RNA–Protein interactions for RNA: ENST00000562078.5

CLK3-206, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 2,455 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-206ENST00000562078 H3BSH0 61 aa11.93□□□□□ -0.5
CLK3-206ENST00000562078 CTAG2O75638 210 aa11.93□□□□□ -0.5
CLK3-206ENST00000562078 QDPRP09417 244 aa11.93□□□□□ -0.5
CLK3-206ENST00000562078 MAOAP21397 527 aa11.93□□□□□ -0.5
CLK3-206ENST00000562078 NANOS3P60323 173 aaKnown RBP11.93□□□□□ -0.5
CLK3-206ENST00000562078 HNRNPKP61978 463 aaKnown RBP eCLIP11.93□□□□□ -0.5
CLK3-206ENST00000562078 RPS23P62266 143 aaKnown RBP11.93□□□□□ -0.5
CLK3-206ENST00000562078 ZXDAP98168 799 aa11.93□□□□□ -0.5
CLK3-206ENST00000562078 PPP1R1AQ13522 171 aa11.93□□□□□ -0.5
CLK3-206ENST00000562078 MESTQ5EB52 335 aa11.93□□□□□ -0.5
CLK3-206ENST00000562078 GKN2Q86XP6 184 aa11.93□□□□□ -0.5
CLK3-206ENST00000562078 LRRC18Q8N456 261 aa11.93□□□□□ -0.5
CLK3-206ENST00000562078 BHLHE23Q8NDY6 225 aa11.93□□□□□ -0.5
CLK3-206ENST00000562078 BAHD1Q8TBE0 780 aaPredicted RBP11.93□□□□□ -0.5
CLK3-206ENST00000562078 DOK4Q8TEW6 326 aa11.93□□□□□ -0.5
CLK3-206ENST00000562078 MR1Q95460 341 aa11.93□□□□□ -0.5
CLK3-206ENST00000562078 NDUFAF3Q9BU61 184 aa11.93□□□□□ -0.5
CLK3-206ENST00000562078 PARP12Q9H0J9 701 aaKnown RBP11.93□□□□□ -0.5
CLK3-206ENST00000562078 AMDHD2Q9Y303 409 aa11.93□□□□□ -0.5
CLK3-206ENST00000562078 ETV7Q9Y603 341 aa11.93□□□□□ -0.5
CLK3-206ENST00000562078 ABCA7Q8IZY2 2146 aa11.92□□□□□ -0.5
CLK3-206ENST00000562078 C5orf51A6NDU8 294 aa11.92□□□□□ -0.5
CLK3-206ENST00000562078 METTL12A8MUP2 240 aa11.92□□□□□ -0.5
CLK3-206ENST00000562078 H0YIZ8 118 aa11.92□□□□□ -0.5
CLK3-206ENST00000562078 PPP1R2P9O14990 202 aa11.92□□□□□ -0.5
CLK3-206ENST00000562078 HIST1H2BKO60814 126 aa11.92□□□□□ -0.5
CLK3-206ENST00000562078 ZFPL1O95159 310 aa11.92□□□□□ -0.5
CLK3-206ENST00000562078 ZIC2O95409 532 aaPredicted RBP11.92□□□□□ -0.5
CLK3-206ENST00000562078 WNT11O96014 354 aa11.92□□□□□ -0.5
CLK3-206ENST00000562078 PDGFBP01127 241 aaPredicted RBP11.92□□□□□ -0.5
CLK3-206ENST00000562078 MAS1P04201 325 aa11.92□□□□□ -0.5
CLK3-206ENST00000562078 CRHP06850 196 aa11.92□□□□□ -0.5
CLK3-206ENST00000562078 HIST1H2BJP06899 126 aa11.92□□□□□ -0.5
CLK3-206ENST00000562078 MELTFP08582 738 aa11.92□□□□□ -0.5
CLK3-206ENST00000562078 CTSEP14091 401 aa11.92□□□□□ -0.5
CLK3-206ENST00000562078 RAB6AP20340 208 aa11.92□□□□□ -0.5
CLK3-206ENST00000562078 HIST1H2BOP23527 126 aa11.92□□□□□ -0.5
CLK3-206ENST00000562078 CD27P26842 260 aa11.92□□□□□ -0.5
CLK3-206ENST00000562078 HIST1H2BBP33778 126 aa11.92□□□□□ -0.5
CLK3-206ENST00000562078 PRSS3P35030 304 aa11.92□□□□□ -0.5
CLK3-206ENST00000562078 CD200P41217 278 aa11.92□□□□□ -0.5
CLK3-206ENST00000562078 HIST1H2BDP58876 126 aa11.92□□□□□ -0.5
CLK3-206ENST00000562078 HIST1H2BCP62807 126 aa11.92□□□□□ -0.5
CLK3-206ENST00000562078 HMGN3Q15651 99 aa11.92□□□□□ -0.5
CLK3-206ENST00000562078 HIST2H2BEQ16778 126 aa11.92□□□□□ -0.5
CLK3-206ENST00000562078 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.92□□□□□ -0.5
CLK3-206ENST00000562078 SLC16A11Q8NCK7 471 aa11.92□□□□□ -0.5
CLK3-206ENST00000562078 HIST1H2BHQ93079 126 aa11.92□□□□□ -0.5
CLK3-206ENST00000562078 NTNG2Q96CW9 530 aa11.92□□□□□ -0.5
CLK3-206ENST00000562078 YPEL4Q96NS1 127 aa11.92□□□□□ -0.5
CLK3-206ENST00000562078 OR5B2Q96R09 309 aa11.92□□□□□ -0.5
CLK3-206ENST00000562078 CD180Q99467 661 aa11.92□□□□□ -0.5
CLK3-206ENST00000562078 HIST1H2BNQ99877 126 aa11.92□□□□□ -0.5
CLK3-206ENST00000562078 HIST1H2BMQ99879 126 aa11.92□□□□□ -0.5
CLK3-206ENST00000562078 POTEKPQ9BYX7 375 aa11.92□□□□□ -0.5
CLK3-206ENST00000562078 VSIG4Q9Y279 399 aa11.92□□□□□ -0.5
CLK3-206ENST00000562078 KIR2DS5A0A0G2JLQ3 304 aa11.92□□□□□ -0.5
CLK3-206ENST00000562078 A0A0G2JNG1 304 aa11.92□□□□□ -0.5
CLK3-206ENST00000562078 A0A0J9YY10 115 aa11.92□□□□□ -0.5
CLK3-206ENST00000562078 OR5H15A6NDH6 313 aa11.92□□□□□ -0.5
CLK3-206ENST00000562078 OR5H1A6NKK0 313 aa11.92□□□□□ -0.5
CLK3-206ENST00000562078 B4DGG1 531 aa11.92□□□□□ -0.5
CLK3-206ENST00000562078 KIR2DS3K7RE56 304 aa11.92□□□□□ -0.5
CLK3-206ENST00000562078 OR2C1O95371 312 aa11.92□□□□□ -0.5
CLK3-206ENST00000562078 AK1P00568 194 aa11.92□□□□□ -0.5
CLK3-206ENST00000562078 ZNF10P21506 573 aaPredicted RBP11.92□□□□□ -0.5
CLK3-206ENST00000562078 MPZP25189 248 aa11.92□□□□□ -0.5
CLK3-206ENST00000562078 TLX1P31314 330 aaPredicted RBP11.92□□□□□ -0.5
CLK3-206ENST00000562078 IL2RGP31785 369 aa11.92□□□□□ -0.5
CLK3-206ENST00000562078 PDX1P52945 283 aa11.92□□□□□ -0.5
CLK3-206ENST00000562078 KIR2DS5Q14953 304 aa11.92□□□□□ -0.5
CLK3-206ENST00000562078 ZNF674Q2M3X9 581 aa11.92□□□□□ -0.5
CLK3-206ENST00000562078 MFSD12Q6NUT3 480 aa11.92□□□□□ -0.5
CLK3-206ENST00000562078 POMZP3Q6PJE2 187 aa11.92□□□□□ -0.5
CLK3-206ENST00000562078 CADM4Q8NFZ8 388 aa11.92□□□□□ -0.5
CLK3-206ENST00000562078 OR13C8Q8NGS7 320 aa11.92□□□□□ -0.5
CLK3-206ENST00000562078 OR13C2Q8NGS9 318 aa11.92□□□□□ -0.5
CLK3-206ENST00000562078 ADAMTS15Q8TE58 950 aa11.92□□□□□ -0.5
CLK3-206ENST00000562078 ROBO4Q8WZ75 1007 aa11.92□□□□□ -0.5
CLK3-206ENST00000562078 RSC1A1Q92681 617 aa11.92□□□□□ -0.5
CLK3-206ENST00000562078 CDS1Q92903 461 aa11.92□□□□□ -0.5
CLK3-206ENST00000562078 SLC35A4Q96G79 324 aa11.92□□□□□ -0.5
CLK3-206ENST00000562078 NKX3-1Q99801 234 aaPredicted RBP11.92□□□□□ -0.5
CLK3-206ENST00000562078 SLC25A21Q9BQT8 299 aaPredicted RBP11.92□□□□□ -0.5
CLK3-206ENST00000562078 CST11Q9H112 138 aa11.92□□□□□ -0.5
CLK3-206ENST00000562078 STARD5Q9NSY2 213 aa11.92□□□□□ -0.5
CLK3-206ENST00000562078 PLA2G2EQ9NZK7 142 aa11.92□□□□□ -0.5
CLK3-206ENST00000562078 HDGFL3Q9Y3E1 203 aa11.92□□□□□ -0.5
CLK3-206ENST00000562078 ENTPD2Q9Y5L3 495 aa11.92□□□□□ -0.5
CLK3-206ENST00000562078 SDK1Q7Z5N4 2213 aa11.91□□□□□ -0.5
CLK3-206ENST00000562078 TRAV27A0A087WT01 109 aa11.91□□□□□ -0.5
CLK3-206ENST00000562078 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.91□□□□□ -0.5
CLK3-206ENST00000562078 RIIAD1A6NNX1 92 aa11.91□□□□□ -0.5
CLK3-206ENST00000562078 ZNF587BE7ETH6 402 aa11.91□□□□□ -0.5
CLK3-206ENST00000562078 K7ESF4 209 aa11.91□□□□□ -0.5
CLK3-206ENST00000562078 TOX3O15405 576 aaPredicted RBP11.91□□□□□ -0.5
CLK3-206ENST00000562078 FCMRO60667 390 aa11.91□□□□□ -0.5
CLK3-206ENST00000562078 LDB3O75112 727 aa11.91□□□□□ -0.5
CLK3-206ENST00000562078 PLGP00747 810 aaPredicted RBP11.91□□□□□ -0.5
CLK3-206ENST00000562078 ZBTB25P24278 435 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms