RNA–Protein interactions for RNA: ENST00000563739.5

SF3B3-204, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,105 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-204ENST00000563739 RNASEK-C17orf49H0YIS7 233 aa8.49□□□□□ -1.05
SF3B3-204ENST00000563739 SURF4O15260 269 aa8.49□□□□□ -1.05
SF3B3-204ENST00000563739 SGCEO43556 437 aa8.49□□□□□ -1.05
SF3B3-204ENST00000563739 OR10H3O60404 316 aa8.49□□□□□ -1.05
SF3B3-204ENST00000563739 DNAJC8O75937 253 aaPredicted RBP8.49□□□□□ -1.05
SF3B3-204ENST00000563739 PTBP3O95758 552 aaKnown RBP8.49□□□□□ -1.05
SF3B3-204ENST00000563739 COX4I1P13073 169 aa8.49□□□□□ -1.05
SF3B3-204ENST00000563739 CTLA4P16410 223 aa8.49□□□□□ -1.05
SF3B3-204ENST00000563739 TUBG1P23258 451 aa8.49□□□□□ -1.05
SF3B3-204ENST00000563739 CD200P41217 278 aa8.49□□□□□ -1.05
SF3B3-204ENST00000563739 KLRD1Q13241 179 aa8.49□□□□□ -1.05
SF3B3-204ENST00000563739 MESTQ5EB52 335 aa8.49□□□□□ -1.05
SF3B3-204ENST00000563739 DHRS7BQ6IAN0 325 aaPredicted RBP8.49□□□□□ -1.05
SF3B3-204ENST00000563739 C1orf94Q6P1W5 598 aa8.49□□□□□ -1.05
SF3B3-204ENST00000563739 GDPGP1Q6ZNW5 385 aa8.49□□□□□ -1.05
SF3B3-204ENST00000563739 COLCA1Q6ZS62 124 aa8.49□□□□□ -1.05
SF3B3-204ENST00000563739 NLRC3Q7RTR2 1065 aa8.49□□□□□ -1.05
SF3B3-204ENST00000563739 Q8N7P7 452 aa8.49□□□□□ -1.05
SF3B3-204ENST00000563739 ATG16L2Q8NAA4 619 aa8.49□□□□□ -1.05
SF3B3-204ENST00000563739 PCYOX1LQ8NBM8 494 aa8.49□□□□□ -1.05
SF3B3-204ENST00000563739 BHLHE23Q8NDY6 225 aa8.49□□□□□ -1.05
SF3B3-204ENST00000563739 RP9Q8TA86 221 aaKnown RBP8.49□□□□□ -1.05
SF3B3-204ENST00000563739 C17orf50Q8WW18 174 aa8.49□□□□□ -1.05
SF3B3-204ENST00000563739 TNFRSF14Q92956 283 aa8.49□□□□□ -1.05
SF3B3-204ENST00000563739 PTP4A1Q93096 173 aa8.49□□□□□ -1.05
SF3B3-204ENST00000563739 RCN3Q96D15 328 aa8.49□□□□□ -1.05
SF3B3-204ENST00000563739 TECTBQ96PL2 329 aa8.49□□□□□ -1.05
SF3B3-204ENST00000563739 TRIM15Q9C019 465 aa8.49□□□□□ -1.05
SF3B3-204ENST00000563739 WDR76Q9H967 626 aa8.49□□□□□ -1.05
SF3B3-204ENST00000563739 TUBG2Q9NRH3 451 aa8.49□□□□□ -1.05
SF3B3-204ENST00000563739 SERPINB7O75635 380 aa8.48□□□□□ -1.05
SF3B3-204ENST00000563739 ATP5HO75947 161 aa8.48□□□□□ -1.05
SF3B3-204ENST00000563739 NPPAP01160 153 aa8.48□□□□□ -1.05
SF3B3-204ENST00000563739 HIST1H2ABP04908 130 aa8.48□□□□□ -1.05
SF3B3-204ENST00000563739 RBM34P42696 430 aaKnown RBP8.48□□□□□ -1.05
SF3B3-204ENST00000563739 SRP9P49458 86 aaKnown RBP8.48□□□□□ -1.05
SF3B3-204ENST00000563739 PCBD1P61457 104 aa8.48□□□□□ -1.05
SF3B3-204ENST00000563739 ARF6P62330 175 aa8.48□□□□□ -1.05
SF3B3-204ENST00000563739 HIST1H3AP68431 136 aa8.48□□□□□ -1.05
SF3B3-204ENST00000563739 ALG10Q5BKT4 473 aa8.48□□□□□ -1.05
SF3B3-204ENST00000563739 INTS11Q5TA45 600 aaKnown RBP8.48□□□□□ -1.05
SF3B3-204ENST00000563739 HIST2H3PS2Q5TEC6 136 aa8.48□□□□□ -1.05
SF3B3-204ENST00000563739 FOXB2Q5VYV0 432 aa8.48□□□□□ -1.05
SF3B3-204ENST00000563739 HCP5Q6MZN7 132 aa8.48□□□□□ -1.05
SF3B3-204ENST00000563739 ARL9Q6T311 187 aa8.48□□□□□ -1.05
SF3B3-204ENST00000563739 C1orf122Q6ZSJ8 110 aa8.48□□□□□ -1.05
SF3B3-204ENST00000563739 HIST2H3AQ71DI3 136 aa8.48□□□□□ -1.05
SF3B3-204ENST00000563739 HIST3H2AQ7L7L0 130 aa8.48□□□□□ -1.05
SF3B3-204ENST00000563739 FAM122BQ7Z309 247 aa8.48□□□□□ -1.05
SF3B3-204ENST00000563739 HDDC2Q7Z4H3 204 aa8.48□□□□□ -1.05
SF3B3-204ENST00000563739 VMO1Q7Z5L0 202 aa8.48□□□□□ -1.05
SF3B3-204ENST00000563739 FAM90A1Q86YD7 464 aa8.48□□□□□ -1.05
SF3B3-204ENST00000563739 SLC30A8Q8IWU4 369 aa8.48□□□□□ -1.05
SF3B3-204ENST00000563739 ALDH16A1Q8IZ83 802 aa8.48□□□□□ -1.05
SF3B3-204ENST00000563739 KLHDC1Q8N7A1 406 aa8.48□□□□□ -1.05
SF3B3-204ENST00000563739 LY6G5BQ8NDX9 201 aa8.48□□□□□ -1.05
SF3B3-204ENST00000563739 OR8J3Q8NGG0 315 aa8.48□□□□□ -1.05
SF3B3-204ENST00000563739 OR13G1Q8NGZ3 307 aa8.48□□□□□ -1.05
SF3B3-204ENST00000563739 TMEM239Q8WW34 195 aa8.48□□□□□ -1.05
SF3B3-204ENST00000563739 HIST1H2ACQ93077 130 aa8.48□□□□□ -1.05
SF3B3-204ENST00000563739 PPP1R14AQ96A00 147 aa8.48□□□□□ -1.05
SF3B3-204ENST00000563739 ECSITQ9BQ95 431 aa8.48□□□□□ -1.05
SF3B3-204ENST00000563739 MMP28Q9H239 520 aa8.48□□□□□ -1.05
SF3B3-204ENST00000563739 KAT8Q9H7Z6 458 aaKnown RBP8.48□□□□□ -1.05
SF3B3-204ENST00000563739 CSMD3Q7Z407 3707 aa8.47□□□□□ -1.05
SF3B3-204ENST00000563739 TRAV27A0A087WT01 109 aa8.47□□□□□ -1.05
SF3B3-204ENST00000563739 C12orf71A8MTZ7 269 aa8.47□□□□□ -1.05
SF3B3-204ENST00000563739 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.47□□□□□ -1.05
SF3B3-204ENST00000563739 J3QW42 95 aa8.47□□□□□ -1.05
SF3B3-204ENST00000563739 LGALS8O00214 317 aa8.47□□□□□ -1.05
SF3B3-204ENST00000563739 RER1O15258 196 aa8.47□□□□□ -1.05
SF3B3-204ENST00000563739 AMY2BP19961 511 aa8.47□□□□□ -1.05
SF3B3-204ENST00000563739 PRDX6P30041 224 aa8.47□□□□□ -1.05
SF3B3-204ENST00000563739 NPY4RP50391 375 aa8.47□□□□□ -1.05
SF3B3-204ENST00000563739 NUDT2P50583 147 aa8.47□□□□□ -1.05
SF3B3-204ENST00000563739 CTXN1P60606 82 aa8.47□□□□□ -1.05
SF3B3-204ENST00000563739 SCRN3Q0VDG4 424 aa8.47□□□□□ -1.05
SF3B3-204ENST00000563739 PIN1Q13526 163 aaPredicted RBP8.47□□□□□ -1.05
SF3B3-204ENST00000563739 CYP51A1Q16850 503 aa8.47□□□□□ -1.05
SF3B3-204ENST00000563739 RABL3Q5HYI8 236 aa8.47□□□□□ -1.05
SF3B3-204ENST00000563739 SFRP4Q6FHJ7 346 aaPredicted RBP8.47□□□□□ -1.05
SF3B3-204ENST00000563739 NANOGP8Q6NSW7 305 aa8.47□□□□□ -1.05
SF3B3-204ENST00000563739 METAP1DQ6UB28 335 aaPredicted RBP8.47□□□□□ -1.05
SF3B3-204ENST00000563739 BTN2A1Q7KYR7 527 aa8.47□□□□□ -1.05
SF3B3-204ENST00000563739 GCSAMQ8N6F7 178 aa8.47□□□□□ -1.05
SF3B3-204ENST00000563739 C11orf65Q8NCR3 313 aa8.47□□□□□ -1.05
SF3B3-204ENST00000563739 RNF166Q96A37 237 aaPredicted RBP8.47□□□□□ -1.05
SF3B3-204ENST00000563739 CMTM5Q96DZ9 223 aa8.47□□□□□ -1.05
SF3B3-204ENST00000563739 UFSP2Q9NUQ7 469 aa8.47□□□□□ -1.05
SF3B3-204ENST00000563739 GID8Q9NWU2 228 aa8.47□□□□□ -1.05
SF3B3-204ENST00000563739 STX18Q9P2W9 335 aaKnown RBP8.47□□□□□ -1.05
SF3B3-204ENST00000563739 ATPIF1Q9UII2 106 aa8.47□□□□□ -1.05
SF3B3-204ENST00000563739 RPUSD1Q9UJJ7 312 aaKnown RBP8.47□□□□□ -1.05
SF3B3-204ENST00000563739 SLC13A4Q9UKG4 626 aa8.47□□□□□ -1.05
SF3B3-204ENST00000563739 ADAM18Q9Y3Q7 739 aa8.47□□□□□ -1.05
SF3B3-204ENST00000563739 LHFPL6Q9Y693 200 aa8.47□□□□□ -1.05
SF3B3-204ENST00000563739 RYR1P21817 5038 aa8.47□□□□□ -1.05
SF3B3-204ENST00000563739 PCLOQ9Y6V0 5065 aa8.47□□□□□ -1.05
SF3B3-204ENST00000563739 TEX13CA0A0J9YWL9 993 aa8.46□□□□□ -1.06
SF3B3-204ENST00000563739 ADAM20O43506 726 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms