RNA–Protein interactions for RNA: ENST00000553923.1

SRP54-204, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-204ENST00000553923 CBLN2Q8IUK8 224 aa1.71□□□□□ -2.14
SRP54-204ENST00000553923 SLC30A8Q8IWU4 369 aa1.71□□□□□ -2.14
SRP54-204ENST00000553923 FBXO16Q8IX29 292 aaPredicted RBP1.71□□□□□ -2.14
SRP54-204ENST00000553923 C6orf223Q8N319 242 aa1.71□□□□□ -2.14
SRP54-204ENST00000553923 ZADH2Q8N4Q0 377 aa1.71□□□□□ -2.14
SRP54-204ENST00000553923 TMEM252Q8N6L7 170 aa1.71□□□□□ -2.14
SRP54-204ENST00000553923 ZNF740Q8NDX6 193 aa1.71□□□□□ -2.14
SRP54-204ENST00000553923 ZNF738Q8NE65 137 aa1.71□□□□□ -2.14
SRP54-204ENST00000553923 VN1R2Q8NFZ6 395 aa1.71□□□□□ -2.14
SRP54-204ENST00000553923 OR8G5Q8NG78 346 aa1.71□□□□□ -2.14
SRP54-204ENST00000553923 OR4F15Q8NGB8 312 aa1.71□□□□□ -2.14
SRP54-204ENST00000553923 OR52E2Q8NGJ4 325 aa1.71□□□□□ -2.14
SRP54-204ENST00000553923 OR51G1Q8NGK1 321 aa1.71□□□□□ -2.14
SRP54-204ENST00000553923 OR2A1Q8NGT9 310 aa1.71□□□□□ -2.14
SRP54-204ENST00000553923 OR2T29Q8NH02 315 aa1.71□□□□□ -2.14
SRP54-204ENST00000553923 CT45A3Q8NHU0 189 aa1.71□□□□□ -2.14
SRP54-204ENST00000553923 RNASEH2CQ8TDP1 164 aaKnown RBP1.71□□□□□ -2.14
SRP54-204ENST00000553923 DOK4Q8TEW6 326 aa1.71□□□□□ -2.14
SRP54-204ENST00000553923 AGAP11Q8TF27 550 aa1.71□□□□□ -2.14
SRP54-204ENST00000553923 ITLN1Q8WWA0 313 aa1.71□□□□□ -2.14
SRP54-204ENST00000553923 GEMIN6Q8WXD5 167 aaKnown RBP1.71□□□□□ -2.14
SRP54-204ENST00000553923 CHCHD10Q8WYQ3 142 aaPredicted RBP1.71□□□□□ -2.14
SRP54-204ENST00000553923 FRAT1Q92837 279 aaPredicted RBP1.71□□□□□ -2.14
SRP54-204ENST00000553923 TMEM230Q96A57 120 aa1.71□□□□□ -2.14
SRP54-204ENST00000553923 FAM3DQ96BQ1 224 aa1.71□□□□□ -2.14
SRP54-204ENST00000553923 RCN3Q96D15 328 aa1.71□□□□□ -2.14
SRP54-204ENST00000553923 COL21A1Q96P44 957 aa1.71□□□□□ -2.14
SRP54-204ENST00000553923 P2RX4Q99571 388 aa1.71□□□□□ -2.14
SRP54-204ENST00000553923 GABRG3Q99928 467 aa1.71□□□□□ -2.14
SRP54-204ENST00000553923 SHCBP1LQ9BZQ2 653 aa1.71□□□□□ -2.14
SRP54-204ENST00000553923 API5Q9BZZ5 524 aaKnown RBP1.71□□□□□ -2.14
SRP54-204ENST00000553923 SELENOIQ9C0D9 397 aa1.71□□□□□ -2.14
SRP54-204ENST00000553923 ZBP1Q9H171 429 aa1.71□□□□□ -2.14
SRP54-204ENST00000553923 OR51J1Q9H342 316 aa1.71□□□□□ -2.14
SRP54-204ENST00000553923 CLMPQ9H6B4 373 aa1.71□□□□□ -2.14
SRP54-204ENST00000553923 LRRC19Q9H756 370 aa1.71□□□□□ -2.14
SRP54-204ENST00000553923 ZNF442Q9H7R0 627 aa1.71□□□□□ -2.14
SRP54-204ENST00000553923 UCK1Q9HA47 277 aa1.71□□□□□ -2.14
SRP54-204ENST00000553923 PLGRKTQ9HBL7 147 aa1.71□□□□□ -2.14
SRP54-204ENST00000553923 FBXO8Q9NRD0 319 aa1.71□□□□□ -2.14
SRP54-204ENST00000553923 IMP3Q9NV31 184 aaKnown RBP1.71□□□□□ -2.14
SRP54-204ENST00000553923 NLE1Q9NVX2 485 aaPredicted RBP1.71□□□□□ -2.14
SRP54-204ENST00000553923 NYAP2Q9P242 653 aa1.71□□□□□ -2.14
SRP54-204ENST00000553923 DPM3Q9P2X0 92 aa1.71□□□□□ -2.14
SRP54-204ENST00000553923 BTNL2Q9UIR0 455 aa1.71□□□□□ -2.14
SRP54-204ENST00000553923 NAGKQ9UJ70 344 aa1.71□□□□□ -2.14
SRP54-204ENST00000553923 C3orf18Q9UK00 162 aa1.71□□□□□ -2.14
SRP54-204ENST00000553923 ASF1AQ9Y294 204 aa1.71□□□□□ -2.14
SRP54-204ENST00000553923 UGT2A1Q9Y4X1 527 aa1.71□□□□□ -2.14
SRP54-204ENST00000553923 POLR3HQ9Y535 204 aaPredicted RBP1.71□□□□□ -2.14
SRP54-204ENST00000553923 SLC25A15Q9Y619 301 aa1.71□□□□□ -2.14
SRP54-204ENST00000553923 ABCB11O95342 1321 aa1.7□□□□□ -2.14
SRP54-204ENST00000553923 A0A0A6YYD5 115 aa1.7□□□□□ -2.14
SRP54-204ENST00000553923 IGKV1D-13A0A0B4J2D9 117 aa1.7□□□□□ -2.14
SRP54-204ENST00000553923 ANKRD20A5PA0PJZ0 165 aa1.7□□□□□ -2.14
SRP54-204ENST00000553923 SMIM23A6NLE4 172 aa1.7□□□□□ -2.14
SRP54-204ENST00000553923 ZNF726A6NNF4 738 aa1.7□□□□□ -2.14
SRP54-204ENST00000553923 NCBP2LA6PVI3 153 aaKnown RBP1.7□□□□□ -2.14
SRP54-204ENST00000553923 ERVV-1B6SEH8 477 aa1.7□□□□□ -2.14
SRP54-204ENST00000553923 ANKRD65E5RJM6 399 aa1.7□□□□□ -2.14
SRP54-204ENST00000553923 H7C1H1 209 aa1.7□□□□□ -2.14
SRP54-204ENST00000553923 XKRYO14609 159 aa1.7□□□□□ -2.14
SRP54-204ENST00000553923 RAD51BO15315 384 aa1.7□□□□□ -2.14
SRP54-204ENST00000553923 HDAC3O15379 428 aa1.7□□□□□ -2.14
SRP54-204ENST00000553923 EMC8O43402 210 aa1.7□□□□□ -2.14
SRP54-204ENST00000553923 ZNF253O75346 499 aa1.7□□□□□ -2.14
SRP54-204ENST00000553923 SRP72O76094 671 aaKnown RBP1.7□□□□□ -2.14
SRP54-204ENST00000553923 ACTL6AO96019 429 aa1.7□□□□□ -2.14
SRP54-204ENST00000553923 HPRT1P00492 218 aa1.7□□□□□ -2.14
SRP54-204ENST00000553923 CSF3P09919 207 aa1.7□□□□□ -2.14
SRP54-204ENST00000553923 GKN3PP0CG01 181 aa1.7□□□□□ -2.14
SRP54-204ENST00000553923 IGKV1-13P0DP09 117 aa1.7□□□□□ -2.14
SRP54-204ENST00000553923 GFAPP14136 432 aa1.7□□□□□ -2.14
SRP54-204ENST00000553923 IGLL1P15814 213 aa1.7□□□□□ -2.14
SRP54-204ENST00000553923 CNR1P21554 472 aa1.7□□□□□ -2.14
SRP54-204ENST00000553923 USF1P22415 310 aaPredicted RBP1.7□□□□□ -2.14
SRP54-204ENST00000553923 GPX4P36969 197 aaPredicted RBP1.7□□□□□ -2.14
SRP54-204ENST00000553923 PPP1R2P41236 205 aa1.7□□□□□ -2.14
SRP54-204ENST00000553923 MAGEA2P43356 314 aa1.7□□□□□ -2.14
SRP54-204ENST00000553923 PRLHRP49683 370 aa1.7□□□□□ -2.14
SRP54-204ENST00000553923 RGS6P49758 472 aa1.7□□□□□ -2.14
SRP54-204ENST00000553923 PRELPP51888 382 aa1.7□□□□□ -2.14
SRP54-204ENST00000553923 EMP2P54851 167 aa1.7□□□□□ -2.14
SRP54-204ENST00000553923 PRPS1P60891 318 aa1.7□□□□□ -2.14
SRP54-204ENST00000553923 SEMG2Q02383 582 aa1.7□□□□□ -2.14
SRP54-204ENST00000553923 MXD1Q05195 221 aa1.7□□□□□ -2.14
SRP54-204ENST00000553923 BNIP2Q12982 314 aa1.7□□□□□ -2.14
SRP54-204ENST00000553923 ASAH1Q13510 395 aa1.7□□□□□ -2.14
SRP54-204ENST00000553923 AQP6Q13520 282 aa1.7□□□□□ -2.14
SRP54-204ENST00000553923 PRPSAP1Q14558 356 aa1.7□□□□□ -2.14
SRP54-204ENST00000553923 TRAM1Q15629 374 aa1.7□□□□□ -2.14
SRP54-204ENST00000553923 TRIP13Q15645 432 aaPredicted RBP1.7□□□□□ -2.14
SRP54-204ENST00000553923 LRRC36Q1X8D7 754 aa1.7□□□□□ -2.14
SRP54-204ENST00000553923 BSXQ3C1V8 233 aa1.7□□□□□ -2.14
SRP54-204ENST00000553923 TFDP3Q5H9I0 405 aa1.7□□□□□ -2.14
SRP54-204ENST00000553923 KLF17Q5JT82 389 aaPredicted RBP1.7□□□□□ -2.14
SRP54-204ENST00000553923 VAX1Q5SQQ9 334 aa1.7□□□□□ -2.14
SRP54-204ENST00000553923 SAPCD1Q5SSQ6 148 aa1.7□□□□□ -2.14
SRP54-204ENST00000553923 FAM27D1Q5T7N8 215 aa1.7□□□□□ -2.14
SRP54-204ENST00000553923 ZNF658Q5TYW1 1059 aaPredicted RBP1.7□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms