RNA–Protein interactions for RNA: ENST00000560715.5

TSPAN3-209, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 2,892 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-209ENST00000560715 NUDT4Q9NZJ9 180 aa6□□□□□ -1.45
TSPAN3-209ENST00000560715 IL17BQ9UHF5 180 aa6□□□□□ -1.45
TSPAN3-209ENST00000560715 FBXL4Q9UKA2 621 aa6□□□□□ -1.45
TSPAN3-209ENST00000560715 MRPS18CQ9Y3D5 142 aaKnown RBP6□□□□□ -1.45
TSPAN3-209ENST00000560715 A0A0G2JK05 382 aa6□□□□□ -1.45
TSPAN3-209ENST00000560715 MYBPHLA2RUH7 354 aa6□□□□□ -1.45
TSPAN3-209ENST00000560715 B5MCH6 92 aa6□□□□□ -1.45
TSPAN3-209ENST00000560715 MATN3O15232 486 aa6□□□□□ -1.45
TSPAN3-209ENST00000560715 OPN1SWP03999 348 aa6□□□□□ -1.45
TSPAN3-209ENST00000560715 OR12D1P0DN82 309 aa6□□□□□ -1.45
TSPAN3-209ENST00000560715 SRD5A1P18405 259 aa6□□□□□ -1.45
TSPAN3-209ENST00000560715 IGFBP6P24592 240 aaPredicted RBP6□□□□□ -1.45
TSPAN3-209ENST00000560715 PPIFP30405 207 aaKnown RBP6□□□□□ -1.45
TSPAN3-209ENST00000560715 CD52P31358 61 aa6□□□□□ -1.45
TSPAN3-209ENST00000560715 OMPP47874 163 aa6□□□□□ -1.45
TSPAN3-209ENST00000560715 CEBPDP49716 269 aaPredicted RBP6□□□□□ -1.45
TSPAN3-209ENST00000560715 STC1P52823 247 aa6□□□□□ -1.45
TSPAN3-209ENST00000560715 OR10A3P58181 314 aa6□□□□□ -1.45
TSPAN3-209ENST00000560715 SIRPAP78324 504 aa6□□□□□ -1.45
TSPAN3-209ENST00000560715 MRPS34P82930 218 aaKnown RBP6□□□□□ -1.45
TSPAN3-209ENST00000560715 ACVR1Q04771 509 aa6□□□□□ -1.45
TSPAN3-209ENST00000560715 LINC00303Q3SY05 128 aa6□□□□□ -1.45
TSPAN3-209ENST00000560715 SDHAF4Q5VUM1 108 aa6□□□□□ -1.45
TSPAN3-209ENST00000560715 ADAM5Q6NVV9 412 aa6□□□□□ -1.45
TSPAN3-209ENST00000560715 OR51S1Q8NGJ8 323 aa6□□□□□ -1.45
TSPAN3-209ENST00000560715 OR5R1Q8NH85 324 aa6□□□□□ -1.45
TSPAN3-209ENST00000560715 NDRG1Q92597 394 aaKnown RBP6□□□□□ -1.45
TSPAN3-209ENST00000560715 MAL2Q969L2 176 aa6□□□□□ -1.45
TSPAN3-209ENST00000560715 MOAP1Q96BY2 351 aa6□□□□□ -1.45
TSPAN3-209ENST00000560715 ARSGQ96EG1 525 aa6□□□□□ -1.45
TSPAN3-209ENST00000560715 AMDHD1Q96NU7 426 aa6□□□□□ -1.45
TSPAN3-209ENST00000560715 TSSK3Q96PN8 268 aa6□□□□□ -1.45
TSPAN3-209ENST00000560715 SEPT5Q99719 369 aaPredicted RBP6□□□□□ -1.45
TSPAN3-209ENST00000560715 ULBP1Q9BZM6 244 aa6□□□□□ -1.45
TSPAN3-209ENST00000560715 ATG10Q9H0Y0 220 aa6□□□□□ -1.45
TSPAN3-209ENST00000560715 GAL3ST2Q9H3Q3 398 aa6□□□□□ -1.45
TSPAN3-209ENST00000560715 TMEM27Q9HBJ8 222 aa6□□□□□ -1.45
TSPAN3-209ENST00000560715 APMAPQ9HDC9 416 aa6□□□□□ -1.45
TSPAN3-209ENST00000560715 RPS10P5Q9NQ39 176 aa6□□□□□ -1.45
TSPAN3-209ENST00000560715 MEPEQ9NQ76 525 aaPredicted RBP6□□□□□ -1.45
TSPAN3-209ENST00000560715 MED17Q9NVC6 651 aa6□□□□□ -1.45
TSPAN3-209ENST00000560715 WNT16Q9UBV4 365 aa6□□□□□ -1.45
TSPAN3-209ENST00000560715 ABT1Q9ULW3 272 aaKnown RBP6□□□□□ -1.45
TSPAN3-209ENST00000560715 ALPK3Q96L96 1907 aa6□□□□□ -1.45
TSPAN3-209ENST00000560715 CASTOR2A6NHX0 329 aa5.99□□□□□ -1.45
TSPAN3-209ENST00000560715 IDSB3KWA1 339 aa5.99□□□□□ -1.45
TSPAN3-209ENST00000560715 HHLA1C9JL84 531 aa5.99□□□□□ -1.45
TSPAN3-209ENST00000560715 SULT2B1O00204 365 aa5.99□□□□□ -1.45
TSPAN3-209ENST00000560715 HOXA3O43365 443 aaPredicted RBP5.99□□□□□ -1.45
TSPAN3-209ENST00000560715 LDB2O43679 373 aa5.99□□□□□ -1.45
TSPAN3-209ENST00000560715 REM1O75628 298 aa5.99□□□□□ -1.45
TSPAN3-209ENST00000560715 SERPINA5P05154 406 aa5.99□□□□□ -1.45
TSPAN3-209ENST00000560715 SERPIND1P05546 499 aa5.99□□□□□ -1.45
TSPAN3-209ENST00000560715 NPSP0C0P6 89 aa5.99□□□□□ -1.45
TSPAN3-209ENST00000560715 SFTA3P0C7M3 94 aa5.99□□□□□ -1.45
TSPAN3-209ENST00000560715 BMP7P18075 431 aa5.99□□□□□ -1.45
TSPAN3-209ENST00000560715 TWF1Q12792 350 aa5.99□□□□□ -1.45
TSPAN3-209ENST00000560715 KIAA0141Q14154 515 aaPredicted RBP5.99□□□□□ -1.45
TSPAN3-209ENST00000560715 TGIF1Q15583 401 aa5.99□□□□□ -1.45
TSPAN3-209ENST00000560715 ZNF630Q2M218 657 aaPredicted RBP5.99□□□□□ -1.45
TSPAN3-209ENST00000560715 C18orf21Q32NC0 220 aaPredicted RBP5.99□□□□□ -1.45
TSPAN3-209ENST00000560715 ACSM5Q6NUN0 579 aa5.99□□□□□ -1.45
TSPAN3-209ENST00000560715 SLC36A1Q7Z2H8 476 aa5.99□□□□□ -1.45
TSPAN3-209ENST00000560715 CTU1Q7Z7A3 348 aaKnown RBP5.99□□□□□ -1.45
TSPAN3-209ENST00000560715 ADGRE4PQ86SQ3 457 aa5.99□□□□□ -1.45
TSPAN3-209ENST00000560715 RANBP3LQ86VV4 465 aaPredicted RBP5.99□□□□□ -1.45
TSPAN3-209ENST00000560715 PAQR8Q8TEZ7 354 aa5.99□□□□□ -1.45
TSPAN3-209ENST00000560715 ST8SIA1Q92185 356 aa5.99□□□□□ -1.45
TSPAN3-209ENST00000560715 PHYHIPQ92561 330 aa5.99□□□□□ -1.45
TSPAN3-209ENST00000560715 CPNE2Q96FN4 548 aaPredicted RBP5.99□□□□□ -1.45
TSPAN3-209ENST00000560715 CACFD1Q9UGQ2 172 aa5.99□□□□□ -1.45
TSPAN3-209ENST00000560715 TIMM10BQ9Y5J6 103 aa5.99□□□□□ -1.45
TSPAN3-209ENST00000560715 ENPP4Q9Y6X5 453 aa5.99□□□□□ -1.45
TSPAN3-209ENST00000560715 YJEFN3A6XGL0 299 aa5.99□□□□□ -1.45
TSPAN3-209ENST00000560715 RPL36A-HNRNPH2H7BZ11 118 aa5.99□□□□□ -1.45
TSPAN3-209ENST00000560715 MANBAO00462 879 aa5.99□□□□□ -1.45
TSPAN3-209ENST00000560715 FCMRO60667 390 aa5.99□□□□□ -1.45
TSPAN3-209ENST00000560715 RFPL3SP0C7P2 107 aa5.99□□□□□ -1.45
TSPAN3-209ENST00000560715 AKR1C3P42330 323 aa5.99□□□□□ -1.45
TSPAN3-209ENST00000560715 RGNQ15493 299 aa5.99□□□□□ -1.45
TSPAN3-209ENST00000560715 ELAVL1Q15717 326 aaKnown RBP5.99□□□□□ -1.45
TSPAN3-209ENST00000560715 AGBL4Q5VU57 503 aa5.99□□□□□ -1.45
TSPAN3-209ENST00000560715 MFSD12Q6NUT3 480 aa5.99□□□□□ -1.45
TSPAN3-209ENST00000560715 SMARCD3Q6STE5 483 aa5.99□□□□□ -1.45
TSPAN3-209ENST00000560715 DHRS13Q6UX07 377 aa5.99□□□□□ -1.45
TSPAN3-209ENST00000560715 LRRC75A-AS1Q8N1F1 130 aa5.99□□□□□ -1.45
TSPAN3-209ENST00000560715 EID2Q8N6I1 236 aa5.99□□□□□ -1.45
TSPAN3-209ENST00000560715 EXD3Q8N9H8 876 aa5.99□□□□□ -1.45
TSPAN3-209ENST00000560715 CPEB3Q8NE35 698 aaKnown RBP5.99□□□□□ -1.45
TSPAN3-209ENST00000560715 MRPS31Q92665 395 aaKnown RBP5.99□□□□□ -1.45
TSPAN3-209ENST00000560715 DAZLQ92904 295 aaKnown RBP5.99□□□□□ -1.45
TSPAN3-209ENST00000560715 TM4SF18Q96CE8 201 aa5.99□□□□□ -1.45
TSPAN3-209ENST00000560715 GRAMD2BQ96HH9 432 aa5.99□□□□□ -1.45
TSPAN3-209ENST00000560715 MRPL13Q9BYD1 178 aaKnown RBP5.99□□□□□ -1.45
TSPAN3-209ENST00000560715 POLR2J3Q9H1A7 115 aaKnown RBP5.99□□□□□ -1.45
TSPAN3-209ENST00000560715 Q9N2K0 584 aa5.99□□□□□ -1.45
TSPAN3-209ENST00000560715 KRCC1Q9NPI7 259 aaPredicted RBP5.99□□□□□ -1.45
TSPAN3-209ENST00000560715 MRPL17Q9NRX2 175 aaKnown RBP5.99□□□□□ -1.45
TSPAN3-209ENST00000560715 TNFSF18Q9UNG2 199 aa5.99□□□□□ -1.45
TSPAN3-209ENST00000560715 ASF1AQ9Y294 204 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms