RNA–Protein interactions for RNA: ENST00000554976.5

TDP1-210, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 3,040 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-210ENST00000554976 WISP2O76076 250 aa7.81□□□□□ -1.16
TDP1-210ENST00000554976 MMP7P09237 267 aaPredicted RBP7.81□□□□□ -1.16
TDP1-210ENST00000554976 BTCP35070 178 aa7.81□□□□□ -1.16
TDP1-210ENST00000554976 DDOSTP39656 456 aa7.81□□□□□ -1.16
TDP1-210ENST00000554976 MMP15P51511 669 aa7.81□□□□□ -1.16
TDP1-210ENST00000554976 C1orf100Q5SVJ3 147 aa7.81□□□□□ -1.16
TDP1-210ENST00000554976 BCL2L15Q5TBC7 163 aa7.81□□□□□ -1.16
TDP1-210ENST00000554976 IGFL3Q6UXB1 125 aa7.81□□□□□ -1.16
TDP1-210ENST00000554976 ZNF813Q6ZN06 617 aa7.81□□□□□ -1.16
TDP1-210ENST00000554976 SIAH3Q8IW03 269 aa7.81□□□□□ -1.16
TDP1-210ENST00000554976 FGFBP3Q8TAT2 258 aa7.81□□□□□ -1.16
TDP1-210ENST00000554976 SOX7Q9BT81 388 aa7.81□□□□□ -1.16
TDP1-210ENST00000554976 ULBP2Q9BZM5 246 aa7.81□□□□□ -1.16
TDP1-210ENST00000554976 SEC61A2Q9H9S3 476 aa7.81□□□□□ -1.16
TDP1-210ENST00000554976 PLEKHA1Q9HB21 404 aa7.81□□□□□ -1.16
TDP1-210ENST00000554976 STEAP1Q9UHE8 339 aa7.81□□□□□ -1.16
TDP1-210ENST00000554976 DHDHQ9UQ10 334 aa7.81□□□□□ -1.16
TDP1-210ENST00000554976 DOK2O60496 412 aa7.81□□□□□ -1.16
TDP1-210ENST00000554976 OR3A3P47888 321 aa7.81□□□□□ -1.16
TDP1-210ENST00000554976 PITPNBP48739 271 aa7.81□□□□□ -1.16
TDP1-210ENST00000554976 CX3CR1P49238 355 aa7.81□□□□□ -1.16
TDP1-210ENST00000554976 ZNF121P58317 390 aaPredicted RBP7.81□□□□□ -1.16
TDP1-210ENST00000554976 PDSS1Q5T2R2 415 aa7.81□□□□□ -1.16
TDP1-210ENST00000554976 TMEM244Q5VVB8 128 aa7.81□□□□□ -1.16
TDP1-210ENST00000554976 Q8N402 240 aa7.81□□□□□ -1.16
TDP1-210ENST00000554976 POC5Q8NA72 575 aa7.81□□□□□ -1.16
TDP1-210ENST00000554976 OR51A2Q8NGJ7 313 aa7.81□□□□□ -1.16
TDP1-210ENST00000554976 OR6N1Q8NGY5 312 aa7.81□□□□□ -1.16
TDP1-210ENST00000554976 LHFPL5Q8TAF8 219 aa7.81□□□□□ -1.16
TDP1-210ENST00000554976 ADAT3Q96EY9 351 aaPredicted RBP7.81□□□□□ -1.16
TDP1-210ENST00000554976 NEDD4LQ96PU5 975 aa7.81□□□□□ -1.16
TDP1-210ENST00000554976 C11orf54Q9H0W9 315 aaPredicted RBP7.81□□□□□ -1.16
TDP1-210ENST00000554976 CRLF2Q9HC73 371 aa7.81□□□□□ -1.16
TDP1-210ENST00000554976 TCF7L1Q9HCS4 588 aa7.81□□□□□ -1.16
TDP1-210ENST00000554976 PAQR5Q9NXK6 330 aaPredicted RBP7.81□□□□□ -1.16
TDP1-210ENST00000554976 MALT1Q9UDY8 824 aa7.81□□□□□ -1.16
TDP1-210ENST00000554976 HHLA2Q9UM44 414 aa7.81□□□□□ -1.16
TDP1-210ENST00000554976 CAMK2AQ9UQM7 478 aa7.81□□□□□ -1.16
TDP1-210ENST00000554976 V9GYS6 101 aa7.81□□□□□ -1.16
TDP1-210ENST00000554976 CELSR3Q9NYQ7 3312 aa7.8□□□□□ -1.16
TDP1-210ENST00000554976 LOC400499M0QZD8 3231 aa7.8□□□□□ -1.16
TDP1-210ENST00000554976 ALPK2Q86TB3 2170 aa7.8□□□□□ -1.16
TDP1-210ENST00000554976 FAM25AB3EWG3 89 aa7.8□□□□□ -1.16
TDP1-210ENST00000554976 FAM25CB3EWG5 89 aa7.8□□□□□ -1.16
TDP1-210ENST00000554976 FAM25GB3EWG6 89 aa7.8□□□□□ -1.16
TDP1-210ENST00000554976 UBL3O95164 117 aa7.8□□□□□ -1.16
TDP1-210ENST00000554976 PTH2RP49190 550 aa7.8□□□□□ -1.16
TDP1-210ENST00000554976 QRFPP83859 136 aa7.8□□□□□ -1.16
TDP1-210ENST00000554976 IL18Q14116 193 aa7.8□□□□□ -1.16
TDP1-210ENST00000554976 PYDC2Q56P42 97 aa7.8□□□□□ -1.16
TDP1-210ENST00000554976 ELFN2Q5R3F8 820 aa7.8□□□□□ -1.16
TDP1-210ENST00000554976 AAED1Q7RTV5 226 aa7.8□□□□□ -1.16
TDP1-210ENST00000554976 TMEM178AQ8NBL3 297 aa7.8□□□□□ -1.16
TDP1-210ENST00000554976 OR2AJ1Q8NGZ0 328 aa7.8□□□□□ -1.16
TDP1-210ENST00000554976 YIPF5Q969M3 257 aa7.8□□□□□ -1.16
TDP1-210ENST00000554976 NARFLQ9H6Q4 476 aa7.8□□□□□ -1.16
TDP1-210ENST00000554976 BRD7Q9NPI1 651 aa7.8□□□□□ -1.16
TDP1-210ENST00000554976 NPAP1Q9NZP6 1156 aa7.8□□□□□ -1.16
TDP1-210ENST00000554976 SLC17A2O00624 439 aa7.8□□□□□ -1.16
TDP1-210ENST00000554976 MAS1P04201 325 aa7.8□□□□□ -1.16
TDP1-210ENST00000554976 ARG2P78540 354 aa7.8□□□□□ -1.16
TDP1-210ENST00000554976 PMP22Q01453 160 aa7.8□□□□□ -1.16
TDP1-210ENST00000554976 TSPO2Q5TGU0 170 aa7.8□□□□□ -1.16
TDP1-210ENST00000554976 PYHIN1Q6K0P9 492 aa7.8□□□□□ -1.16
TDP1-210ENST00000554976 BAIAP2L2Q6UXY1 529 aa7.8□□□□□ -1.16
TDP1-210ENST00000554976 NRARPQ7Z6K4 114 aa7.8□□□□□ -1.16
TDP1-210ENST00000554976 NAA40Q86UY6 237 aa7.8□□□□□ -1.16
TDP1-210ENST00000554976 MEIOBQ8N635 442 aa7.8□□□□□ -1.16
TDP1-210ENST00000554976 DTX3Q8N9I9 347 aa7.8□□□□□ -1.16
TDP1-210ENST00000554976 GJC3Q8NFK1 279 aa7.8□□□□□ -1.16
TDP1-210ENST00000554976 OR13C3Q8NGS6 347 aa7.8□□□□□ -1.16
TDP1-210ENST00000554976 OR14K1Q8NGZ2 314 aa7.8□□□□□ -1.16
TDP1-210ENST00000554976 TSEN15Q8WW01 171 aaKnown RBP7.8□□□□□ -1.16
TDP1-210ENST00000554976 HAVCR1Q96D42 359 aa7.8□□□□□ -1.16
TDP1-210ENST00000554976 CENPMQ9NSP4 180 aa7.8□□□□□ -1.16
TDP1-210ENST00000554976 KLK13Q9UKR3 277 aa7.8□□□□□ -1.16
TDP1-210ENST00000554976 AKAP13Q12802 2813 aa7.8□□□□□ -1.16
TDP1-210ENST00000554976 DCHS1Q96JQ0 3298 aa7.8□□□□□ -1.16
TDP1-210ENST00000554976 CFAP47Q6ZTR5 3102 aa7.79□□□□□ -1.16
TDP1-210ENST00000554976 A0A0U1RQV5 110 aa7.79□□□□□ -1.16
TDP1-210ENST00000554976 H3BSH0 61 aa7.79□□□□□ -1.16
TDP1-210ENST00000554976 TMIGD3P0DMS9 266 aaPredicted RBP7.79□□□□□ -1.16
TDP1-210ENST00000554976 CCL11P51671 97 aa7.79□□□□□ -1.16
TDP1-210ENST00000554976 CLDN12P56749 244 aa7.79□□□□□ -1.16
TDP1-210ENST00000554976 PLGLB1Q02325 96 aa7.79□□□□□ -1.16
TDP1-210ENST00000554976 SLC10A1Q14973 349 aa7.79□□□□□ -1.16
TDP1-210ENST00000554976 RAB35Q15286 201 aa7.79□□□□□ -1.16
TDP1-210ENST00000554976 C3AR1Q16581 482 aa7.79□□□□□ -1.16
TDP1-210ENST00000554976 RSBN1Q5VWQ0 802 aaPredicted RBP7.79□□□□□ -1.16
TDP1-210ENST00000554976 ZNF544Q6NX49 715 aa7.79□□□□□ -1.16
TDP1-210ENST00000554976 TUSC5Q8IXB3 177 aa7.79□□□□□ -1.16
TDP1-210ENST00000554976 OR8H2Q8N162 312 aa7.79□□□□□ -1.16
TDP1-210ENST00000554976 CELF2-AS1Q8N7Q2 184 aa7.79□□□□□ -1.16
TDP1-210ENST00000554976 DUSP18Q8NEJ0 188 aa7.79□□□□□ -1.16
TDP1-210ENST00000554976 ZNF775Q96BV0 537 aaPredicted RBP7.79□□□□□ -1.16
TDP1-210ENST00000554976 ALKBH3Q96Q83 286 aaPredicted RBP7.79□□□□□ -1.16
TDP1-210ENST00000554976 CLCF1Q9UBD9 225 aa7.79□□□□□ -1.16
TDP1-210ENST00000554976 ZNF221Q9UK13 617 aa7.79□□□□□ -1.16
TDP1-210ENST00000554976 A0A0B4J293 547 aa7.79□□□□□ -1.16
TDP1-210ENST00000554976 A6NIN4 97 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms