENST00000574226 COPS4Q9BT78 406 aa13.9□□□□□ -0.18
TVP23B-206ENST00000574226 TOR3AQ9H497 397 aa13.9□□□□□ -0.18
TVP23B-206ENST00000574226 ARMC1Q9NVT9 282 aa13.9□□□□□ -0.18
TVP23B-206ENST00000574226 GMDSO60547 372 aa13.89□□□□□ -0.19
TVP23B-206ENST00000574226 DNAJC8O75937 253 aaPredicted RBP13.89□□□□□ -0.19
TVP23B-206ENST00000574226 HMGN1P05114 100 aa13.89□□□□□ -0.19
TVP23B-206ENST00000574226 SPARCP09486 303 aa13.89□□□□□ -0.19
TVP23B-206ENST00000574226 IRF2P14316 349 aa13.89□□□□□ -0.19
TVP23B-206ENST00000574226 DDOSTP39656 456 aa13.89□□□□□ -0.19
TVP23B-206ENST00000574226 MZT1Q08AG7 82 aa13.89□□□□□ -0.19
TVP23B-206ENST00000574226 ZMYND11Q15326 602 aa13.89□□□□□ -0.19
TVP23B-206ENST00000574226 USP43Q70EL4 1123 aa13.89□□□□□ -0.19
TVP23B-206ENST00000574226 SHFQ7M4L6 423 aa13.89□□□□□ -0.19
TVP23B-206ENST00000574226 C1QL2Q7Z5L3 287 aa13.89□□□□□ -0.19
TVP23B-206ENST00000574226 SPATA24Q86W54 205 aa13.89□□□□□ -0.19
TVP23B-206ENST00000574226 SPERTQ8NA61 448 aa13.89□□□□□ -0.19
TVP23B-206ENST00000574226 PLPP7Q8NBV4 271 aa13.89□□□□□ -0.19
TVP23B-206ENST00000574226 BHLHE23Q8NDY6 225 aa13.89□□□□□ -0.19
TVP23B-206ENST00000574226 OR51L1Q8NGJ5 315 aa13.89□□□□□ -0.19
TVP23B-206ENST00000574226 OR10S1Q8NGN2 331 aa13.89□□□□□ -0.19
TVP23B-206ENST00000574226 DNAJC9Q8WXX5 260 aa13.89□□□□□ -0.19
TVP23B-206ENST00000574226 SLCO4A1Q96BD0 722 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms