RNA–Protein interactions for RNA: ENST00000557539.1

MTHFD1-216, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 4

Gene MTHFD1, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-216ENST00000557539 SRXN1Q9BYN0 137 aa3.76□□□□□ -1.81
MTHFD1-216ENST00000557539 MRPL37Q9BZE1 423 aaKnown RBP3.76□□□□□ -1.81
MTHFD1-216ENST00000557539 OR2AG1Q9H205 316 aa3.76□□□□□ -1.81
MTHFD1-216ENST00000557539 NEUROG2Q9H2A3 272 aa3.76□□□□□ -1.81
MTHFD1-216ENST00000557539 RNF167Q9H6Y7 350 aa3.76□□□□□ -1.81
MTHFD1-216ENST00000557539 SAMSN1Q9NSI8 373 aaKnown RBP3.76□□□□□ -1.81
MTHFD1-216ENST00000557539 GIN1Q9NXP7 522 aa3.76□□□□□ -1.81
MTHFD1-216ENST00000557539 IL17CQ9P0M4 197 aa3.76□□□□□ -1.81
MTHFD1-216ENST00000557539 CLN8Q9UBY8 286 aa3.76□□□□□ -1.81
MTHFD1-216ENST00000557539 UBQLN1Q9UMX0 589 aaKnown RBP3.76□□□□□ -1.81
MTHFD1-216ENST00000557539 CADP27708 2225 aa3.76□□□□□ -1.81
MTHFD1-216ENST00000557539 NUMA1Q14980 2115 aa3.76□□□□□ -1.81
MTHFD1-216ENST00000557539 IGLV3-22A0A075B6J6 115 aa3.75□□□□□ -1.81
MTHFD1-216ENST00000557539 SERPINE3A8MV23 424 aa3.75□□□□□ -1.81
MTHFD1-216ENST00000557539 DYNC1I1O14576 645 aa3.75□□□□□ -1.81
MTHFD1-216ENST00000557539 GALR3O60755 368 aaPredicted RBP3.75□□□□□ -1.81
MTHFD1-216ENST00000557539 CCNB2O95067 398 aa3.75□□□□□ -1.81
MTHFD1-216ENST00000557539 IVLP07476 585 aa3.75□□□□□ -1.81
MTHFD1-216ENST00000557539 OR8U8P0C7N1 319 aa3.75□□□□□ -1.81
MTHFD1-216ENST00000557539 PGAM2P15259 253 aa3.75□□□□□ -1.81
MTHFD1-216ENST00000557539 CD151P48509 253 aa3.75□□□□□ -1.81
MTHFD1-216ENST00000557539 ATP12AP54707 1039 aa3.75□□□□□ -1.81
MTHFD1-216ENST00000557539 YWHAGP61981 247 aaKnown RBP eCLIP3.75□□□□□ -1.81
MTHFD1-216ENST00000557539 IRX1P78414 480 aaPredicted RBP3.75□□□□□ -1.81
MTHFD1-216ENST00000557539 QRICH1Q2TAL8 776 aa3.75□□□□□ -1.81
MTHFD1-216ENST00000557539 PARP15Q460N3 678 aa3.75□□□□□ -1.81
MTHFD1-216ENST00000557539 XKR4Q5GH76 650 aa3.75□□□□□ -1.81
MTHFD1-216ENST00000557539 TRIM40Q6P9F5 258 aa3.75□□□□□ -1.81
MTHFD1-216ENST00000557539 DNM1P46Q6ZS02 220 aa3.75□□□□□ -1.81
MTHFD1-216ENST00000557539 GDPD3Q7L5L3 318 aa3.75□□□□□ -1.81
MTHFD1-216ENST00000557539 ARCQ7LC44 396 aa3.75□□□□□ -1.81
MTHFD1-216ENST00000557539 SLC25A42Q86VD7 318 aa3.75□□□□□ -1.81
MTHFD1-216ENST00000557539 SKA3Q8IX90 412 aa3.75□□□□□ -1.81
MTHFD1-216ENST00000557539 ZNF100Q8IYN0 542 aa3.75□□□□□ -1.81
MTHFD1-216ENST00000557539 PRR22Q8IZ63 422 aa3.75□□□□□ -1.81
MTHFD1-216ENST00000557539 Q8N377 158 aa3.75□□□□□ -1.81
MTHFD1-216ENST00000557539 LIX1Q8N485 282 aa3.75□□□□□ -1.81
MTHFD1-216ENST00000557539 CSGALNACT2Q8N6G5 542 aa3.75□□□□□ -1.81
MTHFD1-216ENST00000557539 FBXL13Q8NEE6 735 aa3.75□□□□□ -1.81
MTHFD1-216ENST00000557539 OR5T3Q8NGG3 340 aa3.75□□□□□ -1.81
MTHFD1-216ENST00000557539 SLC7A13Q8TCU3 470 aa3.75□□□□□ -1.81
MTHFD1-216ENST00000557539 CAPSLQ8WWF8 208 aa3.75□□□□□ -1.81
MTHFD1-216ENST00000557539 RXFP2Q8WXD0 754 aa3.75□□□□□ -1.81
MTHFD1-216ENST00000557539 PIBF1Q8WXW3 757 aa3.75□□□□□ -1.81
MTHFD1-216ENST00000557539 ASB9Q96DX5 294 aa3.75□□□□□ -1.81
MTHFD1-216ENST00000557539 LINC00479Q96M42 142 aa3.75□□□□□ -1.81
MTHFD1-216ENST00000557539 ADAP2Q9NPF8 381 aa3.75□□□□□ -1.81
MTHFD1-216ENST00000557539 MYEF2Q9P2K5 600 aaKnown RBP3.75□□□□□ -1.81
MTHFD1-216ENST00000557539 BZW2Q9Y6E2 419 aaKnown RBP3.75□□□□□ -1.81
MTHFD1-216ENST00000557539 ZNF638Q14966 1978 aaKnown RBP3.74□□□□□ -1.81
MTHFD1-216ENST00000557539 KCNE1BA0A087WTH5 132 aa3.74□□□□□ -1.81
MTHFD1-216ENST00000557539 TRBV9A0A0B4J1U6 114 aa3.74□□□□□ -1.81
MTHFD1-216ENST00000557539 A0A0J9YYE9 177 aa3.74□□□□□ -1.81
MTHFD1-216ENST00000557539 D6RAR5 112 aa3.74□□□□□ -1.81
MTHFD1-216ENST00000557539 M0R3G1 203 aa3.74□□□□□ -1.81
MTHFD1-216ENST00000557539 NDUFAB1O14561 156 aa3.74□□□□□ -1.81
MTHFD1-216ENST00000557539 GPAA1O43292 621 aa3.74□□□□□ -1.81
MTHFD1-216ENST00000557539 DUSP14O95147 198 aaKnown RBP3.74□□□□□ -1.81
MTHFD1-216ENST00000557539 CLIC3O95833 236 aa3.74□□□□□ -1.81
MTHFD1-216ENST00000557539 NPPAP01160 153 aa3.74□□□□□ -1.81
MTHFD1-216ENST00000557539 TRBC1P01850 177 aa3.74□□□□□ -1.81
MTHFD1-216ENST00000557539 ALDOBP05062 364 aa3.74□□□□□ -1.81
MTHFD1-216ENST00000557539 FGF1P05230 155 aa3.74□□□□□ -1.81
MTHFD1-216ENST00000557539 IGHV4-34P06331 123 aa3.74□□□□□ -1.81
MTHFD1-216ENST00000557539 SERPINE2P07093 398 aa3.74□□□□□ -1.81
MTHFD1-216ENST00000557539 CCL4P13236 92 aa3.74□□□□□ -1.81
MTHFD1-216ENST00000557539 IGLL1P15814 213 aa3.74□□□□□ -1.81
MTHFD1-216ENST00000557539 RGRP47804 291 aa3.74□□□□□ -1.81
MTHFD1-216ENST00000557539 CRIP2P52943 208 aaPredicted RBP3.74□□□□□ -1.81
MTHFD1-216ENST00000557539 GPX6P59796 221 aa3.74□□□□□ -1.81
MTHFD1-216ENST00000557539 ERVK-25P63136 954 aa3.74□□□□□ -1.81
MTHFD1-216ENST00000557539 MS4A2Q01362 244 aa3.74□□□□□ -1.81
MTHFD1-216ENST00000557539 RAD51Q06609 339 aa3.74□□□□□ -1.81
MTHFD1-216ENST00000557539 ZFP36L1Q07352 338 aaKnown RBP3.74□□□□□ -1.81
MTHFD1-216ENST00000557539 CD47Q08722 323 aa3.74□□□□□ -1.81
MTHFD1-216ENST00000557539 ASAH1Q13510 395 aa3.74□□□□□ -1.81
MTHFD1-216ENST00000557539 AANATQ16613 207 aa3.74□□□□□ -1.81
MTHFD1-216ENST00000557539 ZNF829Q3KNS6 432 aaPredicted RBP3.74□□□□□ -1.81
MTHFD1-216ENST00000557539 HSP90AA4PQ58FG1 418 aa3.74□□□□□ -1.81
MTHFD1-216ENST00000557539 BEX5Q5H9J7 111 aa3.74□□□□□ -1.81
MTHFD1-216ENST00000557539 SCARA5Q6ZMJ2 495 aa3.74□□□□□ -1.81
MTHFD1-216ENST00000557539 ZNF571Q7Z3V5 609 aaPredicted RBP3.74□□□□□ -1.81
MTHFD1-216ENST00000557539 PIANPQ8IYJ0 282 aa3.74□□□□□ -1.81
MTHFD1-216ENST00000557539 CMTM1Q8IZ96 169 aa3.74□□□□□ -1.81
MTHFD1-216ENST00000557539 DNAAF3Q8N9W5 541 aa3.74□□□□□ -1.81
MTHFD1-216ENST00000557539 DRAXINQ8NBI3 349 aaPredicted RBP3.74□□□□□ -1.81
MTHFD1-216ENST00000557539 OR5B3Q8NH48 314 aa3.74□□□□□ -1.81
MTHFD1-216ENST00000557539 OR52E5Q8NH55 327 aa3.74□□□□□ -1.81
MTHFD1-216ENST00000557539 CA5BP1Q8WTZ4 195 aa3.74□□□□□ -1.81
MTHFD1-216ENST00000557539 RAB1CQ92928 201 aa3.74□□□□□ -1.81
MTHFD1-216ENST00000557539 TMIGD2Q96BF3 282 aa3.74□□□□□ -1.81
MTHFD1-216ENST00000557539 XPO6Q96QU8 1125 aaKnown RBP3.74□□□□□ -1.81
MTHFD1-216ENST00000557539 TMEM246Q9BRR3 403 aa3.74□□□□□ -1.81
MTHFD1-216ENST00000557539 TRIM51Q9BSJ1 452 aa3.74□□□□□ -1.81
MTHFD1-216ENST00000557539 NAT9Q9BTE0 207 aa3.74□□□□□ -1.81
MTHFD1-216ENST00000557539 BEX1Q9HBH7 125 aa3.74□□□□□ -1.81
MTHFD1-216ENST00000557539 TMEM165Q9HC07 324 aa3.74□□□□□ -1.81
MTHFD1-216ENST00000557539 DYRK4Q9NR20 520 aa3.74□□□□□ -1.81
MTHFD1-216ENST00000557539 UXTQ9UBK9 157 aaPredicted RBP3.74□□□□□ -1.81
MTHFD1-216ENST00000557539 DDX19BQ9UMR2 479 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms