RNA–Protein interactions for RNA: ENST00000558218.5

USP3-207, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-207ENST00000558218 PHC2Q8IXK0 858 aa8.54□□□□□ -1.04
USP3-207ENST00000558218 MUC20Q8N307 709 aaPredicted RBP8.54□□□□□ -1.04
USP3-207ENST00000558218 KLHL36Q8N4N3 616 aa8.54□□□□□ -1.04
USP3-207ENST00000558218 SPICQ8N5J4 248 aa8.54□□□□□ -1.04
USP3-207ENST00000558218 CELF2-AS1Q8N7Q2 184 aa8.54□□□□□ -1.04
USP3-207ENST00000558218 OR2T33Q8NG76 320 aa8.54□□□□□ -1.04
USP3-207ENST00000558218 OR4M2Q8NGB6 313 aa8.54□□□□□ -1.04
USP3-207ENST00000558218 ST7LQ8TDW4 575 aa8.54□□□□□ -1.04
USP3-207ENST00000558218 ZFAND2BQ8WV99 257 aa8.54□□□□□ -1.04
USP3-207ENST00000558218 SLC7A6Q92536 515 aa8.54□□□□□ -1.04
USP3-207ENST00000558218 SPTSSAQ969W0 71 aa8.54□□□□□ -1.04
USP3-207ENST00000558218 ERGIC1Q969X5 290 aa8.54□□□□□ -1.04
USP3-207ENST00000558218 FAHD2AQ96GK7 314 aa8.54□□□□□ -1.04
USP3-207ENST00000558218 LRGUKQ96M69 825 aa8.54□□□□□ -1.04
USP3-207ENST00000558218 GAL3ST1Q99999 423 aa8.54□□□□□ -1.04
USP3-207ENST00000558218 SLC30A2Q9BRI3 323 aa8.54□□□□□ -1.04
USP3-207ENST00000558218 BTBD10Q9BSF8 475 aa8.54□□□□□ -1.04
USP3-207ENST00000558218 SLC22A4Q9H015 551 aa8.54□□□□□ -1.04
USP3-207ENST00000558218 NARFLQ9H6Q4 476 aa8.54□□□□□ -1.04
USP3-207ENST00000558218 EGLN3Q9H6Z9 239 aa8.54□□□□□ -1.04
USP3-207ENST00000558218 DDX28Q9NUL7 540 aaKnown RBP8.54□□□□□ -1.04
USP3-207ENST00000558218 TMEM100Q9NV29 134 aa8.54□□□□□ -1.04
USP3-207ENST00000558218 PPP1R3CQ9UQK1 317 aa8.54□□□□□ -1.04
USP3-207ENST00000558218 NOP16Q9Y3C1 178 aaKnown RBP8.54□□□□□ -1.04
USP3-207ENST00000558218 SAMHD1Q9Y3Z3 626 aaKnown RBP8.54□□□□□ -1.04
USP3-207ENST00000558218 CACNG2Q9Y698 323 aa8.54□□□□□ -1.04
USP3-207ENST00000558218 ANK3Q12955 4377 aaKnown RBP8.53□□□□□ -1.04
USP3-207ENST00000558218 F5H5K5 113 aa8.53□□□□□ -1.04
USP3-207ENST00000558218 ACOT8O14734 319 aa8.53□□□□□ -1.04
USP3-207ENST00000558218 IFNGP01579 166 aa8.53□□□□□ -1.04
USP3-207ENST00000558218 IGHV2-70P01814 119 aa8.53□□□□□ -1.04
USP3-207ENST00000558218 DBHP09172 617 aa8.53□□□□□ -1.04
USP3-207ENST00000558218 ACSM4P0C7M7 580 aa8.53□□□□□ -1.04
USP3-207ENST00000558218 FMO3P31513 532 aa8.53□□□□□ -1.04
USP3-207ENST00000558218 MEP1BQ16820 701 aa8.53□□□□□ -1.04
USP3-207ENST00000558218 CLEC12AQ5QGZ9 265 aa8.53□□□□□ -1.04
USP3-207ENST00000558218 SLC35F1Q5T1Q4 408 aa8.53□□□□□ -1.04
USP3-207ENST00000558218 SHQ1Q6PI26 577 aaKnown RBP8.53□□□□□ -1.04
USP3-207ENST00000558218 CORO6Q6QEF8 472 aa8.53□□□□□ -1.04
USP3-207ENST00000558218 CFAP77Q6ZQR2 320 aa8.53□□□□□ -1.04
USP3-207ENST00000558218 RINLQ6ZS11 566 aa8.53□□□□□ -1.04
USP3-207ENST00000558218 IL17RELQ6ZVW7 336 aa8.53□□□□□ -1.04
USP3-207ENST00000558218 USP43Q70EL4 1123 aa8.53□□□□□ -1.04
USP3-207ENST00000558218 ATG16L2Q8NAA4 619 aa8.53□□□□□ -1.04
USP3-207ENST00000558218 AQP11Q8NBQ7 271 aa8.53□□□□□ -1.04
USP3-207ENST00000558218 SDR9C7Q8NEX9 313 aa8.53□□□□□ -1.04
USP3-207ENST00000558218 RBM4Q9BWF3 364 aaKnown RBP8.53□□□□□ -1.04
USP3-207ENST00000558218 TSSK6Q9BXA6 273 aa8.53□□□□□ -1.04
USP3-207ENST00000558218 NMNAT2Q9BZQ4 307 aa8.53□□□□□ -1.04
USP3-207ENST00000558218 POFUT1Q9H488 388 aa8.53□□□□□ -1.04
USP3-207ENST00000558218 GCM1Q9NP62 436 aa8.53□□□□□ -1.04
USP3-207ENST00000558218 PNRC2Q9NPJ4 139 aaKnown RBP8.53□□□□□ -1.04
USP3-207ENST00000558218 MRPL22Q9NWU5 206 aaKnown RBP8.53□□□□□ -1.04
USP3-207ENST00000558218 PCDHB10Q9UN67 800 aa8.53□□□□□ -1.04
USP3-207ENST00000558218 WNK2Q9Y3S1 2297 aa8.53□□□□□ -1.04
USP3-207ENST00000558218 LRRC30A6NM36 301 aa8.52□□□□□ -1.05
USP3-207ENST00000558218 TMEM178BH3BS89 294 aa8.52□□□□□ -1.05
USP3-207ENST00000558218 EREGO14944 169 aa8.52□□□□□ -1.05
USP3-207ENST00000558218 GPANK1O95872 356 aa8.52□□□□□ -1.05
USP3-207ENST00000558218 APOC1P02654 83 aa8.52□□□□□ -1.05
USP3-207ENST00000558218 LCATP04180 440 aa8.52□□□□□ -1.05
USP3-207ENST00000558218 SBK2P0C263 348 aa8.52□□□□□ -1.05
USP3-207ENST00000558218 OTX1P32242 354 aaPredicted RBP8.52□□□□□ -1.05
USP3-207ENST00000558218 MDH2P40926 338 aaKnown RBP8.52□□□□□ -1.05
USP3-207ENST00000558218 SLC15A1P46059 708 aa8.52□□□□□ -1.05
USP3-207ENST00000558218 SLC6A9P48067 706 aa8.52□□□□□ -1.05
USP3-207ENST00000558218 BTG1P62324 171 aa8.52□□□□□ -1.05
USP3-207ENST00000558218 GK2Q14410 553 aaPredicted RBP8.52□□□□□ -1.05
USP3-207ENST00000558218 HLXQ14774 488 aaPredicted RBP8.52□□□□□ -1.05
USP3-207ENST00000558218 KRTAP24-1Q3LI83 254 aa8.52□□□□□ -1.05
USP3-207ENST00000558218 DNAL1Q4LDG9 190 aa8.52□□□□□ -1.05
USP3-207ENST00000558218 DCAF12L2Q5VW00 463 aa8.52□□□□□ -1.05
USP3-207ENST00000558218 OR2T2Q6IF00 324 aa8.52□□□□□ -1.05
USP3-207ENST00000558218 DRAM2Q6UX65 266 aa8.52□□□□□ -1.05
USP3-207ENST00000558218 KLBQ86Z14 1044 aa8.52□□□□□ -1.05
USP3-207ENST00000558218 C1orf87Q8N0U7 546 aa8.52□□□□□ -1.05
USP3-207ENST00000558218 SLC37A3Q8NCC5 494 aa8.52□□□□□ -1.05
USP3-207ENST00000558218 PROKR2Q8NFJ6 384 aa8.52□□□□□ -1.05
USP3-207ENST00000558218 OR9Q2Q8NGE9 314 aa8.52□□□□□ -1.05
USP3-207ENST00000558218 NANPQ8TBE9 248 aa8.52□□□□□ -1.05
USP3-207ENST00000558218 ITLN1Q8WWA0 313 aa8.52□□□□□ -1.05
USP3-207ENST00000558218 WFDC12Q8WWY7 111 aa8.52□□□□□ -1.05
USP3-207ENST00000558218 MAP6Q96JE9 813 aa8.52□□□□□ -1.05
USP3-207ENST00000558218 OR2V2Q96R30 315 aa8.52□□□□□ -1.05
USP3-207ENST00000558218 SIGLEC11Q96RL6 698 aa8.52□□□□□ -1.05
USP3-207ENST00000558218 JMJD8Q96S16 334 aa8.52□□□□□ -1.05
USP3-207ENST00000558218 CHID1Q9BWS9 393 aa8.52□□□□□ -1.05
USP3-207ENST00000558218 METTL17Q9H7H0 456 aaPredicted RBP8.52□□□□□ -1.05
USP3-207ENST00000558218 YY1AP1Q9H869 796 aa8.52□□□□□ -1.05
USP3-207ENST00000558218 SP140LQ9H930 580 aa8.52□□□□□ -1.05
USP3-207ENST00000558218 PATZ1Q9HBE1 687 aaKnown RBP8.52□□□□□ -1.05
USP3-207ENST00000558218 LPAR2Q9HBW0 351 aa8.52□□□□□ -1.05
USP3-207ENST00000558218 TBC1D23Q9NUY8 699 aa8.52□□□□□ -1.05
USP3-207ENST00000558218 FAM53CQ9NYF3 392 aa8.52□□□□□ -1.05
USP3-207ENST00000558218 PTTG3PQ9NZH4 202 aa8.52□□□□□ -1.05
USP3-207ENST00000558218 ISPDA4D126 451 aa8.51□□□□□ -1.05
USP3-207ENST00000558218 RIIAD1A6NNX1 92 aa8.51□□□□□ -1.05
USP3-207ENST00000558218 A8MXK9 166 aa8.51□□□□□ -1.05
USP3-207ENST00000558218 M0R135 149 aa8.51□□□□□ -1.05
USP3-207ENST00000558218 ZNF593O00488 134 aaPredicted RBP8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms