RNA–Protein interactions for RNA: ENST00000564664.5

GTF3C1-204, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-204ENST00000564664 OR2T4Q8NH00 348 aa10.22□□□□□ -0.77
GTF3C1-204ENST00000564664 Q8TCH9 128 aa10.22□□□□□ -0.77
GTF3C1-204ENST00000564664 RAB40AQ8WXH6 277 aa10.22□□□□□ -0.77
GTF3C1-204ENST00000564664 NEIL1Q96FI4 390 aaPredicted RBP10.22□□□□□ -0.77
GTF3C1-204ENST00000564664 DDOQ99489 341 aa10.22□□□□□ -0.77
GTF3C1-204ENST00000564664 IL20Q9NYY1 176 aa10.22□□□□□ -0.77
GTF3C1-204ENST00000564664 ARL2BPQ9Y2Y0 163 aa10.22□□□□□ -0.77
GTF3C1-204ENST00000564664 PPIAL4AQ9Y536 164 aa10.22□□□□□ -0.77
GTF3C1-204ENST00000564664 DOCK11Q5JSL3 2073 aa10.22□□□□□ -0.77
GTF3C1-204ENST00000564664 KIR2DS1A0A191URI9 304 aa10.21□□□□□ -0.77
GTF3C1-204ENST00000564664 CLDN34H7C241 214 aa10.21□□□□□ -0.77
GTF3C1-204ENST00000564664 ARPC2O15144 300 aa10.21□□□□□ -0.77
GTF3C1-204ENST00000564664 MLNRO43193 412 aa10.21□□□□□ -0.77
GTF3C1-204ENST00000564664 GMDSO60547 372 aa10.21□□□□□ -0.77
GTF3C1-204ENST00000564664 DCTN3O75935 186 aa10.21□□□□□ -0.77
GTF3C1-204ENST00000564664 GPANK1O95872 356 aa10.21□□□□□ -0.77
GTF3C1-204ENST00000564664 LCATP04180 440 aa10.21□□□□□ -0.77
GTF3C1-204ENST00000564664 HKR1P10072 659 aa10.21□□□□□ -0.77
GTF3C1-204ENST00000564664 PRTN3P24158 256 aa10.21□□□□□ -0.77
GTF3C1-204ENST00000564664 CD80P33681 288 aa10.21□□□□□ -0.77
GTF3C1-204ENST00000564664 CD200P41217 278 aa10.21□□□□□ -0.77
GTF3C1-204ENST00000564664 MTNR1AP48039 350 aa10.21□□□□□ -0.77
GTF3C1-204ENST00000564664 BLVRAP53004 296 aa10.21□□□□□ -0.77
GTF3C1-204ENST00000564664 BPIFB3P59826 476 aa10.21□□□□□ -0.77
GTF3C1-204ENST00000564664 GNB2P62879 340 aa10.21□□□□□ -0.77
GTF3C1-204ENST00000564664 PAX2Q02962 417 aa10.21□□□□□ -0.77
GTF3C1-204ENST00000564664 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.21□□□□□ -0.77
GTF3C1-204ENST00000564664 MZT1Q08AG7 82 aa10.21□□□□□ -0.77
GTF3C1-204ENST00000564664 GK2Q14410 553 aaPredicted RBP10.21□□□□□ -0.77
GTF3C1-204ENST00000564664 KCNJ8Q15842 424 aa10.21□□□□□ -0.77
GTF3C1-204ENST00000564664 ZNF404Q494X3 552 aa10.21□□□□□ -0.77
GTF3C1-204ENST00000564664 OTPQ5XKR4 325 aa10.21□□□□□ -0.77
GTF3C1-204ENST00000564664 PGBD2Q6P3X8 592 aa10.21□□□□□ -0.77
GTF3C1-204ENST00000564664 CFAP77Q6ZQR2 320 aa10.21□□□□□ -0.77
GTF3C1-204ENST00000564664 C9orf139Q6ZV77 190 aa10.21□□□□□ -0.77
GTF3C1-204ENST00000564664 PGAP1Q75T13 922 aa10.21□□□□□ -0.77
GTF3C1-204ENST00000564664 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.21□□□□□ -0.77
GTF3C1-204ENST00000564664 MOGAT3Q86VF5 341 aa10.21□□□□□ -0.77
GTF3C1-204ENST00000564664 KLBQ86Z14 1044 aa10.21□□□□□ -0.77
GTF3C1-204ENST00000564664 ZDHHC21Q8IVQ6 265 aa10.21□□□□□ -0.77
GTF3C1-204ENST00000564664 ARHGAP24Q8N264 748 aa10.21□□□□□ -0.77
GTF3C1-204ENST00000564664 SPERTQ8NA61 448 aa10.21□□□□□ -0.77
GTF3C1-204ENST00000564664 OR10AD1Q8NGE0 317 aa10.21□□□□□ -0.77
GTF3C1-204ENST00000564664 OR8B3Q8NGG8 313 aa10.21□□□□□ -0.77
GTF3C1-204ENST00000564664 OR4C15Q8NGM1 316 aa10.21□□□□□ -0.77
GTF3C1-204ENST00000564664 SPRYD4Q8WW59 207 aaPredicted RBP10.21□□□□□ -0.77
GTF3C1-204ENST00000564664 OR8B2Q96RD0 313 aa10.21□□□□□ -0.77
GTF3C1-204ENST00000564664 TMEM246Q9BRR3 403 aa10.21□□□□□ -0.77
GTF3C1-204ENST00000564664 PLA2G12AQ9BZM1 189 aa10.21□□□□□ -0.77
GTF3C1-204ENST00000564664 FAM107BQ9H098 131 aa10.21□□□□□ -0.77
GTF3C1-204ENST00000564664 PNRC2Q9NPJ4 139 aaKnown RBP10.21□□□□□ -0.77
GTF3C1-204ENST00000564664 ESM1Q9NQ30 184 aa10.21□□□□□ -0.77
GTF3C1-204ENST00000564664 TRIM36Q9NQ86 728 aa10.21□□□□□ -0.77
GTF3C1-204ENST00000564664 BAIAP2Q9UQB8 552 aa10.21□□□□□ -0.77
GTF3C1-204ENST00000564664 CDH10Q9Y6N8 788 aa10.21□□□□□ -0.77
GTF3C1-204ENST00000564664 F5H5P2 479 aa10.2□□□□□ -0.78
GTF3C1-204ENST00000564664 H0YL77 283 aa10.2□□□□□ -0.78
GTF3C1-204ENST00000564664 TNFRSF11BO00300 401 aa10.2□□□□□ -0.78
GTF3C1-204ENST00000564664 NDUFA2O43678 99 aa10.2□□□□□ -0.78
GTF3C1-204ENST00000564664 CYB5R3P00387 301 aaPredicted RBP10.2□□□□□ -0.78
GTF3C1-204ENST00000564664 RPS2P15880 293 aaKnown RBP10.2□□□□□ -0.78
GTF3C1-204ENST00000564664 NPY4RP50391 375 aa10.2□□□□□ -0.78
GTF3C1-204ENST00000564664 RAD23AP54725 363 aa10.2□□□□□ -0.78
GTF3C1-204ENST00000564664 SEC61A1P61619 476 aaKnown RBP10.2□□□□□ -0.78
GTF3C1-204ENST00000564664 C11orf91Q3C1V1 193 aa10.2□□□□□ -0.78
GTF3C1-204ENST00000564664 KLF17Q5JT82 389 aaPredicted RBP10.2□□□□□ -0.78
GTF3C1-204ENST00000564664 TEX30Q5JUR7 227 aa10.2□□□□□ -0.78
GTF3C1-204ENST00000564664 DRAM2Q6UX65 266 aa10.2□□□□□ -0.78
GTF3C1-204ENST00000564664 DCDC5Q6ZRR9 648 aa10.2□□□□□ -0.78
GTF3C1-204ENST00000564664 RASSF6Q6ZTQ3 369 aa10.2□□□□□ -0.78
GTF3C1-204ENST00000564664 MRPL21Q7Z2W9 205 aaKnown RBP10.2□□□□□ -0.78
GTF3C1-204ENST00000564664 PIGWQ7Z7B1 504 aa10.2□□□□□ -0.78
GTF3C1-204ENST00000564664 LINC00346Q8IVM7 164 aa10.2□□□□□ -0.78
GTF3C1-204ENST00000564664 SIGLECL1Q8N7X8 197 aa10.2□□□□□ -0.78
GTF3C1-204ENST00000564664 SDR9C7Q8NEX9 313 aa10.2□□□□□ -0.78
GTF3C1-204ENST00000564664 ZNF420Q8TAQ5 688 aaPredicted RBP10.2□□□□□ -0.78
GTF3C1-204ENST00000564664 SLCO4A1Q96BD0 722 aa10.2□□□□□ -0.78
GTF3C1-204ENST00000564664 UPRTQ96BW1 309 aa10.2□□□□□ -0.78
GTF3C1-204ENST00000564664 MS4A7Q9GZW8 240 aaPredicted RBP10.2□□□□□ -0.78
GTF3C1-204ENST00000564664 OPA3Q9H6K4 179 aa10.2□□□□□ -0.78
GTF3C1-204ENST00000564664 MRPL22Q9NWU5 206 aaKnown RBP10.2□□□□□ -0.78
GTF3C1-204ENST00000564664 MRPL15Q9P015 296 aaKnown RBP10.2□□□□□ -0.78
GTF3C1-204ENST00000564664 ACTR3BQ9P1U1 418 aa10.2□□□□□ -0.78
GTF3C1-204ENST00000564664 ZNF69Q9UC07 566 aa10.2□□□□□ -0.78
GTF3C1-204ENST00000564664 LYVE1Q9Y5Y7 322 aa10.2□□□□□ -0.78
GTF3C1-204ENST00000564664 V9GYQ6 96 aa10.2□□□□□ -0.78
GTF3C1-204ENST00000564664 IGHV2-70DA0A0C4DH43 119 aa10.19□□□□□ -0.78
GTF3C1-204ENST00000564664 CD300LBA8K4G0 201 aa10.19□□□□□ -0.78
GTF3C1-204ENST00000564664 M0R135 149 aa10.19□□□□□ -0.78
GTF3C1-204ENST00000564664 BHLHE40O14503 412 aa10.19□□□□□ -0.78
GTF3C1-204ENST00000564664 PHYHO14832 338 aa10.19□□□□□ -0.78
GTF3C1-204ENST00000564664 PTBP3O95758 552 aaKnown RBP10.19□□□□□ -0.78
GTF3C1-204ENST00000564664 LIPFP07098 398 aa10.19□□□□□ -0.78
GTF3C1-204ENST00000564664 OTX1P32242 354 aaPredicted RBP10.19□□□□□ -0.78
GTF3C1-204ENST00000564664 MSX2P35548 267 aaPredicted RBP10.19□□□□□ -0.78
GTF3C1-204ENST00000564664 PMELP40967 661 aa10.19□□□□□ -0.78
GTF3C1-204ENST00000564664 CBX1P83916 185 aa10.19□□□□□ -0.78
GTF3C1-204ENST00000564664 BAMBIQ13145 260 aa10.19□□□□□ -0.78
GTF3C1-204ENST00000564664 MAB21L1Q13394 359 aa10.19□□□□□ -0.78
GTF3C1-204ENST00000564664 GK3PQ14409 553 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms