RNA–Protein interactions for RNA: ENST00000555958.5

ATXN3-234, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 857 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-234ENST00000555958 SNX1Q13596 522 aa3.14□□□□□ -1.91
ATXN3-234ENST00000555958 KLF5Q13887 457 aaPredicted RBP3.14□□□□□ -1.91
ATXN3-234ENST00000555958 SERTAD2Q14140 314 aa3.14□□□□□ -1.91
ATXN3-234ENST00000555958 CD226Q15762 336 aa3.14□□□□□ -1.91
ATXN3-234ENST00000555958 CARTPTQ16568 116 aa3.14□□□□□ -1.91
ATXN3-234ENST00000555958 SMU1Q2TAY7 513 aa3.14□□□□□ -1.91
ATXN3-234ENST00000555958 BEX5Q5H9J7 111 aa3.14□□□□□ -1.91
ATXN3-234ENST00000555958 LIPNQ5VXI9 398 aa3.14□□□□□ -1.91
ATXN3-234ENST00000555958 SASS6Q6UVJ0 657 aa3.14□□□□□ -1.91
ATXN3-234ENST00000555958 STAC2Q6ZMT1 411 aa3.14□□□□□ -1.91
ATXN3-234ENST00000555958 KATNAL2Q8IYT4 538 aa3.14□□□□□ -1.91
ATXN3-234ENST00000555958 MORN4Q8NDC4 146 aa3.14□□□□□ -1.91
ATXN3-234ENST00000555958 OR5L2Q8NGL0 311 aa3.14□□□□□ -1.91
ATXN3-234ENST00000555958 OR1J4Q8NGS1 313 aa3.14□□□□□ -1.91
ATXN3-234ENST00000555958 SGMS2Q8NHU3 365 aa3.14□□□□□ -1.91
ATXN3-234ENST00000555958 FNDC9Q8TBE3 224 aa3.14□□□□□ -1.91
ATXN3-234ENST00000555958 CD200R1Q8TD46 325 aa3.14□□□□□ -1.91
ATXN3-234ENST00000555958 S100PBPQ96BU1 408 aa3.14□□□□□ -1.91
ATXN3-234ENST00000555958 MS4A6EQ96DS6 147 aa3.14□□□□□ -1.91
ATXN3-234ENST00000555958 NAP1L3Q99457 506 aaPredicted RBP3.14□□□□□ -1.91
ATXN3-234ENST00000555958 SDHCQ99643 169 aaPredicted RBP3.14□□□□□ -1.91
ATXN3-234ENST00000555958 CACNG6Q9BXT2 260 aa3.14□□□□□ -1.91
ATXN3-234ENST00000555958 OSBPL8Q9BZF1 889 aa3.14□□□□□ -1.91
ATXN3-234ENST00000555958 ACTR6Q9GZN1 396 aa3.14□□□□□ -1.91
ATXN3-234ENST00000555958 TREX1Q9NSU2 369 aa3.14□□□□□ -1.91
ATXN3-234ENST00000555958 CHMP5Q9NZZ3 219 aa3.14□□□□□ -1.91
ATXN3-234ENST00000555958 PACSIN2Q9UNF0 486 aaPredicted RBP3.14□□□□□ -1.91
ATXN3-234ENST00000555958 MMACHCQ9Y4U1 282 aa3.14□□□□□ -1.91
ATXN3-234ENST00000555958 BZW2Q9Y6E2 419 aaKnown RBP3.14□□□□□ -1.91
ATXN3-234ENST00000555958 LRIT2A6NDA9 550 aa3.13□□□□□ -1.91
ATXN3-234ENST00000555958 DPRXA6NFQ7 191 aa3.13□□□□□ -1.91
ATXN3-234ENST00000555958 SLC22A20A6NK97 555 aa3.13□□□□□ -1.91
ATXN3-234ENST00000555958 SH2D1BO14796 132 aa3.13□□□□□ -1.91
ATXN3-234ENST00000555958 CTNSO60931 367 aa3.13□□□□□ -1.91
ATXN3-234ENST00000555958 ICOSLGO75144 302 aa3.13□□□□□ -1.91
ATXN3-234ENST00000555958 EEDO75530 441 aaKnown RBP3.13□□□□□ -1.91
ATXN3-234ENST00000555958 AQP8O94778 261 aa3.13□□□□□ -1.91
ATXN3-234ENST00000555958 IFNB1P01574 187 aa3.13□□□□□ -1.91
ATXN3-234ENST00000555958 IGKV3-11P04433 115 aa3.13□□□□□ -1.91
ATXN3-234ENST00000555958 APRTP07741 180 aa3.13□□□□□ -1.91
ATXN3-234ENST00000555958 CT62P0C5K7 136 aa3.13□□□□□ -1.91
ATXN3-234ENST00000555958 SRP14P37108 136 aaKnown RBP3.13□□□□□ -1.91
ATXN3-234ENST00000555958 MTTPP55157 894 aa3.13□□□□□ -1.91
ATXN3-234ENST00000555958 CDKN2DP55273 166 aa3.13□□□□□ -1.91
ATXN3-234ENST00000555958 HSD17B7P56937 341 aa3.13□□□□□ -1.91
ATXN3-234ENST00000555958 HERV-K104P63124 156 aa3.13□□□□□ -1.91
ATXN3-234ENST00000555958 REEP5Q00765 189 aa3.13□□□□□ -1.91
ATXN3-234ENST00000555958 RCN2Q14257 317 aa3.13□□□□□ -1.91
ATXN3-234ENST00000555958 GK2Q14410 553 aaPredicted RBP3.13□□□□□ -1.91
ATXN3-234ENST00000555958 EBPQ15125 230 aaKnown RBP3.13□□□□□ -1.91
ATXN3-234ENST00000555958 CCDC92Q53HC0 331 aaPredicted RBP3.13□□□□□ -1.91
ATXN3-234ENST00000555958 TIGD3Q6B0B8 471 aa3.13□□□□□ -1.91
ATXN3-234ENST00000555958 ZNF470Q6ECI4 717 aa3.13□□□□□ -1.91
ATXN3-234ENST00000555958 CLEC2AQ6UVW9 174 aa3.13□□□□□ -1.91
ATXN3-234ENST00000555958 PIWIL3Q7Z3Z3 882 aaKnown RBP3.13□□□□□ -1.91
ATXN3-234ENST00000555958 C10orf105Q8TEF2 133 aa3.13□□□□□ -1.91
ATXN3-234ENST00000555958 C1orf54Q8WWF1 131 aa3.13□□□□□ -1.91
ATXN3-234ENST00000555958 SLC5A11Q8WWX8 675 aa3.13□□□□□ -1.91
ATXN3-234ENST00000555958 SLC39A3Q9BRY0 314 aa3.13□□□□□ -1.91
ATXN3-234ENST00000555958 METTL17Q9H7H0 456 aaPredicted RBP3.13□□□□□ -1.91
ATXN3-234ENST00000555958 METTL7AQ9H8H3 244 aa3.13□□□□□ -1.91
ATXN3-234ENST00000555958 NHEJ1Q9H9Q4 299 aaPredicted RBP3.13□□□□□ -1.91
ATXN3-234ENST00000555958 NRN1Q9NPD7 142 aa3.13□□□□□ -1.91
ATXN3-234ENST00000555958 ESM1Q9NQ30 184 aa3.13□□□□□ -1.91
ATXN3-234ENST00000555958 ANO10Q9NW15 660 aa3.13□□□□□ -1.91
ATXN3-234ENST00000555958 QPCTLQ9NXS2 382 aa3.13□□□□□ -1.91
ATXN3-234ENST00000555958 CNIH4Q9P003 139 aa3.13□□□□□ -1.91
ATXN3-234ENST00000555958 DPM3Q9P2X0 92 aa3.13□□□□□ -1.91
ATXN3-234ENST00000555958 COPS7AQ9UBW8 275 aa3.13□□□□□ -1.91
ATXN3-234ENST00000555958 SLC22A14Q9Y267 594 aa3.13□□□□□ -1.91
ATXN3-234ENST00000555958 EPPK1P58107 5090 aaKnown RBP3.12□□□□□ -1.91
ATXN3-234ENST00000555958 UQCRHLA0A096LP55 91 aa3.12□□□□□ -1.91
ATXN3-234ENST00000555958 IQANK1A0A1B0GTG1 560 aa3.12□□□□□ -1.91
ATXN3-234ENST00000555958 NCF1BA6NI72 391 aaPredicted RBP3.12□□□□□ -1.91
ATXN3-234ENST00000555958 NCF1CA8MVU1 366 aaPredicted RBP3.12□□□□□ -1.91
ATXN3-234ENST00000555958 E7EQL1 145 aa3.12□□□□□ -1.91
ATXN3-234ENST00000555958 CDC7O00311 574 aa3.12□□□□□ -1.91
ATXN3-234ENST00000555958 EI24O14681 340 aa3.12□□□□□ -1.91
ATXN3-234ENST00000555958 UGT2B11O75310 529 aa3.12□□□□□ -1.91
ATXN3-234ENST00000555958 PDE5AO76074 875 aa3.12□□□□□ -1.91
ATXN3-234ENST00000555958 SLC2A10O95528 541 aa3.12□□□□□ -1.91
ATXN3-234ENST00000555958 ACTL6AO96019 429 aa3.12□□□□□ -1.91
ATXN3-234ENST00000555958 SERPINA6P08185 405 aa3.12□□□□□ -1.91
ATXN3-234ENST00000555958 MPC1LP0DKB6 136 aa3.12□□□□□ -1.91
ATXN3-234ENST00000555958 NCF1P14598 390 aaPredicted RBP3.12□□□□□ -1.91
ATXN3-234ENST00000555958 ZNF708P17019 499 aa3.12□□□□□ -1.91
ATXN3-234ENST00000555958 USF1P22415 310 aaPredicted RBP3.12□□□□□ -1.91
ATXN3-234ENST00000555958 SLC1A2P43004 574 aa3.12□□□□□ -1.91
ATXN3-234ENST00000555958 SLC1A1P43005 524 aa3.12□□□□□ -1.91
ATXN3-234ENST00000555958 CKAP4Q07065 602 aaKnown RBP3.12□□□□□ -1.91
ATXN3-234ENST00000555958 FUT7Q11130 342 aa3.12□□□□□ -1.91
ATXN3-234ENST00000555958 MORF4L2Q15014 288 aa3.12□□□□□ -1.91
ATXN3-234ENST00000555958 EXOSC7Q15024 291 aaKnown RBP3.12□□□□□ -1.91
ATXN3-234ENST00000555958 PON3Q15166 354 aa3.12□□□□□ -1.91
ATXN3-234ENST00000555958 TRIP13Q15645 432 aaPredicted RBP3.12□□□□□ -1.91
ATXN3-234ENST00000555958 STK11Q15831 433 aa3.12□□□□□ -1.91
ATXN3-234ENST00000555958 NCMAPQ5T1S8 102 aa3.12□□□□□ -1.91
ATXN3-234ENST00000555958 PRAMEF8Q5VWM4 474 aa3.12□□□□□ -1.91
ATXN3-234ENST00000555958 TRIM40Q6P9F5 258 aa3.12□□□□□ -1.91
ATXN3-234ENST00000555958 B3GLCTQ6Y288 498 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms