RNA–Protein interactions for RNA: ENST00000553039.1

CKAP4-203, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 4

Gene CKAP4, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-203ENST00000553039 PSMA8Q8TAA3 256 aa4.2□□□□□ -1.74
CKAP4-203ENST00000553039 SLC25A40Q8TBP6 338 aa4.2□□□□□ -1.74
CKAP4-203ENST00000553039 SFXN5Q8TD22 340 aa4.2□□□□□ -1.74
CKAP4-203ENST00000553039 C10orf82Q8WW14 230 aa4.2□□□□□ -1.74
CKAP4-203ENST00000553039 ITLN1Q8WWA0 313 aa4.2□□□□□ -1.74
CKAP4-203ENST00000553039 XAGE5Q8WWM1 108 aa4.2□□□□□ -1.74
CKAP4-203ENST00000553039 ST8SIA2Q92186 375 aa4.2□□□□□ -1.74
CKAP4-203ENST00000553039 EGLN2Q96KS0 407 aa4.2□□□□□ -1.74
CKAP4-203ENST00000553039 CMTM3Q96MX0 182 aa4.2□□□□□ -1.74
CKAP4-203ENST00000553039 TECTBQ96PL2 329 aa4.2□□□□□ -1.74
CKAP4-203ENST00000553039 NKX3-1Q99801 234 aaPredicted RBP4.2□□□□□ -1.74
CKAP4-203ENST00000553039 CDCA4Q9BXL8 241 aa4.2□□□□□ -1.74
CKAP4-203ENST00000553039 OR2J1Q9GZK6 312 aa4.2□□□□□ -1.74
CKAP4-203ENST00000553039 SIRPDQ9H106 197 aa4.2□□□□□ -1.74
CKAP4-203ENST00000553039 MTHFD2LQ9H903 347 aaPredicted RBP4.2□□□□□ -1.74
CKAP4-203ENST00000553039 ATAD3AQ9NVI7 634 aa4.2□□□□□ -1.74
CKAP4-203ENST00000553039 TBCCD1Q9NVR7 557 aa4.2□□□□□ -1.74
CKAP4-203ENST00000553039 ZNF224Q9NZL3 707 aa4.2□□□□□ -1.74
CKAP4-203ENST00000553039 ZKSCAN7Q9P0L1 754 aaPredicted RBP4.2□□□□□ -1.74
CKAP4-203ENST00000553039 B3GAT1Q9P2W7 334 aa4.2□□□□□ -1.74
CKAP4-203ENST00000553039 ADAM18Q9Y3Q7 739 aa4.2□□□□□ -1.74
CKAP4-203ENST00000553039 SMAD5-AS1Q9Y6J3 95 aa4.2□□□□□ -1.74
CKAP4-203ENST00000553039 A0A1W2PPM1 405 aa4.19□□□□□ -1.74
CKAP4-203ENST00000553039 H3BUX3 64 aa4.19□□□□□ -1.74
CKAP4-203ENST00000553039 COPEO14579 308 aa4.19□□□□□ -1.74
CKAP4-203ENST00000553039 LDLRAD4O15165 306 aa4.19□□□□□ -1.74
CKAP4-203ENST00000553039 TYROBPO43914 113 aa4.19□□□□□ -1.74
CKAP4-203ENST00000553039 CRCPO75575 148 aa4.19□□□□□ -1.74
CKAP4-203ENST00000553039 OPN1SWP03999 348 aa4.19□□□□□ -1.74
CKAP4-203ENST00000553039 NQO1P15559 274 aaKnown RBP4.19□□□□□ -1.74
CKAP4-203ENST00000553039 IL7RP16871 459 aa4.19□□□□□ -1.74
CKAP4-203ENST00000553039 IMPDH1P20839 514 aa4.19□□□□□ -1.74
CKAP4-203ENST00000553039 MYF6P23409 242 aa4.19□□□□□ -1.74
CKAP4-203ENST00000553039 MPV17P39210 176 aa4.19□□□□□ -1.74
CKAP4-203ENST00000553039 CSNK1A1P48729 337 aa4.19□□□□□ -1.74
CKAP4-203ENST00000553039 VEGFCP49767 419 aa4.19□□□□□ -1.74
CKAP4-203ENST00000553039 SERPINB8P50452 374 aa4.19□□□□□ -1.74
CKAP4-203ENST00000553039 PPP1CBP62140 327 aa4.19□□□□□ -1.74
CKAP4-203ENST00000553039 HPCAP84074 193 aa4.19□□□□□ -1.74
CKAP4-203ENST00000553039 ACSM1Q08AH1 577 aa4.19□□□□□ -1.74
CKAP4-203ENST00000553039 BNIP2Q12982 314 aa4.19□□□□□ -1.74
CKAP4-203ENST00000553039 PSG7Q13046 419 aa4.19□□□□□ -1.74
CKAP4-203ENST00000553039 DYRK1AQ13627 763 aa4.19□□□□□ -1.74
CKAP4-203ENST00000553039 CHI3L2Q15782 390 aa4.19□□□□□ -1.74
CKAP4-203ENST00000553039 MAPK14Q16539 360 aa4.19□□□□□ -1.74
CKAP4-203ENST00000553039 LY6EQ16553 131 aa4.19□□□□□ -1.74
CKAP4-203ENST00000553039 PDCD4Q53EL6 469 aaKnown RBP4.19□□□□□ -1.74
CKAP4-203ENST00000553039 SPRNQ5BIV9 151 aa4.19□□□□□ -1.74
CKAP4-203ENST00000553039 PHYHD1Q5SRE7 291 aa4.19□□□□□ -1.74
CKAP4-203ENST00000553039 SPATA46Q5T0L3 261 aa4.19□□□□□ -1.74
CKAP4-203ENST00000553039 ANKRD26P1Q6NSI1 321 aa4.19□□□□□ -1.74
CKAP4-203ENST00000553039 ACSM6Q6P461 480 aa4.19□□□□□ -1.74
CKAP4-203ENST00000553039 C5orf46Q6UWT4 87 aa4.19□□□□□ -1.74
CKAP4-203ENST00000553039 RRM2BQ7LG56 351 aa4.19□□□□□ -1.74
CKAP4-203ENST00000553039 Q8N2B8 174 aa4.19□□□□□ -1.74
CKAP4-203ENST00000553039 CADM2Q8N3J6 435 aa4.19□□□□□ -1.74
CKAP4-203ENST00000553039 OR51G2Q8NGK0 314 aa4.19□□□□□ -1.74
CKAP4-203ENST00000553039 OR11L1Q8NGX0 322 aa4.19□□□□□ -1.74
CKAP4-203ENST00000553039 OR13G1Q8NGZ3 307 aa4.19□□□□□ -1.74
CKAP4-203ENST00000553039 ACMSDQ8TDX5 336 aa4.19□□□□□ -1.74
CKAP4-203ENST00000553039 GLMPQ8WWB7 406 aa4.19□□□□□ -1.74
CKAP4-203ENST00000553039 CNOT9Q92600 299 aaKnown RBP4.19□□□□□ -1.74
CKAP4-203ENST00000553039 PTP4A1Q93096 173 aa4.19□□□□□ -1.74
CKAP4-203ENST00000553039 ERGIC1Q969X5 290 aa4.19□□□□□ -1.74
CKAP4-203ENST00000553039 OR2V2Q96R30 315 aa4.19□□□□□ -1.74
CKAP4-203ENST00000553039 CPPED1Q9BRF8 314 aaPredicted RBP4.19□□□□□ -1.74
CKAP4-203ENST00000553039 ZNF350Q9GZX5 532 aa4.19□□□□□ -1.74
CKAP4-203ENST00000553039 NSRP1Q9H0G5 558 aaKnown RBP4.19□□□□□ -1.74
CKAP4-203ENST00000553039 MEGF9Q9H1U4 602 aa4.19□□□□□ -1.74
CKAP4-203ENST00000553039 ARMC7Q9H6L4 198 aa4.19□□□□□ -1.74
CKAP4-203ENST00000553039 SCPEP1Q9HB40 452 aa4.19□□□□□ -1.74
CKAP4-203ENST00000553039 SERTAD4Q9NUC0 356 aa4.19□□□□□ -1.74
CKAP4-203ENST00000553039 THAP1Q9NVV9 213 aa4.19□□□□□ -1.74
CKAP4-203ENST00000553039 C1orf109Q9NX04 203 aa4.19□□□□□ -1.74
CKAP4-203ENST00000553039 TIMM22Q9Y584 194 aa4.19□□□□□ -1.74
CKAP4-203ENST00000553039 C5orf49A4QMS7 147 aa4.18□□□□□ -1.74
CKAP4-203ENST00000553039 GMNCA6NCL1 334 aa4.18□□□□□ -1.74
CKAP4-203ENST00000553039 NPIPB8E9PQR5 432 aa4.18□□□□□ -1.74
CKAP4-203ENST00000553039 MS4A18H0YCH9 400 aa4.18□□□□□ -1.74
CKAP4-203ENST00000553039 H0YHG0 523 aa4.18□□□□□ -1.74
CKAP4-203ENST00000553039 NDUFAB1O14561 156 aa4.18□□□□□ -1.74
CKAP4-203ENST00000553039 TRIAP1O43715 76 aa4.18□□□□□ -1.74
CKAP4-203ENST00000553039 PAGE4O60829 102 aa4.18□□□□□ -1.74
CKAP4-203ENST00000553039 NPIPB7O75200 414 aa4.18□□□□□ -1.74
CKAP4-203ENST00000553039 GLRA3O75311 464 aa4.18□□□□□ -1.74
CKAP4-203ENST00000553039 SPAG7O75391 227 aa4.18□□□□□ -1.74
CKAP4-203ENST00000553039 GLCEO94923 617 aa4.18□□□□□ -1.74
CKAP4-203ENST00000553039 CYB5R3P00387 301 aaPredicted RBP4.18□□□□□ -1.74
CKAP4-203ENST00000553039 GSTA1P08263 222 aa4.18□□□□□ -1.74
CKAP4-203ENST00000553039 SELLP14151 372 aa4.18□□□□□ -1.74
CKAP4-203ENST00000553039 NCF2P19878 526 aaPredicted RBP4.18□□□□□ -1.74
CKAP4-203ENST00000553039 ATP5F1P24539 256 aaPredicted RBP4.18□□□□□ -1.74
CKAP4-203ENST00000553039 HPCAL1P37235 193 aa4.18□□□□□ -1.74
CKAP4-203ENST00000553039 GUCA1AP43080 201 aaPredicted RBP4.18□□□□□ -1.74
CKAP4-203ENST00000553039 RPS5P46782 204 aaKnown RBP4.18□□□□□ -1.74
CKAP4-203ENST00000553039 RGS6P49758 472 aa4.18□□□□□ -1.74
CKAP4-203ENST00000553039 ALDH3A2P51648 485 aa4.18□□□□□ -1.74
CKAP4-203ENST00000553039 UBE2E1P51965 193 aa4.18□□□□□ -1.74
CKAP4-203ENST00000553039 NAA20P61599 178 aa4.18□□□□□ -1.74
CKAP4-203ENST00000553039 EFNB1P98172 346 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms